data_XF3 # _chem_comp.id XF3 _chem_comp.name "1-[5-{2-cyclopropyl-6-[(oxan-4-yl)methoxy]pyridine-4-carbonyl}-3,4,5,6-tetrahydropyrrolo[3,4-c]pyrrole-2(1H)-carbonyl]piperidine-4-sulfonamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C27 H37 N5 O6 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-06-06 _chem_comp.pdbx_modified_date 2024-12-13 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 559.678 _chem_comp.one_letter_code ? _chem_comp.three_letter_code XF3 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7G2Q _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal XF3 C10 C1 C 0 1 N N N N N N -12.463 10.721 49.910 -0.525 2.360 0.351 C10 XF3 1 XF3 C11 C2 C 0 1 N N N N N N -11.481 11.464 50.754 -1.891 1.717 0.449 C11 XF3 2 XF3 C15 C3 C 0 1 Y N N N N N -13.035 7.078 45.945 3.343 0.854 0.073 C15 XF3 3 XF3 C16 C4 C 0 1 Y N N N N N -12.243 6.882 44.831 4.175 -0.251 -0.053 C16 XF3 4 XF3 C18 C5 C 0 1 Y N N N N N -11.909 9.112 44.497 6.033 1.091 -0.333 C18 XF3 5 XF3 C19 C6 C 0 1 Y N N N N N -12.701 9.427 45.580 5.277 2.240 -0.230 C19 XF3 6 XF3 C20 C7 C 0 1 N N N N N N -11.206 10.110 43.700 7.519 1.198 -0.563 C20 XF3 7 XF3 C21 C8 C 0 1 N N N N N N -10.027 9.733 42.834 8.000 1.350 -2.007 C21 XF3 8 XF3 C22 C9 C 0 1 N N N N N N -11.342 10.124 42.204 8.063 2.542 -1.051 C22 XF3 9 XF3 C24 C10 C 0 1 N N N N N N -11.273 5.302 43.381 4.555 -2.595 -0.111 C24 XF3 10 XF3 C25 C11 C 0 1 N N N N N N -11.204 3.781 43.287 3.785 -3.912 0.005 C25 XF3 11 XF3 C26 C12 C 0 1 N N N N N N -10.614 3.486 41.925 4.731 -5.085 -0.265 C26 XF3 12 XF3 C27 C13 C 0 1 N N N N N N -10.370 1.957 41.786 3.971 -6.400 -0.070 C27 XF3 13 XF3 N1 N1 N 0 1 N N N N N N -10.615 12.397 53.509 -4.775 1.468 0.785 N1 XF3 14 XF3 C2 C14 C 0 1 N N N N N N -11.942 12.207 53.187 -4.221 2.677 0.563 C2 XF3 15 XF3 O3 O1 O 0 1 N N N N N N -12.833 12.536 54.020 -4.930 3.657 0.437 O3 XF3 16 XF3 N4 N2 N 0 1 N N N N N N -12.304 11.708 51.950 -2.881 2.799 0.480 N4 XF3 17 XF3 C5 C15 C 0 1 N N N N N N -13.743 11.436 51.703 -2.106 4.042 0.401 C5 XF3 18 XF3 C6 C16 C 0 1 N N N N N N -13.679 10.674 50.426 -0.645 3.656 0.324 C6 XF3 19 XF3 C7 C17 C 0 1 N N N N N N -14.632 9.905 49.602 0.721 4.300 0.226 C7 XF3 20 XF3 N8 N3 N 0 1 N N N N N N -13.720 9.522 48.437 1.711 3.218 0.195 N8 XF3 21 XF3 C9 C18 C 0 1 N N N N N N -12.343 10.010 48.630 0.935 1.974 0.269 C9 XF3 22 XF3 C12 C19 C 0 1 N N N N N N -14.170 8.713 47.433 3.050 3.340 0.112 C12 XF3 23 XF3 O13 O2 O 0 1 N N N N N N -15.335 8.272 47.446 3.563 4.441 0.141 O13 XF3 24 XF3 C14 C20 C 0 1 Y N N N N N -13.269 8.359 46.317 3.898 2.131 -0.016 C14 XF3 25 XF3 N17 N4 N 0 1 Y N N N N N -11.697 7.844 44.108 5.473 -0.101 -0.248 N17 XF3 26 XF3 O23 O3 O 0 1 N N N N N N -12.039 5.579 44.527 3.648 -1.499 0.027 O23 XF3 27 XF3 O28 O4 O 0 1 N N N N N N -9.513 1.501 42.825 3.439 -6.448 1.255 O28 XF3 28 XF3 C29 C21 C 0 1 N N N N N N -10.057 1.722 44.126 2.511 -5.403 1.550 C29 XF3 29 XF3 C30 C22 C 0 1 N N N N N N -10.281 3.234 44.379 3.212 -4.048 1.420 C30 XF3 30 XF3 C31 C23 C 0 1 N N N N N N -10.153 13.316 54.564 -3.955 0.250 0.747 C31 XF3 31 XF3 C32 C24 C 0 1 N N N N N N -8.761 13.712 54.148 -4.593 -0.743 -0.229 C32 XF3 32 XF3 C33 C25 C 0 1 N N N N N N -7.821 12.501 54.285 -6.051 -0.980 0.171 C33 XF3 33 XF3 C34 C26 C 0 1 N N N N N N -8.357 11.363 53.408 -6.824 0.338 0.093 C34 XF3 34 XF3 C35 C27 C 0 1 N N N N N N -9.868 11.081 53.688 -6.210 1.345 1.077 C35 XF3 35 XF3 S36 S1 S 0 1 N N N N N N -6.150 12.905 53.856 -6.799 -2.188 -0.957 S36 XF3 36 XF3 O37 O5 O 0 1 N N N N N N -5.651 13.872 54.778 -6.830 -1.678 -2.283 O37 XF3 37 XF3 O38 O6 O 0 1 N N N N N N -5.410 11.615 53.748 -6.310 -3.494 -0.685 O38 XF3 38 XF3 N39 N5 N 0 1 N N N N N N -6.370 13.587 52.392 -8.391 -2.245 -0.504 N39 XF3 39 XF3 H47 H1 H 0 1 N N N N N N -11.163 12.404 50.279 -2.064 1.080 -0.419 H47 XF3 40 XF3 H46 H2 H 0 1 N N N N N N -10.596 10.852 50.985 -1.957 1.125 1.362 H46 XF3 41 XF3 H48 H3 H 0 1 N N N N N N -13.450 6.246 46.495 2.282 0.727 0.234 H48 XF3 42 XF3 H49 H4 H 0 1 N N N N N N -12.883 10.455 45.858 5.743 3.211 -0.313 H49 XF3 43 XF3 H50 H5 H 0 1 N N N N N N -11.129 11.107 44.159 8.143 0.618 0.117 H50 XF3 44 XF3 H51 H6 H 0 1 N N N N N N -9.160 10.406 42.761 8.942 0.871 -2.277 H51 XF3 45 XF3 H52 H7 H 0 1 N N N N N N -9.685 8.688 42.793 7.243 1.373 -2.791 H52 XF3 46 XF3 H54 H8 H 0 1 N N N N N N -11.958 9.364 41.701 7.347 3.349 -1.204 H54 XF3 47 XF3 H53 H9 H 0 1 N N N N N N -11.432 11.081 41.669 9.045 2.848 -0.691 H53 XF3 48 XF3 H56 H10 H 0 1 N N N N N N -11.757 5.720 42.486 5.308 -2.545 0.676 H56 XF3 49 XF3 H55 H11 H 0 1 N N N N N N -10.263 5.726 43.483 5.042 -2.544 -1.084 H55 XF3 50 XF3 H57 H12 H 0 1 N N N N N N -12.209 3.343 43.378 2.972 -3.924 -0.721 H57 XF3 51 XF3 H59 H13 H 0 1 N N N N N N -11.313 3.818 41.143 5.101 -5.027 -1.289 H59 XF3 52 XF3 H58 H14 H 0 1 N N N N N N -9.659 4.021 41.815 5.571 -5.043 0.429 H58 XF3 53 XF3 H60 H15 H 0 1 N N N N N N -11.332 1.428 41.850 3.157 -6.459 -0.791 H60 XF3 54 XF3 H61 H16 H 0 1 N N N N N N -9.902 1.751 40.812 4.651 -7.239 -0.219 H61 XF3 55 XF3 H40 H17 H 0 1 N N N N N N -14.183 10.833 52.511 -2.390 4.600 -0.491 H40 XF3 56 XF3 H41 H18 H 0 1 N N N N N N -14.315 12.368 51.588 -2.284 4.647 1.291 H41 XF3 57 XF3 H42 H19 H 0 1 N N N N N N -15.010 9.019 50.134 0.787 4.890 -0.688 H42 XF3 58 XF3 H43 H20 H 0 1 N N N N N N -15.479 10.524 49.272 0.894 4.936 1.094 H43 XF3 59 XF3 H44 H21 H 0 1 N N N N N N -11.627 9.178 48.698 1.217 1.414 1.161 H44 XF3 60 XF3 H45 H22 H 0 1 N N N N N N -12.040 10.689 47.820 1.115 1.372 -0.622 H45 XF3 61 XF3 H63 H23 H 0 1 N N N N N N -11.020 1.196 44.209 1.677 -5.449 0.850 H63 XF3 62 XF3 H62 H24 H 0 1 N N N N N N -9.359 1.330 44.880 2.139 -5.523 2.567 H62 XF3 63 XF3 H65 H25 H 0 1 N N N N N N -9.316 3.762 44.347 4.021 -3.985 2.148 H65 XF3 64 XF3 H64 H26 H 0 1 N N N N N N -10.747 3.380 45.365 2.495 -3.247 1.601 H64 XF3 65 XF3 H67 H27 H 0 1 N N N N N N -10.806 14.199 54.622 -2.948 0.498 0.410 H67 XF3 66 XF3 H66 H28 H 0 1 N N N N N N -10.136 12.808 55.540 -3.910 -0.192 1.742 H66 XF3 67 XF3 H69 H29 H 0 1 N N N N N N -8.773 14.050 53.101 -4.555 -0.337 -1.239 H69 XF3 68 XF3 H68 H30 H 0 1 N N N N N N -8.404 14.528 54.793 -4.049 -1.687 -0.195 H68 XF3 69 XF3 H70 H31 H 0 1 N N N N N N -7.805 12.173 55.335 -6.090 -1.363 1.191 H70 XF3 70 XF3 H72 H32 H 0 1 N N N N N N -8.236 11.641 52.350 -6.764 0.735 -0.921 H72 XF3 71 XF3 H71 H33 H 0 1 N N N N N N -7.779 10.450 53.616 -7.867 0.165 0.355 H71 XF3 72 XF3 H73 H34 H 0 1 N N N N N N -9.998 10.711 54.716 -6.345 0.990 2.099 H73 XF3 73 XF3 H74 H35 H 0 1 N N N N N N -10.249 10.332 52.978 -6.692 2.315 0.958 H74 XF3 74 XF3 H76 H36 H 0 1 N N N N N N -5.486 13.871 52.020 -9.075 -2.447 -1.162 H76 XF3 75 XF3 H75 H37 H 0 1 N N N N N N -6.794 12.923 51.775 -8.639 -2.076 0.418 H75 XF3 76 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal XF3 N1 C2 SING N N 1 XF3 N1 C31 SING N N 2 XF3 N1 C35 SING N N 3 XF3 C2 O3 DOUB N N 4 XF3 C2 N4 SING N N 5 XF3 N4 C5 SING N N 6 XF3 N4 C11 SING N N 7 XF3 C5 C6 SING N N 8 XF3 C6 C7 SING N N 9 XF3 C6 C10 DOUB N N 10 XF3 C7 N8 SING N N 11 XF3 N8 C9 SING N N 12 XF3 N8 C12 SING N N 13 XF3 C9 C10 SING N N 14 XF3 C10 C11 SING N N 15 XF3 C12 O13 DOUB N N 16 XF3 C12 C14 SING N N 17 XF3 C14 C15 DOUB Y N 18 XF3 C14 C19 SING Y N 19 XF3 C15 C16 SING Y N 20 XF3 C16 N17 DOUB Y N 21 XF3 C16 O23 SING N N 22 XF3 N17 C18 SING Y N 23 XF3 C18 C19 DOUB Y N 24 XF3 C18 C20 SING N N 25 XF3 C20 C21 SING N N 26 XF3 C20 C22 SING N N 27 XF3 C21 C22 SING N N 28 XF3 O23 C24 SING N N 29 XF3 C24 C25 SING N N 30 XF3 C25 C26 SING N N 31 XF3 C25 C30 SING N N 32 XF3 C26 C27 SING N N 33 XF3 C27 O28 SING N N 34 XF3 O28 C29 SING N N 35 XF3 C29 C30 SING N N 36 XF3 C31 C32 SING N N 37 XF3 C32 C33 SING N N 38 XF3 C33 C34 SING N N 39 XF3 C33 S36 SING N N 40 XF3 C34 C35 SING N N 41 XF3 S36 O37 DOUB N N 42 XF3 S36 O38 DOUB N N 43 XF3 S36 N39 SING N N 44 XF3 C11 H47 SING N N 45 XF3 C11 H46 SING N N 46 XF3 C15 H48 SING N N 47 XF3 C19 H49 SING N N 48 XF3 C20 H50 SING N N 49 XF3 C21 H51 SING N N 50 XF3 C21 H52 SING N N 51 XF3 C22 H54 SING N N 52 XF3 C22 H53 SING N N 53 XF3 C24 H56 SING N N 54 XF3 C24 H55 SING N N 55 XF3 C25 H57 SING N N 56 XF3 C26 H59 SING N N 57 XF3 C26 H58 SING N N 58 XF3 C27 H60 SING N N 59 XF3 C27 H61 SING N N 60 XF3 C5 H40 SING N N 61 XF3 C5 H41 SING N N 62 XF3 C7 H42 SING N N 63 XF3 C7 H43 SING N N 64 XF3 C9 H44 SING N N 65 XF3 C9 H45 SING N N 66 XF3 C29 H63 SING N N 67 XF3 C29 H62 SING N N 68 XF3 C30 H65 SING N N 69 XF3 C30 H64 SING N N 70 XF3 C31 H67 SING N N 71 XF3 C31 H66 SING N N 72 XF3 C32 H69 SING N N 73 XF3 C32 H68 SING N N 74 XF3 C33 H70 SING N N 75 XF3 C34 H72 SING N N 76 XF3 C34 H71 SING N N 77 XF3 C35 H73 SING N N 78 XF3 C35 H74 SING N N 79 XF3 N39 H76 SING N N 80 XF3 N39 H75 SING N N 81 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor XF3 SMILES ACDLabs 12.01 "NS(=O)(=O)C1CCN(CC1)C(=O)N1CC=2CN(CC=2C1)C(=O)c1cc(OCC2CCOCC2)nc(c1)C1CC1" XF3 InChI InChI 1.06 "InChI=1S/C27H37N5O6S/c28-39(35,36)23-3-7-30(8-4-23)27(34)32-15-21-13-31(14-22(21)16-32)26(33)20-11-24(19-1-2-19)29-25(12-20)38-17-18-5-9-37-10-6-18/h11-12,18-19,23H,1-10,13-17H2,(H2,28,35,36)" XF3 InChIKey InChI 1.06 YTKPJLNOKGGLQF-UHFFFAOYSA-N XF3 SMILES_CANONICAL CACTVS 3.385 "N[S](=O)(=O)C1CCN(CC1)C(=O)N2CC3=C(C2)CN(C3)C(=O)c4cc(OCC5CCOCC5)nc(c4)C6CC6" XF3 SMILES CACTVS 3.385 "N[S](=O)(=O)C1CCN(CC1)C(=O)N2CC3=C(C2)CN(C3)C(=O)c4cc(OCC5CCOCC5)nc(c4)C6CC6" XF3 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1c(cc(nc1C2CC2)OCC3CCOCC3)C(=O)N4CC5=C(C4)CN(C5)C(=O)N6CCC(CC6)S(=O)(=O)N" XF3 SMILES "OpenEye OEToolkits" 2.0.7 "c1c(cc(nc1C2CC2)OCC3CCOCC3)C(=O)N4CC5=C(C4)CN(C5)C(=O)N6CCC(CC6)S(=O)(=O)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier XF3 "SYSTEMATIC NAME" ACDLabs 12.01 "1-[5-{2-cyclopropyl-6-[(oxan-4-yl)methoxy]pyridine-4-carbonyl}-3,4,5,6-tetrahydropyrrolo[3,4-c]pyrrole-2(1H)-carbonyl]piperidine-4-sulfonamide" XF3 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "1-[[2-[2-cyclopropyl-6-(oxan-4-ylmethoxy)pyridin-4-yl]carbonyl-1,3,4,6-tetrahydropyrrolo[3,4-c]pyrrol-5-yl]carbonyl]piperidine-4-sulfonamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site XF3 "Create component" 2023-06-06 RCSB XF3 "Initial release" 2024-12-18 RCSB #