data_XII # _chem_comp.id XII _chem_comp.name "(3R)-3,5,5-trihydroxy-3-methylpentanoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C6 H12 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-06-06 _chem_comp.pdbx_modified_date 2024-03-15 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 164.156 _chem_comp.one_letter_code ? _chem_comp.three_letter_code XII _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8SZ6 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal XII C02 C1 C 0 1 N N R N N N 96.941 131.925 132.205 -0.053 0.090 -0.042 C02 XII 1 XII C03 C2 C 0 1 N N N N N N 97.585 132.761 133.398 -0.120 -0.177 -1.547 C03 XII 2 XII C04 C3 C 0 1 N N N N N N 97.884 132.092 131.043 -1.273 0.908 0.386 C04 XII 3 XII C05 C4 C 0 1 N N N N N N 99.300 131.491 131.349 -2.530 0.139 0.068 C05 XII 4 XII C08 C5 C 0 1 N N N N N N 95.652 132.357 131.563 1.223 0.871 0.281 C08 XII 5 XII C09 C6 C 0 1 N N N N N N 94.430 132.383 132.486 2.436 0.110 -0.259 C09 XII 6 XII O01 O1 O 0 1 N N N N N N 96.813 130.495 132.639 -0.042 -1.153 0.663 O01 XII 7 XII O02 O2 O 0 1 N N N N N N 93.237 132.339 131.749 3.615 0.893 -0.062 O02 XII 8 XII O06 O3 O 0 1 N N N N N N 99.432 130.559 132.184 -3.730 0.666 0.358 O06 XII 9 XII O07 O4 O 0 1 N N N N N N 100.189 131.962 130.783 -2.457 -0.951 -0.447 O07 XII 10 XII O10 O5 O 0 1 N N N N N N 94.431 131.227 133.294 2.567 -1.132 0.435 O10 XII 11 XII H1 H1 H 0 1 N N N N N N 96.944 132.684 134.288 -1.029 -0.734 -1.776 H1 XII 12 XII H2 H2 H 0 1 N N N N N N 98.583 132.360 133.629 -0.129 0.771 -2.084 H2 XII 13 XII H3 H3 H 0 1 N N N N N N 97.673 133.816 133.100 0.749 -0.760 -1.852 H3 XII 14 XII H4 H4 H 0 1 N N N N N N 97.992 133.165 130.824 -1.225 1.099 1.458 H4 XII 15 XII H5 H5 H 0 1 N N N N N N 97.462 131.580 130.166 -1.281 1.856 -0.152 H5 XII 16 XII H6 H6 H 0 1 N N N N N N 95.796 133.372 131.163 1.174 1.855 -0.185 H6 XII 17 XII H7 H7 H 0 1 N N N N N N 95.437 131.664 130.736 1.316 0.984 1.361 H7 XII 18 XII H8 H8 H 0 1 N N N N N N 96.211 130.439 133.371 0.000 -1.060 1.625 H8 XII 19 XII H9 H9 H 0 1 N N N N N N 92.496 132.356 132.343 4.425 0.472 -0.381 H9 XII 20 XII H10 H10 H 0 1 N N N N N N 100.350 130.327 132.258 -4.507 0.135 0.136 H10 XII 21 XII H11 H11 H 0 1 N N N N N N 93.674 131.240 133.868 2.691 -1.038 1.390 H11 XII 22 XII H12 H12 H 0 1 N N N N N N 94.471 133.290 133.107 2.301 -0.081 -1.324 H12 XII 23 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal XII O07 C05 DOUB N N 1 XII C04 C05 SING N N 2 XII C04 C02 SING N N 3 XII C05 O06 SING N N 4 XII C08 C02 SING N N 5 XII C08 C09 SING N N 6 XII O02 C09 SING N N 7 XII C02 O01 SING N N 8 XII C02 C03 SING N N 9 XII C09 O10 SING N N 10 XII C03 H1 SING N N 11 XII C03 H2 SING N N 12 XII C03 H3 SING N N 13 XII C04 H4 SING N N 14 XII C04 H5 SING N N 15 XII C08 H6 SING N N 16 XII C08 H7 SING N N 17 XII O01 H8 SING N N 18 XII O02 H9 SING N N 19 XII O06 H10 SING N N 20 XII O10 H11 SING N N 21 XII C09 H12 SING N N 22 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor XII SMILES ACDLabs 12.01 "OC(=O)CC(O)(C)CC(O)O" XII InChI InChI 1.06 "InChI=1S/C6H12O5/c1-6(11,2-4(7)8)3-5(9)10/h4,7-8,11H,2-3H2,1H3,(H,9,10)/t6-/m1/s1" XII InChIKey InChI 1.06 LENSSSSJMZWHIU-ZCFIWIBFSA-N XII SMILES_CANONICAL CACTVS 3.385 "C[C@@](O)(CC(O)O)CC(O)=O" XII SMILES CACTVS 3.385 "C[C](O)(CC(O)O)CC(O)=O" XII SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@@](CC(O)O)(CC(=O)O)O" XII SMILES "OpenEye OEToolkits" 2.0.7 "CC(CC(O)O)(CC(=O)O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier XII "SYSTEMATIC NAME" ACDLabs 12.01 "(3R)-3,5,5-trihydroxy-3-methylpentanoic acid" XII "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(3~{R})-3-methyl-3,5,5-tris(oxidanyl)pentanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site XII "Create component" 2023-06-06 RCSB XII "Initial release" 2024-03-20 RCSB #