data_XCB # _chem_comp.id XCB _chem_comp.name "7-[(1~{S})-1-[4-(aminomethyl)phenyl]carbonyloxyethyl]-3-[3-chloranyl-4-(methylsulfonylmethyl)phenyl]-1~{H}-indole-2-carboxylic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C27 H25 Cl N2 O6 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-06-06 _chem_comp.pdbx_modified_date 2024-06-21 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 541.015 _chem_comp.one_letter_code ? _chem_comp.three_letter_code XCB _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8P9S _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal XCB C15 C1 C 0 1 Y N N N N N -22.468 -12.139 12.208 -0.888 -0.795 -0.633 C15 XCB 1 XCB C14 C2 C 0 1 Y N N N N N -22.744 -12.839 13.412 -2.174 -0.378 -0.972 C14 XCB 2 XCB C13 C3 C 0 1 Y N N N N N -26.701 -13.922 15.908 -7.758 -0.565 1.318 C13 XCB 3 XCB C10 C4 C 0 1 N N N N N N -30.359 -15.027 16.394 -10.354 2.151 0.964 C10 XCB 4 XCB C01 C5 C 0 1 N N N N N N -22.354 -12.318 15.889 -3.545 -2.270 -1.803 C01 XCB 5 XCB C02 C6 C 0 1 N N S N N N -23.222 -12.093 14.646 -3.358 -1.260 -0.669 C02 XCB 6 XCB C04 C7 C 0 1 N N N N N N -25.595 -12.211 14.410 -5.515 -0.887 0.284 C04 XCB 7 XCB C06 C8 C 0 1 Y N N N N N -26.819 -12.918 14.942 -6.757 -0.107 0.458 C06 XCB 8 XCB C07 C9 C 0 1 Y N N N N N -28.085 -12.612 14.429 -6.936 1.091 -0.236 C07 XCB 9 XCB C08 C10 C 0 1 Y N N N N N -29.221 -13.256 14.955 -8.099 1.814 -0.069 C08 XCB 10 XCB C09 C11 C 0 1 Y N N N N N -29.110 -14.313 15.891 -9.086 1.355 0.785 C09 XCB 11 XCB C12 C12 C 0 1 Y N N N N N -27.834 -14.592 16.355 -8.915 0.169 1.476 C12 XCB 12 XCB C17 C13 C 0 1 Y N N N N N -22.325 -10.633 10.597 0.971 -1.860 0.078 C17 XCB 13 XCB C18 C14 C 0 1 N N N N N N -22.568 -9.322 9.986 1.833 -2.891 0.664 C18 XCB 14 XCB C21 C15 C 0 1 Y N N N N N -21.874 -11.805 10.031 1.404 -0.660 -0.457 C21 XCB 15 XCB C22 C16 C 0 1 Y N N N N N -21.338 -12.004 8.655 2.801 -0.179 -0.539 C22 XCB 16 XCB C23 C17 C 0 1 Y N N N N N -20.459 -11.040 8.141 3.729 -0.855 -1.334 C23 XCB 17 XCB C24 C18 C 0 1 Y N N N N N -19.938 -11.178 6.893 5.030 -0.402 -1.407 C24 XCB 18 XCB C25 C19 C 0 1 Y N N N N N -20.268 -12.224 6.067 5.417 0.719 -0.695 C25 XCB 19 XCB C26 C20 C 0 1 N N N N N N -19.691 -12.306 4.634 6.841 1.204 -0.775 C26 XCB 20 XCB C28 C21 C 0 1 N N N N N N -20.873 -9.798 3.741 9.468 1.121 0.241 C28 XCB 21 XCB C31 C22 C 0 1 Y N N N N N -21.109 -13.221 6.594 4.502 1.395 0.095 C31 XCB 22 XCB C33 C23 C 0 1 Y N N N N N -21.649 -13.107 7.918 3.195 0.955 0.172 C33 XCB 23 XCB C34 C24 C 0 1 Y N N N N N -21.964 -12.780 11.060 0.204 0.044 -0.925 C34 XCB 24 XCB C35 C25 C 0 1 Y N N N N N -21.691 -14.169 11.094 -0.009 1.277 -1.546 C35 XCB 25 XCB C36 C26 C 0 1 Y N N N N N -21.963 -14.854 12.278 -1.278 1.664 -1.869 C36 XCB 26 XCB C37 C27 C 0 1 Y N N N N N -22.490 -14.201 13.401 -2.360 0.841 -1.584 C37 XCB 27 XCB N11 N1 N 0 1 N N N N N N -30.607 -14.732 17.772 -11.349 1.716 -0.026 N11 XCB 28 XCB N16 N2 N 0 1 Y N N N N N -22.662 -10.831 11.890 -0.402 -1.933 -0.035 N16 XCB 29 XCB O03 O1 O 0 1 N N N N N N -24.492 -12.617 15.041 -4.551 -0.442 -0.547 O03 XCB 30 XCB O05 O2 O 0 1 N N N N N N -25.502 -11.407 13.516 -5.362 -1.929 0.889 O05 XCB 31 XCB O19 O3 O 0 1 N N N N N N -22.451 -8.268 10.678 1.291 -4.026 1.150 O19 XCB 32 XCB O20 O4 O 0 1 N N N N N N -23.016 -9.308 8.772 3.036 -2.722 0.712 O20 XCB 33 XCB O29 O5 O 0 1 N N N N N N -20.180 -11.550 2.088 7.350 0.842 1.787 O29 XCB 34 XCB O30 O6 O 0 1 N N N N N N -22.181 -12.083 3.487 7.888 -0.989 0.248 O30 XCB 35 XCB S27 S1 S 0 1 N N N N N N -20.810 -11.491 3.384 7.826 0.404 0.522 S27 XCB 36 XCB CL1 CL1 CL 0 0 N N N N N N -21.577 -14.596 5.700 4.997 2.801 0.985 CL1 XCB 37 XCB H131 H1 H 0 0 N N N N N N -25.730 -14.177 16.307 -7.627 -1.493 1.855 H131 XCB 38 XCB H102 H2 H 0 0 N N N N N N -31.223 -14.701 15.797 -10.745 1.990 1.968 H102 XCB 39 XCB H101 H3 H 0 0 N N N N N N -30.222 -16.112 16.279 -10.140 3.211 0.822 H101 XCB 40 XCB H013 H4 H 0 0 N N N N N N -22.766 -11.746 16.733 -2.649 -2.883 -1.895 H013 XCB 41 XCB H011 H5 H 0 0 N N N N N N -22.345 -13.389 16.141 -4.402 -2.907 -1.584 H011 XCB 42 XCB H012 H6 H 0 0 N N N N N N -21.327 -11.981 15.685 -3.719 -1.737 -2.738 H012 XCB 43 XCB H021 H7 H 0 0 N N N N N N -23.287 -11.016 14.430 -3.184 -1.792 0.266 H021 XCB 44 XCB H071 H8 H 0 0 N N N N N N -28.190 -11.887 13.635 -6.166 1.451 -0.902 H071 XCB 45 XCB H081 H9 H 0 0 N N N N N N -30.202 -12.936 14.637 -8.239 2.741 -0.605 H081 XCB 46 XCB H121 H10 H 0 0 N N N N N N -27.714 -15.366 17.099 -9.692 -0.186 2.138 H121 XCB 47 XCB H231 H11 H 0 0 N N N N N N -20.194 -10.182 8.741 3.428 -1.730 -1.890 H231 XCB 48 XCB H241 H12 H 0 0 N N N N N N -19.238 -10.437 6.538 5.748 -0.925 -2.021 H241 XCB 49 XCB H261 H13 H 0 0 N N N N N N -19.565 -13.364 4.362 7.256 0.955 -1.752 H261 XCB 50 XCB H262 H14 H 0 0 N N N N N N -18.712 -11.804 4.616 6.866 2.285 -0.635 H262 XCB 51 XCB H281 H15 H 0 0 N N N N N N -21.344 -9.647 4.724 10.171 0.716 0.969 H281 XCB 52 XCB H282 H16 H 0 0 N N N N N N -19.852 -9.389 3.757 9.806 0.875 -0.765 H282 XCB 53 XCB H283 H17 H 0 0 N N N N N N -21.463 -9.282 2.969 9.415 2.204 0.352 H283 XCB 54 XCB H331 H18 H 0 0 N N N N N N -22.288 -13.878 8.322 2.482 1.482 0.789 H331 XCB 55 XCB H351 H19 H 0 0 N N N N N N -21.286 -14.680 10.233 0.827 1.922 -1.770 H351 XCB 56 XCB H361 H20 H 0 0 N N N N N N -21.763 -15.914 12.331 -1.442 2.618 -2.349 H361 XCB 57 XCB H371 H21 H 0 0 N N N N N N -22.705 -14.779 14.287 -3.358 1.161 -1.845 H371 XCB 58 XCB H112 H22 H 0 0 N N N N N N -31.430 -15.213 18.073 -12.208 2.235 0.073 H112 XCB 59 XCB H111 H24 H 0 0 N N N N N N -29.827 -15.030 18.322 -10.984 1.795 -0.964 H111 XCB 60 XCB H161 H25 H 0 0 N N N N N N -23.001 -10.127 12.515 -0.945 -2.678 0.266 H161 XCB 61 XCB H2 H26 H 0 1 N N N N N N -22.736 -7.520 10.167 1.938 -4.645 1.516 H2 XCB 62 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal XCB O29 S27 DOUB N N 1 XCB S27 O30 DOUB N N 2 XCB S27 C28 SING N N 3 XCB S27 C26 SING N N 4 XCB C26 C25 SING N N 5 XCB CL1 C31 SING N N 6 XCB C25 C31 DOUB Y N 7 XCB C25 C24 SING Y N 8 XCB C31 C33 SING Y N 9 XCB C24 C23 DOUB Y N 10 XCB C33 C22 DOUB Y N 11 XCB C23 C22 SING Y N 12 XCB C22 C21 SING N N 13 XCB O20 C18 DOUB N N 14 XCB C18 C17 SING N N 15 XCB C18 O19 SING N N 16 XCB C21 C17 DOUB Y N 17 XCB C21 C34 SING Y N 18 XCB C17 N16 SING Y N 19 XCB C34 C35 DOUB Y N 20 XCB C34 C15 SING Y N 21 XCB C35 C36 SING Y N 22 XCB N16 C15 SING Y N 23 XCB C15 C14 DOUB Y N 24 XCB C36 C37 DOUB Y N 25 XCB C37 C14 SING Y N 26 XCB C14 C02 SING N N 27 XCB O05 C04 DOUB N N 28 XCB C04 C06 SING N N 29 XCB C04 O03 SING N N 30 XCB C07 C06 DOUB Y N 31 XCB C07 C08 SING Y N 32 XCB C02 O03 SING N N 33 XCB C02 C01 SING N N 34 XCB C06 C13 SING Y N 35 XCB C08 C09 DOUB Y N 36 XCB C09 C12 SING Y N 37 XCB C09 C10 SING N N 38 XCB C13 C12 DOUB Y N 39 XCB C10 N11 SING N N 40 XCB C13 H131 SING N N 41 XCB C10 H102 SING N N 42 XCB C10 H101 SING N N 43 XCB C01 H013 SING N N 44 XCB C01 H011 SING N N 45 XCB C01 H012 SING N N 46 XCB C02 H021 SING N N 47 XCB C07 H071 SING N N 48 XCB C08 H081 SING N N 49 XCB C12 H121 SING N N 50 XCB C23 H231 SING N N 51 XCB C24 H241 SING N N 52 XCB C26 H261 SING N N 53 XCB C26 H262 SING N N 54 XCB C28 H281 SING N N 55 XCB C28 H282 SING N N 56 XCB C28 H283 SING N N 57 XCB C33 H331 SING N N 58 XCB C35 H351 SING N N 59 XCB C36 H361 SING N N 60 XCB C37 H371 SING N N 61 XCB N11 H112 SING N N 62 XCB N11 H111 SING N N 63 XCB N16 H161 SING N N 64 XCB O19 H2 SING N N 65 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor XCB InChI InChI 1.06 "InChI=1S/C27H25ClN2O6S/c1-15(36-27(33)17-8-6-16(13-29)7-9-17)20-4-3-5-21-23(25(26(31)32)30-24(20)21)18-10-11-19(22(28)12-18)14-37(2,34)35/h3-12,15,30H,13-14,29H2,1-2H3,(H,31,32)/t15-/m0/s1" XCB InChIKey InChI 1.06 XWLZXMNTBNSDQV-HNNXBMFYSA-N XCB SMILES_CANONICAL CACTVS 3.385 "C[C@H](OC(=O)c1ccc(CN)cc1)c2cccc3c2[nH]c(C(O)=O)c3c4ccc(C[S](C)(=O)=O)c(Cl)c4" XCB SMILES CACTVS 3.385 "C[CH](OC(=O)c1ccc(CN)cc1)c2cccc3c2[nH]c(C(O)=O)c3c4ccc(C[S](C)(=O)=O)c(Cl)c4" XCB SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@@H](c1cccc2c1[nH]c(c2c3ccc(c(c3)Cl)CS(=O)(=O)C)C(=O)O)OC(=O)c4ccc(cc4)CN" XCB SMILES "OpenEye OEToolkits" 2.0.7 "CC(c1cccc2c1[nH]c(c2c3ccc(c(c3)Cl)CS(=O)(=O)C)C(=O)O)OC(=O)c4ccc(cc4)CN" # _pdbx_chem_comp_identifier.comp_id XCB _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "7-[(1~{S})-1-[4-(aminomethyl)phenyl]carbonyloxyethyl]-3-[3-chloranyl-4-(methylsulfonylmethyl)phenyl]-1~{H}-indole-2-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site XCB "Create component" 2023-06-06 PDBE XCB "Initial release" 2024-06-26 RCSB #