data_XI5 # _chem_comp.id XI5 _chem_comp.name "[(2~{S})-1-[[1-[(4-ethanoylphenyl)amino]-3-methyl-1-oxidanylidene-butan-2-yl]amino]-4-methyl-1-oxidanylidene-pentan-2-yl]phosphonic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C19 H29 N2 O6 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-11-02 _chem_comp.pdbx_modified_date 2024-10-11 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 412.417 _chem_comp.one_letter_code ? _chem_comp.three_letter_code XI5 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8R1B _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal XI5 C01 C1 C 0 1 N N N N N N -9.695 -10.731 24.647 8.361 -0.169 -0.287 C01 XI5 1 XI5 C02 C2 C 0 1 N N N N N N -10.358 -11.011 23.308 7.170 0.754 -0.310 C02 XI5 2 XI5 C03 C3 C 0 1 Y N N N N N -10.091 -10.096 22.113 5.830 0.231 -0.012 C03 XI5 3 XI5 C04 C4 C 0 1 Y N N N N N -9.217 -10.505 21.117 5.669 -1.102 0.386 C04 XI5 4 XI5 C05 C5 C 0 1 Y N N N N N -8.982 -9.684 20.028 4.416 -1.585 0.664 C05 XI5 5 XI5 C06 C6 C 0 1 Y N N N N N -9.616 -8.453 19.926 3.306 -0.753 0.549 C06 XI5 6 XI5 C08 C7 C 0 1 N N N N N N -10.304 -6.817 18.066 0.963 -0.775 0.165 C08 XI5 7 XI5 C09 C8 C 0 1 N N S N N N -9.835 -6.031 16.805 -0.408 -1.331 0.451 C09 XI5 8 XI5 C10 C9 C 0 1 N N N N N N -10.932 -5.878 15.777 -0.655 -2.557 -0.430 C10 XI5 9 XI5 C11 C10 C 0 1 N N N N N N -10.831 -6.823 14.597 -1.985 -3.206 -0.040 C11 XI5 10 XI5 C12 C11 C 0 1 N N N N N N -10.909 -4.415 15.298 -0.708 -2.128 -1.898 C12 XI5 11 XI5 C14 C12 C 0 1 N N N N N N -7.420 -5.972 16.169 -2.615 -0.353 0.780 C14 XI5 12 XI5 C15 C13 C 0 1 N N S N N N -6.039 -6.491 15.748 -3.655 0.697 0.482 C15 XI5 13 XI5 C20 C14 C 0 1 N N N N N N -5.968 -6.957 14.314 -4.528 0.234 -0.685 C20 XI5 14 XI5 C21 C15 C 0 1 N N N N N N -6.505 -5.922 13.332 -5.262 -1.051 -0.294 C21 XI5 15 XI5 C22 C16 C 0 1 N N N N N N -7.462 -6.641 12.361 -6.127 -0.788 0.941 C22 XI5 16 XI5 C23 C17 C 0 1 N N N N N N -5.396 -5.159 12.616 -6.153 -1.502 -1.454 C23 XI5 17 XI5 C26 C18 C 0 1 Y N N N N N -10.491 -8.038 20.922 3.461 0.572 0.154 C26 XI5 18 XI5 C27 C19 C 0 1 Y N N N N N -10.725 -8.863 22.017 4.711 1.066 -0.120 C27 XI5 19 XI5 N07 N1 N 0 1 N N N N N N -9.325 -7.643 18.757 2.035 -1.249 0.831 N07 XI5 20 XI5 N13 N2 N 0 1 N N N N N N -8.632 -6.751 16.346 -1.418 -0.310 0.161 N13 XI5 21 XI5 O17 O1 O 0 1 N N N N N N -5.404 -9.151 16.276 -2.034 2.067 -1.194 O17 XI5 22 XI5 O18 O2 O 0 1 N N N N N N -6.581 -8.049 18.088 -3.938 3.401 -0.211 O18 XI5 23 XI5 O19 O3 O 0 1 N N N N N N -4.223 -7.333 17.585 -1.857 2.713 1.240 O19 XI5 24 XI5 O24 O4 O 0 1 N N N N N N -7.485 -4.846 16.317 -2.856 -1.236 1.575 O24 XI5 25 XI5 O25 O5 O 0 1 N N N N N N -11.420 -6.769 18.450 1.103 0.099 -0.664 O25 XI5 26 XI5 O28 O6 O 0 1 N N N N N N -11.087 -11.947 23.188 7.318 1.928 -0.575 O28 XI5 27 XI5 P16 P1 P 0 1 N N N N N N -5.551 -7.814 16.992 -2.829 2.261 0.039 P16 XI5 28 XI5 H013 H1 H 0 0 N N N N N N -10.006 -11.493 25.377 8.049 -1.156 0.053 H013 XI5 29 XI5 H012 H2 H 0 0 N N N N N N -8.602 -10.761 24.528 8.780 -0.246 -1.290 H012 XI5 30 XI5 H011 H3 H 0 0 N N N N N N -9.997 -9.736 25.005 9.115 0.228 0.392 H011 XI5 31 XI5 H041 H4 H 0 0 N N N N N N -8.721 -11.462 21.191 6.530 -1.748 0.475 H041 XI5 32 XI5 H051 H5 H 0 0 N N N N N N -8.301 -10.003 19.253 4.291 -2.613 0.971 H051 XI5 33 XI5 H091 H6 H 0 0 N N N N N N -9.535 -5.026 17.135 -0.472 -1.618 1.500 H091 XI5 34 XI5 H101 H7 H 0 0 N N N N N N -11.897 -6.054 16.275 0.154 -3.274 -0.290 H101 XI5 35 XI5 H112 H8 H 0 0 N N N N N N -10.849 -7.862 14.956 -2.805 -2.535 -0.295 H112 XI5 36 XI5 H111 H9 H 0 0 N N N N N N -11.681 -6.655 13.919 -2.102 -4.146 -0.580 H111 XI5 37 XI5 H113 H10 H 0 0 N N N N N N -9.890 -6.638 14.058 -1.993 -3.399 1.033 H113 XI5 38 XI5 H123 H11 H 0 0 N N N N N N -10.983 -3.743 16.166 0.239 -1.666 -2.176 H123 XI5 39 XI5 H121 H12 H 0 0 N N N N N N -9.968 -4.219 14.762 -0.884 -3.002 -2.526 H121 XI5 40 XI5 H122 H13 H 0 0 N N N N N N -11.759 -4.237 14.623 -1.517 -1.412 -2.038 H122 XI5 41 XI5 H151 H14 H 0 0 N N N N N N -5.306 -5.683 15.892 -4.278 0.852 1.363 H151 XI5 42 XI5 H202 H15 H 0 0 N N N N N N -4.918 -7.168 14.064 -5.256 1.009 -0.925 H202 XI5 43 XI5 H201 H16 H 0 0 N N N N N N -6.561 -7.878 14.214 -3.900 0.042 -1.556 H201 XI5 44 XI5 H211 H17 H 0 0 N N N N N N -7.098 -5.193 13.904 -4.535 -1.831 -0.069 H211 XI5 45 XI5 H221 H18 H 0 0 N N N N N N -7.866 -5.916 11.639 -6.862 -0.017 0.712 H221 XI5 46 XI5 H222 H19 H 0 0 N N N N N N -6.914 -7.428 11.822 -6.640 -1.706 1.227 H222 XI5 47 XI5 H223 H20 H 0 0 N N N N N N -8.289 -7.092 12.929 -5.494 -0.454 1.763 H223 XI5 48 XI5 H232 H21 H 0 0 N N N N N N -5.840 -4.429 11.923 -5.537 -1.689 -2.333 H232 XI5 49 XI5 H233 H22 H 0 0 N N N N N N -4.777 -4.631 13.357 -6.676 -2.417 -1.175 H233 XI5 50 XI5 H231 H23 H 0 0 N N N N N N -4.770 -5.866 12.052 -6.880 -0.722 -1.678 H231 XI5 51 XI5 H261 H24 H 0 0 N N N N N N -10.986 -7.081 20.847 2.597 1.214 0.066 H261 XI5 52 XI5 H271 H25 H 0 0 N N N N N N -11.402 -8.544 22.796 4.831 2.096 -0.422 H271 XI5 53 XI5 H071 H26 H 0 0 N N N N N N -8.390 -7.653 18.403 1.921 -1.936 1.507 H071 XI5 54 XI5 H131 H27 H 0 0 N N N N N N -8.651 -7.734 16.164 -1.226 0.396 -0.475 H131 XI5 55 XI5 H1 H28 H 0 1 N N N N N N -6.875 -8.952 18.059 -4.510 3.233 -0.973 H1 XI5 56 XI5 H2 H29 H 0 1 N N N N N N -3.542 -7.967 17.394 -1.162 2.073 1.446 H2 XI5 57 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal XI5 C02 C01 SING N N 1 XI5 C04 C03 DOUB Y N 2 XI5 C05 C04 SING Y N 3 XI5 C06 C05 DOUB Y N 4 XI5 C08 N07 SING N N 5 XI5 C11 C10 SING N N 6 XI5 C12 C10 SING N N 7 XI5 C10 C09 SING N N 8 XI5 N13 C09 SING N N 9 XI5 C14 N13 SING N N 10 XI5 O17 P16 DOUB N N 11 XI5 O18 P16 SING N N 12 XI5 O19 P16 SING N N 13 XI5 P16 C15 SING N N 14 XI5 C20 C15 SING N N 15 XI5 C21 C20 SING N N 16 XI5 C22 C21 SING N N 17 XI5 C23 C21 SING N N 18 XI5 C15 C14 SING N N 19 XI5 O24 C14 DOUB N N 20 XI5 C09 C08 SING N N 21 XI5 O25 C08 DOUB N N 22 XI5 N07 C06 SING N N 23 XI5 C26 C06 SING Y N 24 XI5 C27 C26 DOUB Y N 25 XI5 C03 C02 SING N N 26 XI5 O28 C02 DOUB N N 27 XI5 C03 C27 SING Y N 28 XI5 C01 H013 SING N N 29 XI5 C01 H012 SING N N 30 XI5 C01 H011 SING N N 31 XI5 C04 H041 SING N N 32 XI5 C05 H051 SING N N 33 XI5 C09 H091 SING N N 34 XI5 C10 H101 SING N N 35 XI5 C11 H112 SING N N 36 XI5 C11 H111 SING N N 37 XI5 C11 H113 SING N N 38 XI5 C12 H123 SING N N 39 XI5 C12 H121 SING N N 40 XI5 C12 H122 SING N N 41 XI5 C15 H151 SING N N 42 XI5 C20 H202 SING N N 43 XI5 C20 H201 SING N N 44 XI5 C21 H211 SING N N 45 XI5 C22 H221 SING N N 46 XI5 C22 H222 SING N N 47 XI5 C22 H223 SING N N 48 XI5 C23 H232 SING N N 49 XI5 C23 H233 SING N N 50 XI5 C23 H231 SING N N 51 XI5 C26 H261 SING N N 52 XI5 C27 H271 SING N N 53 XI5 N07 H071 SING N N 54 XI5 N13 H131 SING N N 55 XI5 O18 H1 SING N N 56 XI5 O19 H2 SING N N 57 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor XI5 InChI InChI 1.06 "InChI=1S/C19H29N2O6P/c1-11(2)10-16(28(25,26)27)18(23)21-17(12(3)4)19(24)20-15-8-6-14(7-9-15)13(5)22/h6-9,11-12,16-17H,10H2,1-5H3,(H,20,24)(H,21,23)(H2,25,26,27)/t16-,17-/m0/s1" XI5 InChIKey InChI 1.06 NDYKWZBIJQYUHB-IRXDYDNUSA-N XI5 SMILES_CANONICAL CACTVS 3.385 "CC(C)C[C@@H](C(=O)N[C@@H](C(C)C)C(=O)Nc1ccc(cc1)C(C)=O)[P](O)(O)=O" XI5 SMILES CACTVS 3.385 "CC(C)C[CH](C(=O)N[CH](C(C)C)C(=O)Nc1ccc(cc1)C(C)=O)[P](O)(O)=O" XI5 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)C[C@@H](C(=O)NC(C(C)C)C(=O)Nc1ccc(cc1)C(=O)C)P(=O)(O)O" XI5 SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)CC(C(=O)NC(C(C)C)C(=O)Nc1ccc(cc1)C(=O)C)P(=O)(O)O" # _pdbx_chem_comp_identifier.comp_id XI5 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "[(2~{S})-1-[[1-[(4-ethanoylphenyl)amino]-3-methyl-1-oxidanylidene-butan-2-yl]amino]-4-methyl-1-oxidanylidene-pentan-2-yl]phosphonic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site XI5 "Create component" 2023-11-02 PDBE XI5 "Initial release" 2024-10-16 RCSB #