data_XDZ # _chem_comp.id XDZ _chem_comp.name "2-[5-bromanyl-3-[2,2,2-tris(fluoranyl)ethanoyl]indol-1-yl]-N-cycloheptyl-ethanamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C19 H20 Br F3 N2 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms Epoxykinin _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-10-30 _chem_comp.pdbx_modified_date 2024-02-23 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 445.274 _chem_comp.one_letter_code ? _chem_comp.three_letter_code XDZ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8QZD _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal XDZ N1 N1 N 0 1 Y N N N N N -11.097 17.384 -23.049 -0.042 0.749 -1.189 N1 XDZ 1 XDZ C4 C1 C 0 1 Y N N N N N -9.790 17.691 -22.848 0.585 1.868 -0.777 C4 XDZ 2 XDZ C5 C2 C 0 1 N N N N N N -11.662 16.068 -22.892 -1.363 0.720 -1.822 C5 XDZ 3 XDZ C6 C3 C 0 1 N N N N N N -11.973 15.381 -24.209 -2.416 0.457 -0.776 C6 XDZ 4 XDZ C7 C4 C 0 1 N N N N N N -13.626 13.835 -25.322 -4.738 0.132 -0.113 C7 XDZ 5 XDZ C8 C5 C 0 1 N N N N N N -14.421 14.720 -26.274 -4.808 -1.385 0.155 C8 XDZ 6 XDZ C10 C6 C 0 1 N N N N N N -15.500 12.821 -27.738 -6.964 -1.841 1.401 C10 XDZ 7 XDZ C13 C7 C 0 1 N N N N N N -14.418 12.696 -24.610 -6.007 0.673 -0.576 C13 XDZ 8 XDZ C15 C8 C 0 1 Y N N N N N -13.164 18.720 -23.539 0.544 -1.725 -1.168 C15 XDZ 9 XDZ C17 C9 C 0 1 Y N N N N N -12.732 21.061 -23.677 2.685 -2.195 -0.186 C17 XDZ 10 XDZ O1 O1 O 0 1 N N N N N N -8.319 20.980 -22.702 3.845 2.015 0.676 O1 XDZ 11 XDZ C1 C10 C 0 1 N N N N N N -8.375 19.761 -22.843 2.762 2.431 0.318 C1 XDZ 12 XDZ C2 C11 C 0 1 N N N N N N -7.107 18.950 -22.737 2.434 3.895 0.454 C2 XDZ 13 XDZ F1 F1 F 0 1 N N N N N N -6.029 19.717 -22.897 2.391 4.240 1.809 F1 XDZ 14 XDZ F2 F2 F 0 1 N N N N N N -7.050 18.364 -21.549 3.418 4.655 -0.189 F2 XDZ 15 XDZ F3 F3 F 0 1 N N N N N N -7.057 17.973 -23.631 1.190 4.151 -0.132 F3 XDZ 16 XDZ C3 C12 C 0 1 Y N N N N N -9.615 19.058 -22.991 1.806 1.538 -0.229 C3 XDZ 17 XDZ N2 N2 N 0 1 N N N N N N -13.090 14.710 -24.277 -3.714 0.387 -1.130 N2 XDZ 18 XDZ C9 C13 C 0 1 N N N N N N -14.680 14.101 -27.640 -5.445 -1.604 1.500 C9 XDZ 19 XDZ C11 C14 C 0 1 N N N N N N -16.093 12.216 -26.475 -7.650 -0.904 0.389 C11 XDZ 20 XDZ C12 C15 C 0 1 N N N N N N -15.078 11.669 -25.493 -7.132 0.506 0.466 C12 XDZ 21 XDZ O2 O2 O 0 1 N N N N N N -11.155 15.380 -25.124 -2.094 0.309 0.384 O2 XDZ 22 XDZ C14 C16 C 0 1 Y N N N N N -11.816 18.548 -23.276 0.733 -0.365 -0.939 C14 XDZ 23 XDZ C16 C17 C 0 1 Y N N N N N -13.618 20.002 -23.726 1.514 -2.627 -0.793 C16 XDZ 24 XDZ BR1 BR1 BR 0 0 N N N N N N -13.448 22.798 -23.925 4.003 -3.453 0.320 BR1 XDZ 25 XDZ C18 C18 C 0 1 Y N N N N N -11.380 20.916 -23.478 2.891 -0.852 0.050 C18 XDZ 26 XDZ C19 C19 C 0 1 Y N N N N N -10.919 19.621 -23.265 1.918 0.070 -0.325 C19 XDZ 27 XDZ H1 H1 H 0 1 N N N N N N -9.010 16.982 -22.614 0.191 2.869 -0.863 H1 XDZ 28 XDZ H2 H2 H 0 1 N N N N N N -12.595 16.156 -22.317 -1.558 1.680 -2.301 H2 XDZ 29 XDZ H3 H3 H 0 1 N N N N N N -10.946 15.446 -22.336 -1.390 -0.072 -2.571 H3 XDZ 30 XDZ H4 H4 H 0 1 N N N N N N -12.794 13.379 -25.879 -4.453 0.639 0.808 H4 XDZ 31 XDZ H5 H5 H 0 1 N N N N N N -13.862 15.656 -26.421 -5.408 -1.866 -0.618 H5 XDZ 32 XDZ H6 H6 H 0 1 N N N N N N -15.392 14.942 -25.807 -3.802 -1.805 0.150 H6 XDZ 33 XDZ H7 H7 H 0 1 N N N N N N -16.339 13.029 -28.418 -7.140 -2.874 1.100 H7 XDZ 34 XDZ H8 H8 H 0 1 N N N N N N -15.205 13.168 -24.003 -5.881 1.734 -0.793 H8 XDZ 35 XDZ H9 H9 H 0 1 N N N N N N -13.716 12.165 -23.951 -6.297 0.158 -1.492 H9 XDZ 36 XDZ H10 H10 H 0 1 N N N N N N -13.835 17.876 -23.595 -0.364 -2.072 -1.640 H10 XDZ 37 XDZ H11 H11 H 0 1 N N N N N N -13.682 14.811 -23.478 -3.971 0.506 -2.058 H11 XDZ 38 XDZ H12 H12 H 0 1 N N N N N N -13.698 13.887 -28.086 -4.983 -2.471 1.972 H12 XDZ 39 XDZ H13 H13 H 0 1 N N N N N N -16.677 12.996 -25.964 -7.481 -1.287 -0.618 H13 XDZ 40 XDZ H14 H14 H 0 1 N N N N N N -16.760 11.393 -26.771 -8.723 -0.897 0.585 H14 XDZ 41 XDZ H15 H15 H 0 1 N N N N N N -15.590 10.942 -24.845 -6.737 0.697 1.464 H15 XDZ 42 XDZ H16 H16 H 0 1 N N N N N N -14.291 11.158 -26.067 -7.939 1.206 0.249 H16 XDZ 43 XDZ H17 H17 H 0 1 N N N N N N -14.667 20.183 -23.911 1.363 -3.681 -0.973 H17 XDZ 44 XDZ H18 H18 H 0 1 N N N N N N -10.710 21.763 -23.487 3.802 -0.518 0.523 H18 XDZ 45 XDZ H19 H19 H 0 1 N N N N N N -14.848 12.056 -28.184 -7.410 -1.683 2.384 H19 XDZ 46 XDZ H20 H20 H 0 1 N N N N N N -15.199 14.861 -28.243 -5.265 -0.728 2.122 H20 XDZ 47 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal XDZ C10 C9 SING N N 1 XDZ C10 C11 SING N N 2 XDZ C9 C8 SING N N 3 XDZ C11 C12 SING N N 4 XDZ C8 C7 SING N N 5 XDZ C12 C13 SING N N 6 XDZ C7 C13 SING N N 7 XDZ C7 N2 SING N N 8 XDZ O2 C6 DOUB N N 9 XDZ N2 C6 SING N N 10 XDZ C6 C5 SING N N 11 XDZ BR1 C17 SING N N 12 XDZ C16 C17 SING Y N 13 XDZ C16 C15 DOUB Y N 14 XDZ C17 C18 DOUB Y N 15 XDZ F3 C2 SING N N 16 XDZ C15 C14 SING Y N 17 XDZ C18 C19 SING Y N 18 XDZ C14 C19 DOUB Y N 19 XDZ C14 N1 SING Y N 20 XDZ C19 C3 SING Y N 21 XDZ N1 C5 SING N N 22 XDZ N1 C4 SING Y N 23 XDZ C3 C4 DOUB Y N 24 XDZ C3 C1 SING N N 25 XDZ F1 C2 SING N N 26 XDZ C1 C2 SING N N 27 XDZ C1 O1 DOUB N N 28 XDZ C2 F2 SING N N 29 XDZ C4 H1 SING N N 30 XDZ C5 H2 SING N N 31 XDZ C5 H3 SING N N 32 XDZ C7 H4 SING N N 33 XDZ C8 H5 SING N N 34 XDZ C8 H6 SING N N 35 XDZ C10 H7 SING N N 36 XDZ C13 H8 SING N N 37 XDZ C13 H9 SING N N 38 XDZ C15 H10 SING N N 39 XDZ N2 H11 SING N N 40 XDZ C9 H12 SING N N 41 XDZ C11 H13 SING N N 42 XDZ C11 H14 SING N N 43 XDZ C12 H15 SING N N 44 XDZ C12 H16 SING N N 45 XDZ C16 H17 SING N N 46 XDZ C18 H18 SING N N 47 XDZ C10 H19 SING N N 48 XDZ C9 H20 SING N N 49 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor XDZ InChI InChI 1.06 "InChI=1S/C19H20BrF3N2O2/c20-12-7-8-16-14(9-12)15(18(27)19(21,22)23)10-25(16)11-17(26)24-13-5-3-1-2-4-6-13/h7-10,13H,1-6,11H2,(H,24,26)" XDZ InChIKey InChI 1.06 LJWGWJLCHFYATI-UHFFFAOYSA-N XDZ SMILES_CANONICAL CACTVS 3.385 "FC(F)(F)C(=O)c1cn(CC(=O)NC2CCCCCC2)c3ccc(Br)cc13" XDZ SMILES CACTVS 3.385 "FC(F)(F)C(=O)c1cn(CC(=O)NC2CCCCCC2)c3ccc(Br)cc13" XDZ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc2c(cc1Br)c(cn2CC(=O)NC3CCCCCC3)C(=O)C(F)(F)F" XDZ SMILES "OpenEye OEToolkits" 2.0.7 "c1cc2c(cc1Br)c(cn2CC(=O)NC3CCCCCC3)C(=O)C(F)(F)F" # _pdbx_chem_comp_identifier.comp_id XDZ _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "2-[5-bromanyl-3-[2,2,2-tris(fluoranyl)ethanoyl]indol-1-yl]-~{N}-cycloheptyl-ethanamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site XDZ "Create component" 2023-10-30 PDBE XDZ "Initial release" 2024-02-28 RCSB # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id XDZ _pdbx_chem_comp_synonyms.name Epoxykinin _pdbx_chem_comp_synonyms.provenance AUTHOR _pdbx_chem_comp_synonyms.type ? #