data_XIH
#
_chem_comp.id XIH
_chem_comp.name "2-({8-[(3R)-3-AMINOPIPERIDIN-1-YL]-1,3-DIMETHYL-2,6-DIOXO-1,2,3,6-TETRAHYDRO-7H-PURIN-7-YL}METHYL)BENZONITRILE"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C20 H23 N7 O2"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2006-03-29
_chem_comp.pdbx_modified_date 2011-06-04
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 393.442
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code XIH
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 2GBI
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
XIH C5 C5 C 0 1 Y N N 17.130 40.577 -80.062 1.180 0.626 0.332 C5 XIH 1
XIH C6 C6 C 0 1 Y N N 17.211 40.161 -78.782 0.769 1.833 -0.223 C6 XIH 2
XIH C8 C8 C 0 1 Y N N 15.177 39.509 -79.495 -1.020 0.679 0.203 C8 XIH 3
XIH C10 C10 C 0 1 N N N 12.968 38.927 -78.302 -2.740 0.524 1.694 C10 XIH 4
XIH C13 C13 C 0 1 N N R 12.919 36.866 -80.465 -4.591 0.984 -0.450 C13 XIH 5
XIH C15 C15 C 0 1 N N N 13.273 38.312 -80.708 -3.096 1.305 -0.508 C15 XIH 6
XIH C17 C17 C 0 1 N N N 15.359 40.448 -81.909 -0.054 -1.435 1.186 C17 XIH 7
XIH C20 C20 C 0 1 Y N N 15.701 39.237 -85.479 -1.397 -3.476 -1.693 C20 XIH 8
XIH C21 C21 C 0 1 Y N N 16.187 37.929 -85.366 -0.354 -4.353 -1.933 C21 XIH 9
XIH C22 C22 C 0 1 Y N N 16.434 37.342 -84.107 0.792 -4.292 -1.168 C22 XIH 10
XIH C24 C24 C 0 1 N N N 16.482 37.337 -81.740 2.086 -3.272 0.647 C24 XIH 11
XIH C28 C28 C 0 1 Y N N 19.539 41.127 -78.557 3.036 2.488 -0.404 C28 XIH 12
XIH C C C 0 1 N N N 20.548 42.276 -80.528 4.877 1.075 0.309 C XIH 13
XIH N N N 0 1 Y N N 19.408 41.538 -79.882 3.444 1.325 0.131 N XIH 14
XIH C3 C3 C 0 1 Y N N 18.296 41.318 -80.664 2.554 0.380 0.500 C3 XIH 15
XIH O O O 0 1 N N N 18.206 41.698 -81.864 2.938 -0.674 0.977 O XIH 16
XIH N7 N7 N 0 1 Y N N 15.968 39.468 -78.416 -0.563 1.817 -0.279 N7 XIH 17
XIH N9 N9 N 0 1 N N N 13.826 38.948 -79.521 -2.348 0.330 0.294 N9 XIH 18
XIH C11 C11 C 0 1 N N N 12.451 37.481 -78.021 -4.216 0.161 1.874 C11 XIH 19
XIH C12 C12 C 0 1 N N N 11.897 36.799 -79.295 -5.072 1.085 1.002 C12 XIH 20
XIH N14 N14 N 0 1 N N N 12.435 36.235 -81.705 -5.332 1.944 -1.279 N14 XIH 21
XIH N16 N16 N 0 1 Y N N 15.797 40.157 -80.553 0.024 -0.096 0.597 N16 XIH 22
XIH C18 C18 C 0 1 Y N N 15.696 39.435 -83.006 -0.159 -2.462 0.088 C18 XIH 23
XIH C19 C19 C 0 1 Y N N 15.465 39.970 -84.308 -1.299 -2.533 -0.685 C19 XIH 24
XIH C23 C23 C 0 1 Y N N 16.195 38.069 -82.935 0.900 -3.340 -0.152 C23 XIH 25
XIH N25 N25 N 0 1 N N N 16.616 36.742 -80.775 3.027 -3.217 1.281 N25 XIH 26
XIH N26 N26 N 0 1 Y N N 18.443 40.437 -78.003 1.731 2.762 -0.588 N26 XIH 27
XIH C27 C27 C 0 1 N N N 18.494 39.964 -76.604 1.326 4.042 -1.174 C27 XIH 28
XIH O29 O29 O 0 1 N N N 20.569 41.333 -77.868 3.867 3.314 -0.731 O29 XIH 29
XIH H101 1H10 H 0 0 N N N 13.558 39.272 -77.440 -2.130 -0.114 2.333 H101 XIH 30
XIH H102 2H10 H 0 0 N N N 12.104 39.589 -78.463 -2.587 1.567 1.972 H102 XIH 31
XIH H13 H13 H 0 1 N N N 13.808 36.290 -80.169 -4.762 -0.026 -0.821 H13 XIH 32
XIH H151 1H15 H 0 0 N N N 14.022 38.359 -81.512 -2.924 2.306 -0.113 H151 XIH 33
XIH H152 2H15 H 0 0 N N N 12.351 38.846 -80.982 -2.756 1.260 -1.542 H152 XIH 34
XIH H171 1H17 H 0 0 N N N 15.834 41.397 -82.198 0.842 -1.625 1.777 H171 XIH 35
XIH H172 2H17 H 0 0 N N N 14.260 40.447 -81.855 -0.933 -1.499 1.828 H172 XIH 36
XIH H20 H20 H 0 1 N N N 15.512 39.672 -86.449 -2.292 -3.527 -2.296 H20 XIH 37
XIH H21 H21 H 0 1 N N N 16.377 37.357 -86.262 -0.437 -5.086 -2.722 H21 XIH 38
XIH H22 H22 H 0 1 N N N 16.808 36.331 -84.048 1.605 -4.978 -1.356 H22 XIH 39
XIH H1 1H H 0 1 N N N 20.315 42.456 -81.588 5.442 1.937 -0.046 H1 XIH 40
XIH H2 2H H 0 1 N N N 20.698 43.238 -80.017 5.088 0.912 1.366 H2 XIH 41
XIH H3 3H H 0 1 N N N 21.465 41.673 -80.452 5.165 0.192 -0.261 H3 XIH 42
XIH H111 1H11 H 0 0 N N N 11.645 37.536 -77.275 -4.375 -0.875 1.573 H111 XIH 43
XIH H112 2H11 H 0 0 N N N 13.300 36.882 -77.658 -4.496 0.284 2.920 H112 XIH 44
XIH H121 1H12 H 0 0 N N N 10.974 37.313 -79.600 -6.116 0.779 1.062 H121 XIH 45
XIH H122 2H12 H 0 0 N N N 11.701 35.741 -79.065 -4.970 2.113 1.349 H122 XIH 46
XIH H141 1H14 H 0 0 N N N 12.325 36.932 -82.413 -6.308 1.697 -1.207 H141 XIH 47
XIH H142 2H14 H 0 0 N N N 13.097 35.550 -82.011 -5.228 2.847 -0.842 H142 XIH 48
XIH H19 H19 H 0 1 N N N 15.093 40.980 -84.395 -2.117 -1.852 -0.504 H19 XIH 49
XIH H271 1H27 H 0 0 N N N 18.507 38.864 -76.588 2.213 4.636 -1.395 H271 XIH 50
XIH H272 2H27 H 0 0 N N N 19.404 40.348 -76.120 0.772 3.861 -2.095 H272 XIH 51
XIH H273 3H27 H 0 0 N N N 17.609 40.328 -76.062 0.694 4.581 -0.469 H273 XIH 52
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
XIH C5 C6 DOUB Y N 1
XIH C5 C3 SING Y N 2
XIH C5 N16 SING Y N 3
XIH C6 N7 SING Y N 4
XIH C6 N26 SING Y N 5
XIH C8 N7 DOUB Y N 6
XIH C8 N9 SING N N 7
XIH C8 N16 SING Y N 8
XIH C10 N9 SING N N 9
XIH C10 C11 SING N N 10
XIH C10 H101 SING N N 11
XIH C10 H102 SING N N 12
XIH C13 C15 SING N N 13
XIH C13 C12 SING N N 14
XIH C13 N14 SING N N 15
XIH C13 H13 SING N N 16
XIH C15 N9 SING N N 17
XIH C15 H151 SING N N 18
XIH C15 H152 SING N N 19
XIH C17 N16 SING N N 20
XIH C17 C18 SING N N 21
XIH C17 H171 SING N N 22
XIH C17 H172 SING N N 23
XIH C20 C21 DOUB Y N 24
XIH C20 C19 SING Y N 25
XIH C20 H20 SING N N 26
XIH C21 C22 SING Y N 27
XIH C21 H21 SING N N 28
XIH C22 C23 DOUB Y N 29
XIH C22 H22 SING N N 30
XIH C24 C23 SING N N 31
XIH C24 N25 TRIP N N 32
XIH C28 N SING Y N 33
XIH C28 N26 SING Y N 34
XIH C28 O29 DOUB N N 35
XIH C N SING N N 36
XIH C H1 SING N N 37
XIH C H2 SING N N 38
XIH C H3 SING N N 39
XIH N C3 SING Y N 40
XIH C3 O DOUB N N 41
XIH C11 C12 SING N N 42
XIH C11 H111 SING N N 43
XIH C11 H112 SING N N 44
XIH C12 H121 SING N N 45
XIH C12 H122 SING N N 46
XIH N14 H141 SING N N 47
XIH N14 H142 SING N N 48
XIH C18 C19 DOUB Y N 49
XIH C18 C23 SING Y N 50
XIH C19 H19 SING N N 51
XIH N26 C27 SING N N 52
XIH C27 H271 SING N N 53
XIH C27 H272 SING N N 54
XIH C27 H273 SING N N 55
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
XIH SMILES ACDLabs 10.04 "N#Cc1ccccc1Cn2c4c(nc2N3CCCC(N)C3)N(C(=O)N(C4=O)C)C"
XIH SMILES_CANONICAL CACTVS 3.341 "CN1C(=O)N(C)c2nc(N3CCC[C@@H](N)C3)n(Cc4ccccc4C#N)c2C1=O"
XIH SMILES CACTVS 3.341 "CN1C(=O)N(C)c2nc(N3CCC[CH](N)C3)n(Cc4ccccc4C#N)c2C1=O"
XIH SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CN1c2c(n(c(n2)N3CCC[C@H](C3)N)Cc4ccccc4C#N)C(=O)N(C1=O)C"
XIH SMILES "OpenEye OEToolkits" 1.5.0 "CN1c2c(n(c(n2)N3CCCC(C3)N)Cc4ccccc4C#N)C(=O)N(C1=O)C"
XIH InChI InChI 1.03 "InChI=1S/C20H23N7O2/c1-24-17-16(18(28)25(2)20(24)29)27(11-14-7-4-3-6-13(14)10-21)19(23-17)26-9-5-8-15(22)12-26/h3-4,6-7,15H,5,8-9,11-12,22H2,1-2H3/t15-/m1/s1"
XIH InChIKey InChI 1.03 XJNKUWDMCBZMTG-OAHLLOKOSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
XIH "SYSTEMATIC NAME" ACDLabs 10.04 "2-({8-[(3R)-3-aminopiperidin-1-yl]-1,3-dimethyl-2,6-dioxo-1,2,3,6-tetrahydro-7H-purin-7-yl}methyl)benzonitrile"
XIH "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "2-[[8-[(3R)-3-aminopiperidin-1-yl]-1,3-dimethyl-2,6-dioxo-purin-7-yl]methyl]benzonitrile"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
XIH "Create component" 2006-03-29 RCSB
XIH "Modify descriptor" 2011-06-04 RCSB
#