data_XBN # _chem_comp.id XBN _chem_comp.name "(2~{S})-2-(2-hexylhydrazinyl)-3-oxidanyl-propanoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C9 H20 N2 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-10-27 _chem_comp.pdbx_modified_date 2024-10-25 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 204.267 _chem_comp.one_letter_code ? _chem_comp.three_letter_code XBN _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8WVR _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal XBN C12 C1 C 0 1 N N N N N N -40.019 -4.417 25.027 -3.168 0.961 0.035 C12 XBN 1 XBN C10 C2 C 0 1 N N N N N N -40.856 -2.127 25.581 -3.296 -1.500 0.307 C10 XBN 2 XBN C01 C3 C 0 1 N N N N N N -39.577 -4.960 28.373 6.625 0.306 0.823 C01 XBN 3 XBN C02 C4 C 0 1 N N N N N N -39.810 -3.950 29.492 5.536 0.106 -0.233 C02 XBN 4 XBN C03 C5 C 0 1 N N N N N N -41.265 -3.639 29.709 4.164 0.102 0.444 C03 XBN 5 XBN C04 C6 C 0 1 N N N N N N -41.605 -2.308 28.964 3.075 -0.097 -0.612 C04 XBN 6 XBN C05 C7 C 0 1 N N N N N N -43.138 -2.134 28.892 1.702 -0.101 0.065 C05 XBN 7 XBN C06 C8 C 0 1 N N N N N N -43.744 -3.269 28.032 0.613 -0.300 -0.992 C06 XBN 8 XBN C09 C9 C 0 1 N N S N N N -41.326 -3.576 25.300 -3.087 -0.358 -0.689 C09 XBN 9 XBN N07 N1 N 0 1 N N N N N N -43.346 -3.244 26.581 -0.704 -0.304 -0.342 N07 XBN 10 XBN N08 N2 N 0 1 N N N N N N -42.261 -4.154 26.361 -1.766 -0.492 -1.317 N08 XBN 11 XBN O11 O1 O 0 1 N N N N N N -40.471 -1.654 24.311 -2.377 -1.360 1.392 O11 XBN 12 XBN O13 O2 O 0 1 N N N N N N -39.835 -5.572 25.512 -2.222 1.713 0.029 O13 XBN 13 XBN O14 O3 O 0 1 N N N N N N -39.123 -3.903 24.286 -4.293 1.303 0.682 O14 XBN 14 XBN H102 H1 H 0 0 N N N N N N -40.005 -2.118 26.278 -4.317 -1.468 0.688 H102 XBN 15 XBN H101 H2 H 0 0 N N N N N N -41.676 -1.521 25.994 -3.126 -2.454 -0.193 H101 XBN 16 XBN H011 H3 H 0 0 N N N N N N -38.498 -5.145 28.264 6.468 1.257 1.332 H011 XBN 17 XBN H012 H4 H 0 0 N N N N N N -40.087 -5.903 28.618 6.580 -0.506 1.549 H012 XBN 18 XBN H013 H5 H 0 0 N N N N N N -39.978 -4.561 27.430 7.602 0.308 0.341 H013 XBN 19 XBN H021 H6 H 0 0 N N N N N N -39.396 -4.359 30.425 5.581 0.918 -0.959 H021 XBN 20 XBN H022 H7 H 0 0 N N N N N N -39.286 -3.017 29.237 5.693 -0.845 -0.742 H022 XBN 21 XBN H032 H8 H 0 0 N N N N N N -41.883 -4.456 29.309 4.119 -0.709 1.170 H032 XBN 22 XBN H031 H9 H 0 0 N N N N N N -41.463 -3.523 30.785 4.007 1.054 0.952 H031 XBN 23 XBN H041 H10 H 0 0 N N N N N N -41.165 -1.460 29.509 3.119 0.715 -1.338 H041 XBN 24 XBN H042 H11 H 0 0 N N N N N N -41.192 -2.343 27.945 3.231 -1.048 -1.121 H042 XBN 25 XBN H051 H12 H 0 0 N N N N N N -43.560 -2.177 29.907 1.658 -0.913 0.790 H051 XBN 26 XBN H052 H13 H 0 0 N N N N N N -43.376 -1.161 28.437 1.546 0.850 0.573 H052 XBN 27 XBN H062 H14 H 0 0 N N N N N N -43.422 -4.230 28.458 0.658 0.512 -1.717 H062 XBN 28 XBN H061 H15 H 0 0 N N N N N N -44.840 -3.192 28.087 0.770 -1.251 -1.500 H061 XBN 29 XBN H091 H16 H 0 0 N N N N N N -41.886 -3.552 24.354 -3.860 -0.399 -1.457 H091 XBN 30 XBN H071 H17 H 0 0 N N N N N N -44.126 -3.515 26.018 -0.749 -1.007 0.381 H071 XBN 31 XBN H081 H18 H 0 0 N N N N N N -41.757 -4.286 27.215 -1.665 0.151 -2.089 H081 XBN 32 XBN H111 H19 H 0 0 N N N N N N -40.164 -0.758 24.386 -2.453 -2.052 2.063 H111 XBN 33 XBN H1 H20 H 0 1 N N N N N N -38.396 -4.508 24.201 -4.298 2.159 1.132 H1 XBN 34 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal XBN C02 C01 SING N N 1 XBN C03 C02 SING N N 2 XBN C04 C03 SING N N 3 XBN C05 C04 SING N N 4 XBN C06 C05 SING N N 5 XBN N07 C06 SING N N 6 XBN N08 N07 SING N N 7 XBN C09 N08 SING N N 8 XBN O11 C10 SING N N 9 XBN C10 C09 SING N N 10 XBN C12 C09 SING N N 11 XBN O13 C12 DOUB N N 12 XBN O14 C12 SING N N 13 XBN C10 H102 SING N N 14 XBN C10 H101 SING N N 15 XBN C01 H011 SING N N 16 XBN C01 H012 SING N N 17 XBN C01 H013 SING N N 18 XBN C02 H021 SING N N 19 XBN C02 H022 SING N N 20 XBN C03 H032 SING N N 21 XBN C03 H031 SING N N 22 XBN C04 H041 SING N N 23 XBN C04 H042 SING N N 24 XBN C05 H051 SING N N 25 XBN C05 H052 SING N N 26 XBN C06 H062 SING N N 27 XBN C06 H061 SING N N 28 XBN C09 H091 SING N N 29 XBN N07 H071 SING N N 30 XBN N08 H081 SING N N 31 XBN O11 H111 SING N N 32 XBN O14 H1 SING N N 33 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor XBN InChI InChI 1.06 "InChI=1S/C9H20N2O3/c1-2-3-4-5-6-10-11-8(7-12)9(13)14/h8,10-12H,2-7H2,1H3,(H,13,14)/t8-/m0/s1" XBN InChIKey InChI 1.06 HIBZWEWQIZJYRX-QMMMGPOBSA-N XBN SMILES_CANONICAL CACTVS 3.385 "CCCCCCNN[C@@H](CO)C(O)=O" XBN SMILES CACTVS 3.385 "CCCCCCNN[CH](CO)C(O)=O" XBN SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCCCCCNN[C@@H](CO)C(=O)O" XBN SMILES "OpenEye OEToolkits" 2.0.7 "CCCCCCNNC(CO)C(=O)O" # _pdbx_chem_comp_identifier.comp_id XBN _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{S})-2-(2-hexylhydrazinyl)-3-oxidanyl-propanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site XBN "Create component" 2023-10-27 PDBJ XBN "Initial release" 2024-10-30 RCSB #