data_XE0 # _chem_comp.id XE0 _chem_comp.name "4-[2-(2,4-dichlorophenyl)ethyl]-6-(trifluoromethyl)pyrimidin-2-ol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C13 H9 Cl2 F3 N2 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-11-14 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 337.125 _chem_comp.one_letter_code ? _chem_comp.three_letter_code XE0 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8F4Y _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal XE0 C1 C1 C 0 1 Y N N N N N 98.357 9.251 20.425 3.037 -2.119 -0.315 C1 XE0 1 XE0 C2 C2 C 0 1 Y N N N N N 96.763 10.517 21.594 1.355 -0.690 0.335 C2 XE0 2 XE0 C3 C3 C 0 1 N N N N N N 96.196 11.332 22.731 -0.101 -0.436 0.630 C3 XE0 3 XE0 C5 C4 C 0 1 Y N N N N N 95.566 11.850 24.922 -2.399 -0.575 -0.291 C5 XE0 4 XE0 C6 C5 C 0 1 Y N N N N N 96.318 12.909 25.422 -3.196 -1.598 0.185 C6 XE0 5 XE0 C7 C6 C 0 1 Y N N N N N 95.702 13.918 26.147 -4.530 -1.365 0.460 C7 XE0 6 XE0 C8 C7 C 0 1 Y N N N N N 94.331 13.895 26.369 -5.069 -0.106 0.260 C8 XE0 7 XE0 C9 C8 C 0 1 Y N N N N N 93.585 12.844 25.856 -4.271 0.919 -0.217 C9 XE0 8 XE0 C10 C9 C 0 1 Y N N N N N 94.196 11.831 25.134 -2.936 0.685 -0.492 C10 XE0 9 XE0 C11 C10 C 0 1 Y N N N N N 95.918 10.426 20.517 2.286 0.327 0.469 C11 XE0 10 XE0 F3 F1 F 0 1 N N N N N N 95.437 8.451 17.730 5.181 1.114 1.620 F3 XE0 11 XE0 C13 C11 C 0 1 N N N N N N 95.364 9.657 18.259 4.663 1.125 0.321 C13 XE0 12 XE0 F1 F2 F 0 1 N N N N N N 94.140 9.916 18.689 4.086 2.373 0.060 F1 XE0 13 XE0 F2 F3 F 0 1 N N N N N N 95.709 10.569 17.369 5.694 0.887 -0.595 F2 XE0 14 XE0 C12 C12 C 0 1 Y N N N N N 96.309 9.734 19.405 3.615 0.050 0.188 C12 XE0 15 XE0 N2 N1 N 0 1 Y N N N N N 97.521 9.157 19.373 3.952 -1.169 -0.197 N2 XE0 16 XE0 O O1 O 0 1 N N N N N N 99.572 8.643 20.310 3.418 -3.358 -0.706 O XE0 17 XE0 N1 N2 N 0 1 Y N N N N N 97.992 9.939 21.547 1.761 -1.888 -0.055 N1 XE0 18 XE0 C4 C13 C 0 1 N N N N N N 96.264 10.758 24.134 -0.943 -0.829 -0.586 C4 XE0 19 XE0 CL2 CL1 CL 0 0 N N N N N N 93.142 10.523 24.510 -1.934 1.970 -1.089 CL2 XE0 20 XE0 CL1 CL2 CL 0 0 N N N N N N 93.501 15.205 27.298 -6.745 0.186 0.604 CL1 XE0 21 XE0 H1 H1 H 0 1 N N N N N N 96.736 12.290 22.745 -0.406 -1.031 1.491 H1 XE0 22 XE0 H2 H2 H 0 1 N N N N N N 95.135 11.512 22.504 -0.248 0.621 0.848 H2 XE0 23 XE0 H3 H3 H 0 1 N N N N N N 97.383 12.945 25.245 -2.777 -2.581 0.341 H3 XE0 24 XE0 H4 H4 H 0 1 N N N N N N 96.294 14.730 26.543 -5.153 -2.165 0.832 H4 XE0 25 XE0 H5 H5 H 0 1 N N N N N N 92.518 12.815 26.021 -4.690 1.902 -0.373 H5 XE0 26 XE0 H6 H6 H 0 1 N N N N N N 94.948 10.899 20.548 1.983 1.314 0.786 H6 XE0 27 XE0 H8 H8 H 0 1 N N N N N N 95.727 9.801 24.206 -0.637 -0.234 -1.447 H8 XE0 28 XE0 H9 H9 H 0 1 N N N N N N 97.304 10.621 24.465 -0.795 -1.887 -0.804 H9 XE0 29 XE0 H7 H7 H 0 1 N N N N N N 99.639 8.227 19.459 3.398 -3.492 -1.663 H7 XE0 30 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal XE0 F2 C13 SING N N 1 XE0 F3 C13 SING N N 2 XE0 C13 F1 SING N N 3 XE0 C13 C12 SING N N 4 XE0 N2 C12 DOUB Y N 5 XE0 N2 C1 SING Y N 6 XE0 C12 C11 SING Y N 7 XE0 O C1 SING N N 8 XE0 C1 N1 DOUB Y N 9 XE0 C11 C2 DOUB Y N 10 XE0 N1 C2 SING Y N 11 XE0 C2 C3 SING N N 12 XE0 C3 C4 SING N N 13 XE0 C4 C5 SING N N 14 XE0 CL2 C10 SING N N 15 XE0 C5 C10 SING Y N 16 XE0 C5 C6 DOUB Y N 17 XE0 C10 C9 DOUB Y N 18 XE0 C6 C7 SING Y N 19 XE0 C9 C8 SING Y N 20 XE0 C7 C8 DOUB Y N 21 XE0 C8 CL1 SING N N 22 XE0 C3 H1 SING N N 23 XE0 C3 H2 SING N N 24 XE0 C6 H3 SING N N 25 XE0 C7 H4 SING N N 26 XE0 C9 H5 SING N N 27 XE0 C11 H6 SING N N 28 XE0 C4 H8 SING N N 29 XE0 C4 H9 SING N N 30 XE0 O H7 SING N N 31 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor XE0 SMILES ACDLabs 12.01 "Oc1nc(CCc2ccc(Cl)cc2Cl)cc(n1)C(F)(F)F" XE0 InChI InChI 1.06 "InChI=1S/C13H9Cl2F3N2O/c14-8-3-1-7(10(15)5-8)2-4-9-6-11(13(16,17)18)20-12(21)19-9/h1,3,5-6H,2,4H2,(H,19,20,21)" XE0 InChIKey InChI 1.06 IBPXEUWFSZDIPG-UHFFFAOYSA-N XE0 SMILES_CANONICAL CACTVS 3.385 "Oc1nc(CCc2ccc(Cl)cc2Cl)cc(n1)C(F)(F)F" XE0 SMILES CACTVS 3.385 "Oc1nc(CCc2ccc(Cl)cc2Cl)cc(n1)C(F)(F)F" XE0 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(c(cc1Cl)Cl)CCc2cc(nc(n2)O)C(F)(F)F" XE0 SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(c(cc1Cl)Cl)CCc2cc(nc(n2)O)C(F)(F)F" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier XE0 "SYSTEMATIC NAME" ACDLabs 12.01 "4-[2-(2,4-dichlorophenyl)ethyl]-6-(trifluoromethyl)pyrimidin-2-ol" XE0 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "4-[2-(2,4-dichlorophenyl)ethyl]-6-(trifluoromethyl)pyrimidin-2-ol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site XE0 "Create component" 2022-11-14 RCSB XE0 "Initial release" 2023-10-18 RCSB XE0 "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id XE0 _pdbx_chem_comp_pcm.modified_residue_id CYS _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C4 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom SG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #