data_XE9 # _chem_comp.id XE9 _chem_comp.name "[3-(3-chloranyl-2-piperazin-1-yl-quinolin-6-yl)phenyl]methanamine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C20 H21 Cl N4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-10-31 _chem_comp.pdbx_modified_date 2024-11-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 352.861 _chem_comp.one_letter_code ? _chem_comp.three_letter_code XE9 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8QZT _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal XE9 N1 N1 N 0 1 N N N N N N 136.073 158.479 183.338 -7.315 -1.990 1.023 N1 XE9 1 XE9 N3 N2 N 0 1 N N N N N N 135.175 162.900 173.082 4.059 -0.243 0.006 N3 XE9 2 XE9 C4 C1 C 0 1 Y N N N N N 135.115 161.921 180.806 -3.669 0.331 -0.121 C4 XE9 3 XE9 C5 C2 C 0 1 Y N N N N N 135.863 160.991 181.528 -4.597 -0.705 -0.211 C5 XE9 4 XE9 C6 C3 C 0 1 Y N N N N N 135.739 160.862 182.903 -5.947 -0.419 -0.229 C6 XE9 5 XE9 C7 C4 C 0 1 N N N N N N 136.566 159.845 183.632 -6.951 -1.538 -0.327 C7 XE9 6 XE9 C8 C5 C 0 1 Y N N N N N 135.282 162.053 179.336 -2.217 0.031 -0.108 C8 XE9 7 XE9 C10 C6 C 0 1 Y N N N N N 134.429 162.616 177.143 0.069 0.773 -0.018 C10 XE9 8 XE9 C13 C7 C 0 1 Y N N N N N 136.521 161.745 178.716 -1.780 -1.301 -0.181 C13 XE9 9 XE9 C15 C8 C 0 1 Y N N N N N 133.575 163.162 174.989 2.350 1.452 0.069 C15 XE9 10 XE9 C17 C9 C 0 1 N N N N N N 136.607 162.807 172.752 4.398 -1.017 1.208 C17 XE9 11 XE9 C20 C10 C 0 1 N N N N N N 134.168 162.919 172.022 4.422 -0.980 -1.212 C20 XE9 12 XE9 C1 C11 C 0 1 Y N N N N N 134.844 161.672 183.577 -6.380 0.893 -0.156 C1 XE9 13 XE9 C11 C12 C 0 1 Y N N N N N 135.662 162.303 176.551 0.501 -0.575 -0.086 C11 XE9 14 XE9 C12 C13 C 0 1 Y N N N N N 136.703 161.847 177.373 -0.455 -1.602 -0.171 C12 XE9 15 XE9 C14 C14 C 0 1 Y N N N N N 133.383 163.049 176.328 1.033 1.801 0.062 C14 XE9 16 XE9 C16 C15 C 0 1 Y N N N N N 134.856 162.859 174.416 2.714 0.098 -0.002 C16 XE9 17 XE9 C18 C16 C 0 1 N N N N N N 137.013 163.230 171.352 5.902 -1.305 1.218 C18 XE9 18 XE9 C19 C17 C 0 1 N N N N N N 134.780 162.679 170.673 5.925 -1.267 -1.202 C19 XE9 19 XE9 C2 C18 C 0 1 Y N N N N N 134.093 162.599 182.887 -5.464 1.925 -0.066 C2 XE9 20 XE9 C3 C19 C 0 1 Y N N N N N 134.229 162.727 181.517 -4.111 1.651 -0.048 C3 XE9 21 XE9 C9 C20 C 0 1 Y N N N N N 134.263 162.487 178.533 -1.302 1.065 -0.029 C9 XE9 22 XE9 N2 N3 N 0 1 Y N N N N N 135.855 162.414 175.201 1.809 -0.856 -0.075 N2 XE9 23 XE9 N4 N4 N 0 1 N N N N N N 135.874 163.654 170.511 6.265 -2.042 -0.000 N4 XE9 24 XE9 CL1 CL1 CL 0 0 N N N N N N 132.236 163.709 174.052 3.575 2.678 0.166 CL1 XE9 25 XE9 H7 H1 H 0 1 N N N N N N 136.631 157.810 183.829 -7.661 -1.223 1.580 H7 XE9 26 XE9 H8 H2 H 0 1 N N N N N N 135.121 158.398 183.632 -7.988 -2.741 0.984 H8 XE9 27 XE9 H4 H4 H 0 1 N N N N N N 136.558 160.354 181.001 -4.260 -1.730 -0.267 H4 XE9 28 XE9 H5 H5 H 0 1 N N N N N N 137.614 159.930 183.310 -6.517 -2.369 -0.883 H5 XE9 29 XE9 H6 H6 H 0 1 N N N N N N 136.499 160.030 184.714 -7.843 -1.182 -0.844 H6 XE9 30 XE9 H12 H7 H 0 1 N N N N N N 137.346 161.419 179.332 -2.506 -2.097 -0.246 H12 XE9 31 XE9 H14 H8 H 0 1 N N N N N N 136.912 161.759 172.885 4.131 -0.445 2.096 H14 XE9 32 XE9 H15 H9 H 0 1 N N N N N N 137.155 163.442 173.464 3.848 -1.958 1.202 H15 XE9 33 XE9 H23 H10 H 0 1 N N N N N N 133.672 163.901 172.019 3.872 -1.921 -1.246 H23 XE9 34 XE9 H22 H11 H 0 1 N N N N N N 133.425 162.133 172.222 4.172 -0.381 -2.088 H22 XE9 35 XE9 H1 H12 H 0 1 N N N N N N 134.733 161.578 184.647 -7.437 1.112 -0.171 H1 XE9 36 XE9 H11 H13 H 0 1 N N N N N N 137.653 161.576 176.937 -0.136 -2.633 -0.227 H11 XE9 37 XE9 H13 H14 H 0 1 N N N N N N 132.424 163.293 176.761 0.734 2.837 0.115 H13 XE9 38 XE9 H17 H15 H 0 1 N N N N N N 137.510 162.380 170.862 6.452 -0.364 1.252 H17 XE9 39 XE9 H16 H16 H 0 1 N N N N N N 137.718 164.070 171.433 6.151 -1.904 2.094 H16 XE9 40 XE9 H20 H17 H 0 1 N N N N N N 134.026 162.825 169.886 6.193 -1.839 -2.091 H20 XE9 41 XE9 H21 H18 H 0 1 N N N N N N 135.177 161.655 170.616 6.476 -0.326 -1.196 H21 XE9 42 XE9 H2 H19 H 0 1 N N N N N N 133.395 163.228 183.419 -5.807 2.947 -0.010 H2 XE9 43 XE9 H3 H20 H 0 1 N N N N N N 133.639 163.463 180.990 -3.397 2.457 0.022 H3 XE9 44 XE9 H10 H21 H 0 1 N N N N N N 133.310 162.736 178.977 -1.641 2.089 0.023 H10 XE9 45 XE9 H19 H22 H 0 1 N N N N N N 136.157 163.686 169.552 5.825 -2.950 -0.018 H19 XE9 46 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal XE9 N4 C19 SING N N 1 XE9 N4 C18 SING N N 2 XE9 C19 C20 SING N N 3 XE9 C18 C17 SING N N 4 XE9 C20 N3 SING N N 5 XE9 C17 N3 SING N N 6 XE9 N3 C16 SING N N 7 XE9 CL1 C15 SING N N 8 XE9 C16 C15 DOUB Y N 9 XE9 C16 N2 SING Y N 10 XE9 C15 C14 SING Y N 11 XE9 N2 C11 DOUB Y N 12 XE9 C14 C10 DOUB Y N 13 XE9 C11 C10 SING Y N 14 XE9 C11 C12 SING Y N 15 XE9 C10 C9 SING Y N 16 XE9 C12 C13 DOUB Y N 17 XE9 C9 C8 DOUB Y N 18 XE9 C13 C8 SING Y N 19 XE9 C8 C4 SING N N 20 XE9 C4 C3 DOUB Y N 21 XE9 C4 C5 SING Y N 22 XE9 C3 C2 SING Y N 23 XE9 C5 C6 DOUB Y N 24 XE9 C2 C1 DOUB Y N 25 XE9 C6 C1 SING Y N 26 XE9 C6 C7 SING N N 27 XE9 N1 C7 SING N N 28 XE9 N1 H7 SING N N 29 XE9 N1 H8 SING N N 30 XE9 C5 H4 SING N N 31 XE9 C7 H5 SING N N 32 XE9 C7 H6 SING N N 33 XE9 C13 H12 SING N N 34 XE9 C17 H14 SING N N 35 XE9 C17 H15 SING N N 36 XE9 C20 H23 SING N N 37 XE9 C20 H22 SING N N 38 XE9 C1 H1 SING N N 39 XE9 C12 H11 SING N N 40 XE9 C14 H13 SING N N 41 XE9 C18 H17 SING N N 42 XE9 C18 H16 SING N N 43 XE9 C19 H20 SING N N 44 XE9 C19 H21 SING N N 45 XE9 C2 H2 SING N N 46 XE9 C3 H3 SING N N 47 XE9 C9 H10 SING N N 48 XE9 N4 H19 SING N N 49 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor XE9 InChI InChI 1.06 "InChI=1S/C20H21ClN4/c21-18-12-17-11-16(15-3-1-2-14(10-15)13-22)4-5-19(17)24-20(18)25-8-6-23-7-9-25/h1-5,10-12,23H,6-9,13,22H2" XE9 InChIKey InChI 1.06 PMBAQAZUQBDHLD-UHFFFAOYSA-N XE9 SMILES_CANONICAL CACTVS 3.385 "NCc1cccc(c1)c2ccc3nc(N4CCNCC4)c(Cl)cc3c2" XE9 SMILES CACTVS 3.385 "NCc1cccc(c1)c2ccc3nc(N4CCNCC4)c(Cl)cc3c2" XE9 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(cc(c1)c2ccc3c(c2)cc(c(n3)N4CCNCC4)Cl)CN" XE9 SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(cc(c1)c2ccc3c(c2)cc(c(n3)N4CCNCC4)Cl)CN" # _pdbx_chem_comp_identifier.comp_id XE9 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "[3-(3-chloranyl-2-piperazin-1-yl-quinolin-6-yl)phenyl]methanamine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site XE9 "Create component" 2023-10-31 PDBE XE9 "Initial release" 2024-11-06 RCSB #