data_XET # _chem_comp.id XET _chem_comp.name "[6-(methanesulfonyl)-1,6-diazaspiro[3.3]heptan-1-yl][2-({[3-(propan-2-yl)-5-(trifluoromethoxy)phenyl]methyl}amino)pyrimidin-5-yl]methanone" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C22 H26 F3 N5 O4 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-06-06 _chem_comp.pdbx_modified_date 2024-12-13 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 513.533 _chem_comp.one_letter_code ? _chem_comp.three_letter_code XET _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7G3I _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal XET C11 C1 C 0 1 N N N N N N -11.612 8.455 41.823 6.453 2.910 -0.058 C11 XET 1 XET C15 C2 C 0 1 N N N N N N -14.140 4.884 45.322 2.913 -0.559 -0.665 C15 XET 2 XET C17 C3 C 0 1 Y N N N N N -14.861 7.033 46.282 0.868 -0.567 0.709 C17 XET 3 XET C19 C4 C 0 1 Y N N N N N -15.608 8.937 47.267 -1.032 -0.571 2.009 C19 XET 4 XET C20 C5 C 0 1 Y N N N N N -14.311 9.295 47.631 -1.810 -0.500 0.846 C20 XET 5 XET C21 C6 C 0 1 Y N N N N N -13.326 8.380 47.271 -1.152 -0.465 -0.391 C21 XET 6 XET C23 C7 C 0 1 N N N N N N -14.136 10.544 48.430 -3.283 -0.462 0.921 C23 XET 7 XET C26 C8 C 0 1 N N N N N N -11.490 10.503 48.620 -3.710 -0.737 -1.638 C26 XET 8 XET C27 C9 C 0 1 N N N N N N -11.057 11.768 49.384 -5.163 -1.232 -1.777 C27 XET 9 XET C28 C10 C 0 1 N N N N N N -12.492 12.174 49.488 -5.445 -0.418 -0.515 C28 XET 10 XET C1 C11 C 0 1 N N N N N N -10.088 2.167 43.343 8.181 -3.249 -1.320 C1 XET 11 XET C2 C12 C 0 1 N N N N N N -10.590 3.044 42.205 7.145 -3.187 -0.196 C2 XET 12 XET C3 C13 C 0 1 N N N N N N -11.155 2.205 41.072 7.848 -3.342 1.154 C3 XET 13 XET C4 C14 C 0 1 Y N N N N N -11.557 4.148 42.626 6.432 -1.860 -0.241 C4 XET 14 XET C5 C15 C 0 1 Y N N N N N -12.393 4.035 43.735 5.063 -1.817 -0.423 C5 XET 15 XET C6 C16 C 0 1 Y N N N N N -13.266 5.057 44.109 4.406 -0.601 -0.466 C6 XET 16 XET C7 C17 C 0 1 Y N N N N N -13.254 6.244 43.402 5.117 0.574 -0.325 C7 XET 17 XET C8 C18 C 0 1 Y N N N N N -12.453 6.351 42.285 6.492 0.534 -0.142 C8 XET 18 XET C9 C19 C 0 1 Y N N N N N -11.613 5.319 41.891 7.148 -0.687 -0.095 C9 XET 19 XET O10 O1 O 0 1 N N N N N N -12.517 7.509 41.567 7.194 1.690 -0.004 O10 XET 20 XET F12 F1 F 0 1 N N N N N N -11.799 9.524 41.063 5.502 2.923 0.968 F12 XET 21 XET F13 F2 F 0 1 N N N N N N -11.642 8.799 43.066 7.324 3.993 0.100 F13 XET 22 XET F14 F3 F 0 1 N N N N N N -10.385 8.067 41.624 5.806 3.008 -1.295 F14 XET 23 XET N16 N1 N 0 1 N N N N N N -15.134 5.897 45.624 2.245 -0.596 0.638 N16 XET 24 XET N18 N2 N 0 1 Y N N N N N -15.909 7.822 46.593 0.283 -0.603 1.899 N18 XET 25 XET N22 N3 N 0 1 Y N N N N N -13.573 7.252 46.600 0.167 -0.500 -0.416 N22 XET 26 XET O24 O2 O 0 1 N N N N N N -15.102 11.234 48.677 -3.834 -0.373 2.001 O24 XET 27 XET N25 N4 N 0 1 N N N N N N -12.900 10.890 48.858 -4.017 -0.527 -0.207 N25 XET 28 XET C29 C20 C 0 1 N N N N N N -12.987 13.539 48.940 -6.514 -0.849 0.489 C29 XET 29 XET N30 N5 N 0 1 N N N N N N -13.312 13.943 50.336 -7.348 0.213 -0.112 N30 XET 30 XET C31 C21 C 0 1 N N N N N N -13.079 12.570 50.867 -6.148 0.937 -0.580 C31 XET 31 XET S32 S1 S 0 1 N N N N N N -14.544 14.905 50.796 -8.979 0.483 -0.220 S32 XET 32 XET O33 O3 O 0 1 N N N N N N -14.316 15.212 52.171 -9.126 1.277 -1.389 O33 XET 33 XET O34 O4 O 0 1 N N N N N N -14.618 15.969 49.846 -9.555 -0.813 -0.138 O34 XET 34 XET C35 C22 C 0 1 N N N N N N -16.019 13.965 50.674 -9.375 1.452 1.262 C35 XET 35 XET H47 H1 H 0 1 N N N N N N -14.677 3.932 45.199 2.642 0.360 -1.186 H47 XET 36 XET H46 H2 H 0 1 N N N N N N -13.472 4.818 46.194 2.601 -1.418 -1.258 H46 XET 37 XET H49 H3 H 0 1 N N N N N N -16.416 9.598 47.545 -1.502 -0.600 2.981 H49 XET 38 XET H50 H4 H 0 1 N N N N N N -12.305 8.594 47.550 -1.716 -0.410 -1.310 H50 XET 39 XET H51 H5 H 0 1 N N N N N N -11.191 9.558 49.097 -2.963 -1.511 -1.816 H51 XET 40 XET H52 H6 H 0 1 N N N N N N -11.195 10.488 47.560 -3.505 0.184 -2.184 H52 XET 41 XET H53 H7 H 0 1 N N N N N N -10.573 11.568 50.351 -5.672 -0.857 -2.665 H53 XET 42 XET H54 H8 H 0 1 N N N N N N -10.433 12.459 48.798 -5.276 -2.308 -1.642 H54 XET 43 XET H36 H9 H 0 1 N N N N N N -9.686 2.802 44.146 8.904 -2.443 -1.193 H36 XET 44 XET H38 H10 H 0 1 N N N N N N -10.920 1.563 43.735 8.696 -4.208 -1.288 H38 XET 45 XET H37 H11 H 0 1 N N N N N N -9.295 1.501 42.971 7.680 -3.138 -2.282 H37 XET 46 XET H39 H12 H 0 1 N N N N N N -9.704 3.553 41.797 6.422 -3.992 -0.323 H39 XET 47 XET H42 H13 H 0 1 N N N N N N -11.509 2.866 40.267 8.572 -2.537 1.282 H42 XET 48 XET H41 H14 H 0 1 N N N N N N -10.371 1.540 40.682 7.111 -3.299 1.955 H41 XET 49 XET H40 H15 H 0 1 N N N N N N -11.995 1.602 41.446 8.364 -4.302 1.187 H40 XET 50 XET H43 H16 H 0 1 N N N N N N -12.364 3.129 44.323 4.505 -2.736 -0.533 H43 XET 51 XET H44 H17 H 0 1 N N N N N N -13.864 7.077 43.720 4.604 1.524 -0.359 H44 XET 52 XET H45 H18 H 0 1 N N N N N N -11.001 5.430 41.008 8.217 -0.721 0.052 H45 XET 53 XET H48 H19 H 0 1 N N N N N N -15.514 6.177 44.743 2.771 -0.642 1.452 H48 XET 54 XET H56 H20 H 0 1 N N N N N N -12.205 14.147 48.462 -6.895 -1.856 0.322 H56 XET 55 XET H55 H21 H 0 1 N N N N N N -13.858 13.471 48.272 -6.244 -0.660 1.528 H55 XET 56 XET H58 H22 H 0 1 N N N N N N -13.996 12.028 51.143 -5.766 1.666 0.136 H58 XET 57 XET H57 H23 H 0 1 N N N N N N -12.360 12.520 51.698 -6.240 1.337 -1.589 H57 XET 58 XET H60 H24 H 0 1 N N N N N N -16.876 14.585 50.978 -8.807 2.382 1.251 H60 XET 59 XET H59 H25 H 0 1 N N N N N N -16.157 13.633 49.634 -10.442 1.677 1.273 H59 XET 60 XET H61 H26 H 0 1 N N N N N N -15.950 13.087 51.333 -9.116 0.878 2.151 H61 XET 61 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal XET C1 C2 SING N N 1 XET C2 C3 SING N N 2 XET C2 C4 SING N N 3 XET C4 C5 DOUB Y N 4 XET C4 C9 SING Y N 5 XET C5 C6 SING Y N 6 XET C6 C7 DOUB Y N 7 XET C6 C15 SING N N 8 XET C7 C8 SING Y N 9 XET C8 C9 DOUB Y N 10 XET C8 O10 SING N N 11 XET O10 C11 SING N N 12 XET C11 F12 SING N N 13 XET C11 F13 SING N N 14 XET C11 F14 SING N N 15 XET C15 N16 SING N N 16 XET N16 C17 SING N N 17 XET C17 N18 DOUB Y N 18 XET C17 N22 SING Y N 19 XET N18 C19 SING Y N 20 XET C19 C20 DOUB Y N 21 XET C20 C21 SING Y N 22 XET C20 C23 SING N N 23 XET C21 N22 DOUB Y N 24 XET C23 O24 DOUB N N 25 XET C23 N25 SING N N 26 XET N25 C26 SING N N 27 XET N25 C28 SING N N 28 XET C26 C27 SING N N 29 XET C27 C28 SING N N 30 XET C28 C29 SING N N 31 XET C28 C31 SING N N 32 XET C29 N30 SING N N 33 XET N30 C31 SING N N 34 XET N30 S32 SING N N 35 XET S32 O33 DOUB N N 36 XET S32 O34 DOUB N N 37 XET S32 C35 SING N N 38 XET C15 H47 SING N N 39 XET C15 H46 SING N N 40 XET C19 H49 SING N N 41 XET C21 H50 SING N N 42 XET C26 H51 SING N N 43 XET C26 H52 SING N N 44 XET C27 H53 SING N N 45 XET C27 H54 SING N N 46 XET C1 H36 SING N N 47 XET C1 H38 SING N N 48 XET C1 H37 SING N N 49 XET C2 H39 SING N N 50 XET C3 H42 SING N N 51 XET C3 H41 SING N N 52 XET C3 H40 SING N N 53 XET C5 H43 SING N N 54 XET C7 H44 SING N N 55 XET C9 H45 SING N N 56 XET N16 H48 SING N N 57 XET C29 H56 SING N N 58 XET C29 H55 SING N N 59 XET C31 H58 SING N N 60 XET C31 H57 SING N N 61 XET C35 H60 SING N N 62 XET C35 H59 SING N N 63 XET C35 H61 SING N N 64 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor XET SMILES ACDLabs 12.01 "O=S(C)(=O)N1CC2(CCN2C(=O)c2cnc(NCc3cc(cc(OC(F)(F)F)c3)C(C)C)nc2)C1" XET InChI InChI 1.06 "InChI=1S/C22H26F3N5O4S/c1-14(2)16-6-15(7-18(8-16)34-22(23,24)25)9-26-20-27-10-17(11-28-20)19(31)30-5-4-21(30)12-29(13-21)35(3,32)33/h6-8,10-11,14H,4-5,9,12-13H2,1-3H3,(H,26,27,28)" XET InChIKey InChI 1.06 AJGQSOQDPFCOEY-UHFFFAOYSA-N XET SMILES_CANONICAL CACTVS 3.385 "CC(C)c1cc(CNc2ncc(cn2)C(=O)N3CCC34CN(C4)[S](C)(=O)=O)cc(OC(F)(F)F)c1" XET SMILES CACTVS 3.385 "CC(C)c1cc(CNc2ncc(cn2)C(=O)N3CCC34CN(C4)[S](C)(=O)=O)cc(OC(F)(F)F)c1" XET SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)c1cc(cc(c1)OC(F)(F)F)CNc2ncc(cn2)C(=O)N3CCC34CN(C4)S(=O)(=O)C" XET SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)c1cc(cc(c1)OC(F)(F)F)CNc2ncc(cn2)C(=O)N3CCC34CN(C4)S(=O)(=O)C" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier XET "SYSTEMATIC NAME" ACDLabs 12.01 "[6-(methanesulfonyl)-1,6-diazaspiro[3.3]heptan-1-yl][2-({[3-(propan-2-yl)-5-(trifluoromethoxy)phenyl]methyl}amino)pyrimidin-5-yl]methanone" XET "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(6-methylsulfonyl-1,6-diazaspiro[3.3]heptan-1-yl)-[2-[[3-propan-2-yl-5-(trifluoromethyloxy)phenyl]methylamino]pyrimidin-5-yl]methanone" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site XET "Create component" 2023-06-06 RCSB XET "Initial release" 2024-12-18 RCSB #