data_XDV # _chem_comp.id XDV _chem_comp.name "2-[2-(2-aminoethoxy)ethoxy]acetamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C6 H14 N2 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-12-11 _chem_comp.pdbx_modified_date 2023-11-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 162.187 _chem_comp.one_letter_code ? _chem_comp.three_letter_code XDV _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7KZL _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal XDV N10 N1 N 0 1 N N N N N N -37.173 -3.864 15.925 4.411 0.743 -0.434 N10 XDV 1 XDV C02 C1 C 0 1 N N N N N N -39.122 -8.351 8.625 -3.678 1.169 0.322 C02 XDV 2 XDV C03 C2 C 0 1 N N N N N N -38.870 -7.528 9.891 -3.064 -0.170 0.733 C03 XDV 3 XDV C05 C3 C 0 1 N N N N N N -39.297 -5.320 10.615 -1.145 -1.566 0.392 C05 XDV 4 XDV C06 C4 C 0 1 N N N N N N -37.965 -4.820 11.174 0.183 -1.640 -0.364 C06 XDV 5 XDV C08 C5 C 0 1 N N N N N N -37.867 -4.180 13.460 2.330 -0.589 -0.541 C08 XDV 6 XDV C09 C6 C 0 1 N N N N N N -37.158 -4.680 14.723 3.162 0.531 0.026 C09 XDV 7 XDV N01 N2 N 0 1 N N N Y Y N -38.094 -8.042 7.647 -3.990 1.145 -1.114 N01 XDV 8 XDV O04 O1 O 0 1 N N N N N N -39.014 -6.178 9.547 -1.807 -0.340 0.075 O04 XDV 9 XDV O07 O2 O 0 1 N N N N N N -37.873 -5.219 12.518 1.055 -0.609 0.104 O07 XDV 10 XDV O11 O3 O 0 1 N N N N N N -36.592 -5.730 14.721 2.709 1.243 0.897 O11 XDV 11 XDV H101 H1 H 0 0 N N N N N N -36.709 -4.183 16.751 4.774 0.174 -1.131 H101 XDV 12 XDV H102 H2 H 0 0 N N N N N N -37.648 -2.984 15.926 4.946 1.467 -0.071 H102 XDV 13 XDV H021 H3 H 0 0 N N N N N N -40.110 -8.100 8.213 -4.593 1.339 0.890 H021 XDV 14 XDV H022 H4 H 0 0 N N N N N N -39.088 -9.423 8.869 -2.969 1.972 0.526 H022 XDV 15 XDV H032 H5 H 0 0 N N N N N N -39.601 -7.798 10.667 -2.914 -0.186 1.812 H032 XDV 16 XDV H031 H6 H 0 0 N N N N N N -37.852 -7.715 10.265 -3.735 -0.980 0.447 H031 XDV 17 XDV H052 H7 H 0 0 N N N N N N -39.899 -4.469 10.263 -1.777 -2.405 0.100 H052 XDV 18 XDV H051 H8 H 0 0 N N N N N N -39.851 -5.863 11.395 -0.956 -1.610 1.464 H051 XDV 19 XDV H062 H9 H 0 0 N N N N N N -37.134 -5.255 10.599 0.645 -2.612 -0.193 H062 XDV 20 XDV H061 H10 H 0 0 N N N N N N -37.922 -3.723 11.108 0.002 -1.507 -1.431 H061 XDV 21 XDV H082 H11 H 0 0 N N N N N N -37.331 -3.311 13.052 2.193 -0.434 -1.612 H082 XDV 22 XDV H081 H12 H 0 0 N N N N N N -38.901 -3.892 13.703 2.836 -1.539 -0.374 H081 XDV 23 XDV H1 H13 H 0 1 N N N Y Y N -38.252 -8.576 6.817 -4.595 0.370 -1.339 H1 XDV 24 XDV H2 H14 H 0 1 N Y N Y Y N -38.126 -7.067 7.427 -4.397 2.020 -1.410 H2 XDV 25 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal XDV N01 C02 SING N N 1 XDV C02 C03 SING N N 2 XDV O04 C03 SING N N 3 XDV O04 C05 SING N N 4 XDV C05 C06 SING N N 5 XDV C06 O07 SING N N 6 XDV O07 C08 SING N N 7 XDV C08 C09 SING N N 8 XDV O11 C09 DOUB N N 9 XDV C09 N10 SING N N 10 XDV N10 H101 SING N N 11 XDV N10 H102 SING N N 12 XDV C02 H021 SING N N 13 XDV C02 H022 SING N N 14 XDV C03 H032 SING N N 15 XDV C03 H031 SING N N 16 XDV C05 H052 SING N N 17 XDV C05 H051 SING N N 18 XDV C06 H062 SING N N 19 XDV C06 H061 SING N N 20 XDV C08 H082 SING N N 21 XDV C08 H081 SING N N 22 XDV N01 H1 SING N N 23 XDV N01 H2 SING N N 24 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor XDV SMILES ACDLabs 12.01 "NC(COCCOCCN)=O" XDV InChI InChI 1.03 "InChI=1S/C6H14N2O3/c7-1-2-10-3-4-11-5-6(8)9/h1-5,7H2,(H2,8,9)" XDV InChIKey InChI 1.03 CDFONQZJZPNQML-UHFFFAOYSA-N XDV SMILES_CANONICAL CACTVS 3.385 "NCCOCCOCC(N)=O" XDV SMILES CACTVS 3.385 "NCCOCCOCC(N)=O" XDV SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C(COCCOCC(=O)N)N" XDV SMILES "OpenEye OEToolkits" 2.0.7 "C(COCCOCC(=O)N)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier XDV "SYSTEMATIC NAME" ACDLabs 12.01 "2-[2-(2-aminoethoxy)ethoxy]acetamide" XDV "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "2-[2-(2-azanylethoxy)ethoxy]ethanamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site XDV "Create component" 2020-12-11 RCSB XDV "Initial release" 2020-12-23 RCSB XDV "Modify backbone" 2023-11-03 PDBE #