data_XFO # _chem_comp.id XFO _chem_comp.name "1-(2-{2-cyclopropyl-6-[(oxan-4-yl)methoxy]pyridine-4-carbonyl}-1,2,3,4,5,6-hexahydrocyclopenta[c]pyrrole-5-carbonyl)piperidine-4-sulfonamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C28 H38 N4 O6 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-06-06 _chem_comp.pdbx_modified_date 2024-12-13 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 558.690 _chem_comp.one_letter_code ? _chem_comp.three_letter_code XFO _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7G2X _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal XFO C10 C1 C 0 1 N N N N N N -8.671 12.195 53.059 -7.648 -0.584 -0.446 C10 XFO 1 XFO O12 O1 O 0 1 N N N N N N -7.247 13.257 51.389 -8.458 0.952 1.580 O12 XFO 2 XFO C15 C2 C 0 1 N N N N N N -9.575 13.433 53.089 -6.498 0.343 -0.846 C15 XFO 3 XFO C16 C3 C 0 1 N N N N N N -11.014 13.049 53.397 -5.419 -0.470 -1.568 C16 XFO 4 XFO C18 C4 C 0 1 N N N N N N -15.269 9.688 48.034 -0.616 2.323 0.097 C18 XFO 5 XFO C20 C5 C 0 1 N N N N N N -12.951 9.668 47.230 0.888 0.542 -0.045 C20 XFO 6 XFO C21 C6 C 0 1 N N N N N N -14.790 8.482 46.000 1.839 2.845 0.345 C21 XFO 7 XFO C23 C7 C 0 1 Y N N N N N -13.852 8.075 44.893 3.234 2.354 0.259 C23 XFO 8 XFO C24 C8 C 0 1 Y N N N N N -13.648 6.754 44.551 3.508 0.992 0.123 C24 XFO 9 XFO C25 C9 C 0 1 Y N N N N N -12.801 6.502 43.477 4.831 0.576 0.046 C25 XFO 10 XFO C27 C10 C 0 1 Y N N N N N -12.476 8.738 43.024 5.598 2.747 0.222 C27 XFO 11 XFO C28 C11 C 0 1 Y N N N N N -13.305 9.074 44.089 4.313 3.244 0.305 C28 XFO 12 XFO C1 C12 C 0 1 N N N N N N -12.178 11.075 49.461 -1.261 -1.274 -0.453 C1 XFO 13 XFO C2 C13 C 0 1 N N N N N N -13.081 10.413 48.518 -0.529 0.036 -0.217 C2 XFO 14 XFO C3 C14 C 0 1 N N N N N N -14.337 10.400 48.961 -1.368 1.031 -0.137 C3 XFO 15 XFO C4 C15 C 0 1 N N N N N N -14.460 11.080 50.300 -2.798 0.547 -0.307 C4 XFO 16 XFO C5 C16 C 0 1 N N N N N N -13.005 11.058 50.785 -2.668 -0.857 -0.935 C5 XFO 17 XFO C6 C17 C 0 1 N N N N N N -12.607 12.194 51.697 -3.722 -1.791 -0.398 C6 XFO 18 XFO N7 N1 N 0 1 N N N N N N -11.492 12.022 52.457 -5.019 -1.592 -0.708 N7 XFO 19 XFO C8 C18 C 0 1 N N N N N N -10.641 10.810 52.486 -6.058 -2.493 -0.193 C8 XFO 20 XFO C9 C19 C 0 1 N N N N N N -9.191 11.111 52.109 -7.130 -1.657 0.514 C9 XFO 21 XFO S11 S1 S 0 1 N N N N N N -6.998 12.673 52.674 -8.946 0.383 0.373 S11 XFO 22 XFO O13 O2 O 0 1 N N N N N N -6.405 13.437 53.727 -9.655 1.170 -0.574 O13 XFO 23 XFO N14 N2 N 0 1 N N N N N N -6.201 11.353 52.547 -10.050 -0.747 0.872 N14 XFO 24 XFO O17 O3 O 0 1 N N N N N N -13.253 13.237 51.706 -3.404 -2.720 0.313 O17 XFO 25 XFO N19 N3 N 0 1 N N N N N N -14.321 9.236 46.999 0.812 1.993 0.153 N19 XFO 26 XFO O22 O4 O 0 1 N N N N N N -15.964 8.155 45.923 1.620 4.015 0.588 O22 XFO 27 XFO N26 N4 N 0 1 Y N N N N N -12.253 7.451 42.717 5.819 1.453 0.100 N26 XFO 28 XFO C29 C20 C 0 1 N N N N N N -11.863 9.795 42.139 6.766 3.698 0.272 C29 XFO 29 XFO C30 C21 C 0 1 N N N N N N -10.540 9.517 41.481 7.198 4.355 -1.040 C30 XFO 30 XFO C31 C22 C 0 1 N N N N N N -11.773 9.530 40.666 6.480 5.181 0.029 C31 XFO 31 XFO O32 O5 O 0 1 N N N N N N -12.567 5.203 43.197 5.112 -0.744 -0.086 O32 XFO 32 XFO C33 C23 C 0 1 N N N N N N -11.778 4.912 42.015 6.492 -1.110 -0.160 C33 XFO 33 XFO C34 C24 C 0 1 N N N N N N -11.685 3.402 41.866 6.611 -2.628 -0.305 C34 XFO 34 XFO C35 C25 C 0 1 N N N N N N -11.114 2.987 40.510 8.080 -3.010 -0.509 C35 XFO 35 XFO C36 C26 C 0 1 N N N N N N -10.887 1.470 40.465 8.198 -4.535 -0.575 C36 XFO 36 XFO O37 O6 O 0 1 N N N N N N -10.003 1.055 41.506 7.669 -5.104 0.624 O37 XFO 37 XFO C38 C27 C 0 1 N N N N N N -10.530 1.372 42.816 6.285 -4.820 0.843 C38 XFO 38 XFO C39 C28 C 0 1 N N N N N N -10.792 2.862 42.968 6.090 -3.307 0.966 C39 XFO 39 XFO H49 H1 H 0 1 N N N N N N -8.632 11.773 54.074 -8.057 -1.060 -1.337 H49 XFO 40 XFO H52 H2 H 0 1 N N N N N N -9.213 14.124 53.865 -6.873 1.122 -1.511 H52 XFO 41 XFO H53 H3 H 0 1 N N N N N N -9.537 13.930 52.108 -6.072 0.801 0.047 H53 XFO 42 XFO H55 H4 H 0 1 N N N N N N -11.652 13.941 53.312 -5.818 -0.854 -2.507 H55 XFO 43 XFO H54 H5 H 0 1 N N N N N N -11.071 12.654 54.422 -4.557 0.165 -1.770 H54 XFO 44 XFO H56 H6 H 0 1 N N N N N N -15.765 8.840 48.529 -0.805 3.016 -0.722 H56 XFO 45 XFO H57 H7 H 0 1 N N N N N N -16.029 10.367 47.620 -0.930 2.771 1.041 H57 XFO 46 XFO H59 H8 H 0 1 N N N N N N -12.596 10.324 46.422 1.346 0.072 0.825 H59 XFO 47 XFO H58 H9 H 0 1 N N N N N N -12.271 8.809 47.331 1.472 0.318 -0.938 H58 XFO 48 XFO H60 H10 H 0 1 N N N N N N -14.125 5.951 45.093 2.703 0.273 0.079 H60 XFO 49 XFO H61 H11 H 0 1 N N N N N N -13.526 10.111 44.294 4.143 4.306 0.405 H61 XFO 50 XFO H41 H12 H 0 1 N N N N N N -11.238 10.515 49.572 -0.754 -1.858 -1.221 H41 XFO 51 XFO H40 H13 H 0 1 N N N N N N -11.956 12.105 49.144 -1.330 -1.842 0.474 H40 XFO 52 XFO H43 H14 H 0 1 N N N N N N -14.834 12.109 50.196 -3.296 0.486 0.661 H43 XFO 53 XFO H42 H15 H 0 1 N N N N N N -15.119 10.517 50.978 -3.347 1.212 -0.975 H42 XFO 54 XFO H44 H16 H 0 1 N N N N N N -12.818 10.103 51.299 -2.710 -0.805 -2.023 H44 XFO 55 XFO H45 H17 H 0 1 N N N N N N -10.662 10.387 53.501 -6.509 -3.042 -1.020 H45 XFO 56 XFO H46 H18 H 0 1 N N N N N N -11.047 10.076 51.774 -5.616 -3.194 0.515 H46 XFO 57 XFO H47 H19 H 0 1 N N N N N N -8.582 10.201 52.212 -6.698 -1.181 1.394 H47 XFO 58 XFO H48 H20 H 0 1 N N N N N N -9.142 11.470 51.070 -7.954 -2.303 0.817 H48 XFO 59 XFO H50 H21 H 0 1 N N N N N N -5.247 11.559 52.330 -9.897 -1.687 0.691 H50 XFO 60 XFO H51 H22 H 0 1 N N N N N N -6.246 10.852 53.412 -10.850 -0.468 1.344 H51 XFO 61 XFO H62 H23 H 0 1 N N N N N N -12.047 10.838 42.435 7.547 3.447 0.990 H62 XFO 62 XFO H64 H24 H 0 1 N N N N N N -9.801 10.324 41.371 8.263 4.537 -1.186 H64 XFO 63 XFO H63 H25 H 0 1 N N N N N N -10.020 8.567 41.674 6.638 4.100 -1.940 H63 XFO 64 XFO H66 H26 H 0 1 N N N N N N -12.167 8.590 40.253 5.448 5.470 -0.167 H66 XFO 65 XFO H65 H27 H 0 1 N N N N N N -11.948 10.347 39.950 7.073 5.906 0.587 H65 XFO 66 XFO H68 H28 H 0 1 N N N N N N -12.263 5.345 41.128 6.951 -0.625 -1.021 H68 XFO 67 XFO H67 H29 H 0 1 N N N N N N -10.770 5.338 42.126 7.001 -0.791 0.750 H67 XFO 68 XFO H69 H30 H 0 1 N N N N N N -12.690 2.969 41.976 6.025 -2.959 -1.163 H69 XFO 69 XFO H71 H31 H 0 1 N N N N N N -11.821 3.271 39.717 8.443 -2.576 -1.441 H71 XFO 70 XFO H70 H32 H 0 1 N N N N N N -10.155 3.502 40.348 8.673 -2.634 0.324 H70 XFO 71 XFO H72 H33 H 0 1 N N N N N N -11.853 0.958 40.587 7.638 -4.906 -1.433 H72 XFO 72 XFO H73 H34 H 0 1 N N N N N N -10.450 1.200 39.492 9.247 -4.814 -0.677 H73 XFO 73 XFO H75 H35 H 0 1 N N N N N N -11.474 0.827 42.963 5.700 -5.195 0.004 H75 XFO 74 XFO H74 H36 H 0 1 N N N N N N -9.803 1.058 43.579 5.956 -5.305 1.762 H74 XFO 75 XFO H77 H37 H 0 1 N N N N N N -9.831 3.396 42.938 6.643 -2.937 1.829 H77 XFO 76 XFO H76 H38 H 0 1 N N N N N N -11.280 3.039 43.938 5.030 -3.085 1.089 H76 XFO 77 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal XFO C1 C2 SING N N 1 XFO C1 C5 SING N N 2 XFO C2 C3 DOUB N N 3 XFO C2 C20 SING N N 4 XFO C3 C4 SING N N 5 XFO C3 C18 SING N N 6 XFO C4 C5 SING N N 7 XFO C5 C6 SING N N 8 XFO C6 N7 SING N N 9 XFO C6 O17 DOUB N N 10 XFO N7 C8 SING N N 11 XFO N7 C16 SING N N 12 XFO C8 C9 SING N N 13 XFO C9 C10 SING N N 14 XFO C10 S11 SING N N 15 XFO C10 C15 SING N N 16 XFO S11 O12 DOUB N N 17 XFO S11 O13 DOUB N N 18 XFO S11 N14 SING N N 19 XFO C15 C16 SING N N 20 XFO C18 N19 SING N N 21 XFO N19 C20 SING N N 22 XFO N19 C21 SING N N 23 XFO C21 O22 DOUB N N 24 XFO C21 C23 SING N N 25 XFO C23 C24 DOUB Y N 26 XFO C23 C28 SING Y N 27 XFO C24 C25 SING Y N 28 XFO C25 N26 DOUB Y N 29 XFO C25 O32 SING N N 30 XFO N26 C27 SING Y N 31 XFO C27 C28 DOUB Y N 32 XFO C27 C29 SING N N 33 XFO C29 C30 SING N N 34 XFO C29 C31 SING N N 35 XFO C30 C31 SING N N 36 XFO O32 C33 SING N N 37 XFO C33 C34 SING N N 38 XFO C34 C35 SING N N 39 XFO C34 C39 SING N N 40 XFO C35 C36 SING N N 41 XFO C36 O37 SING N N 42 XFO O37 C38 SING N N 43 XFO C38 C39 SING N N 44 XFO C10 H49 SING N N 45 XFO C15 H52 SING N N 46 XFO C15 H53 SING N N 47 XFO C16 H55 SING N N 48 XFO C16 H54 SING N N 49 XFO C18 H56 SING N N 50 XFO C18 H57 SING N N 51 XFO C20 H59 SING N N 52 XFO C20 H58 SING N N 53 XFO C24 H60 SING N N 54 XFO C28 H61 SING N N 55 XFO C1 H41 SING N N 56 XFO C1 H40 SING N N 57 XFO C4 H43 SING N N 58 XFO C4 H42 SING N N 59 XFO C5 H44 SING N N 60 XFO C8 H45 SING N N 61 XFO C8 H46 SING N N 62 XFO C9 H47 SING N N 63 XFO C9 H48 SING N N 64 XFO N14 H50 SING N N 65 XFO N14 H51 SING N N 66 XFO C29 H62 SING N N 67 XFO C30 H64 SING N N 68 XFO C30 H63 SING N N 69 XFO C31 H66 SING N N 70 XFO C31 H65 SING N N 71 XFO C33 H68 SING N N 72 XFO C33 H67 SING N N 73 XFO C34 H69 SING N N 74 XFO C35 H71 SING N N 75 XFO C35 H70 SING N N 76 XFO C36 H72 SING N N 77 XFO C36 H73 SING N N 78 XFO C38 H75 SING N N 79 XFO C38 H74 SING N N 80 XFO C39 H77 SING N N 81 XFO C39 H76 SING N N 82 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor XFO SMILES ACDLabs 12.01 "NS(=O)(=O)C1CCN(CC1)C(=O)C1CC=2CN(CC=2C1)C(=O)c1cc(OCC2CCOCC2)nc(c1)C1CC1" XFO InChI InChI 1.06 "InChI=1S/C28H38N4O6S/c29-39(35,36)24-3-7-31(8-4-24)27(33)20-11-22-15-32(16-23(22)12-20)28(34)21-13-25(19-1-2-19)30-26(14-21)38-17-18-5-9-37-10-6-18/h13-14,18-20,24H,1-12,15-17H2,(H2,29,35,36)" XFO InChIKey InChI 1.06 WFZJNKMOAPOAFU-UHFFFAOYSA-N XFO SMILES_CANONICAL CACTVS 3.385 "N[S](=O)(=O)C1CCN(CC1)C(=O)C2CC3=C(C2)CN(C3)C(=O)c4cc(OCC5CCOCC5)nc(c4)C6CC6" XFO SMILES CACTVS 3.385 "N[S](=O)(=O)C1CCN(CC1)C(=O)C2CC3=C(C2)CN(C3)C(=O)c4cc(OCC5CCOCC5)nc(c4)C6CC6" XFO SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1c(cc(nc1C2CC2)OCC3CCOCC3)C(=O)N4CC5=C(C4)CC(C5)C(=O)N6CCC(CC6)S(=O)(=O)N" XFO SMILES "OpenEye OEToolkits" 2.0.7 "c1c(cc(nc1C2CC2)OCC3CCOCC3)C(=O)N4CC5=C(C4)CC(C5)C(=O)N6CCC(CC6)S(=O)(=O)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier XFO "SYSTEMATIC NAME" ACDLabs 12.01 "1-(2-{2-cyclopropyl-6-[(oxan-4-yl)methoxy]pyridine-4-carbonyl}-1,2,3,4,5,6-hexahydrocyclopenta[c]pyrrole-5-carbonyl)piperidine-4-sulfonamide" XFO "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "1-[[2-[2-cyclopropyl-6-(oxan-4-ylmethoxy)pyridin-4-yl]carbonyl-3,4,5,6-tetrahydro-1~{H}-cyclopenta[c]pyrrol-5-yl]carbonyl]piperidine-4-sulfonamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site XFO "Create component" 2023-06-06 RCSB XFO "Initial release" 2024-12-18 RCSB #