data_XIO # _chem_comp.id XIO _chem_comp.name "[(2~{S})-2-[[4-(2-azanylethanoylamino)-7-[[(2~{S})-3-[2-(4-nitrophenyl)sulfanyl-1~{H}-indol-3-yl]-1-oxidanylidene-1-sodiooxy-propan-2-yl]amino]-4-[3-[[(2~{S})-3-[2-(4-nitrophenyl)sulfanyl-1~{H}-indol-3-yl]-1-oxidanylidene-1-sodiooxy-propan-2-yl]amino]-3-oxidanylidene-propyl]-7-oxidanylidene-heptanoyl]amino]-3-[2-(4-nitrophenyl)sulfanyl-1~{H}-indol-3-yl]propanoyl]oxysodium" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C63 H59 N11 O16 S3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-06-07 _chem_comp.pdbx_modified_date 2023-09-22 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 1322.402 _chem_comp.one_letter_code ? _chem_comp.three_letter_code XIO _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8P9Y _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal XIO C10 C1 C 0 1 N N S 244.905 181.644 255.538 -6.542 2.744 -1.161 C10 XIO 1 XIO C12 C2 C 0 1 Y N N 246.499 183.297 256.666 -8.459 2.051 0.252 C12 XIO 2 XIO C13 C3 C 0 1 Y N N 247.889 183.389 256.499 -9.415 1.064 -0.282 C13 XIO 3 XIO C16 C4 C 0 1 Y N N 250.610 185.266 256.101 -10.330 -1.694 -2.054 C16 XIO 4 XIO C18 C5 C 0 1 Y N N 252.939 185.389 255.519 -12.418 -2.820 -1.725 C18 XIO 5 XIO C22 C6 C 0 1 Y N N 252.767 184.349 254.619 -13.049 -1.607 -1.494 C22 XIO 6 XIO C23 C7 C 0 1 Y N N 251.514 183.767 254.458 -12.328 -0.434 -1.531 C23 XIO 7 XIO C25 C8 C 0 1 Y N N 247.446 183.536 258.659 -9.038 0.521 1.865 C25 XIO 8 XIO C26 C9 C 0 1 Y N N 246.225 183.390 258.034 -8.229 1.711 1.578 C26 XIO 9 XIO C28 C10 C 0 1 Y N N 245.089 183.793 260.140 -7.411 1.674 3.868 C28 XIO 10 XIO C29 C11 C 0 1 Y N N 246.326 183.941 260.776 -8.186 0.548 4.111 C29 XIO 11 XIO C17 C12 C 0 1 Y N N 251.865 185.847 256.260 -11.061 -2.860 -2.004 C17 XIO 12 XIO N19 N1 N 1 1 N N N 254.262 185.990 255.694 -13.197 -4.078 -1.672 N19 XIO 13 XIO O21 O1 O 0 1 N N N 254.388 186.940 256.380 -12.601 -5.231 -1.890 O21 XIO 14 XIO O20 O2 O -1 1 N N N 255.383 185.428 255.056 -14.487 -4.043 -1.407 O20 XIO 15 XIO C15 C13 C 0 1 Y N N 250.439 184.227 255.200 -10.959 -0.467 -1.817 C15 XIO 16 XIO S14 S1 S 0 1 N N N 248.767 183.533 254.912 -10.032 1.030 -1.879 S14 XIO 17 XIO N24 N2 N 0 1 Y N N 248.427 183.530 257.698 -9.726 0.180 0.713 N24 XIO 18 XIO C30 C14 C 0 1 Y N N 247.502 183.814 260.043 -8.986 -0.023 3.134 C30 XIO 19 XIO C27 C15 C 0 1 Y N N 245.034 183.519 258.776 -7.403 2.273 2.642 C27 XIO 20 XIO C11 C16 C 0 1 N N N 245.462 183.078 255.544 -7.844 3.203 -0.500 C11 XIO 21 XIO C31 C17 C 0 1 N N N 245.290 180.950 256.823 -5.991 3.859 -2.012 C31 XIO 22 XIO O34 O3 O 0 1 N N N 244.868 181.343 257.853 -4.896 4.312 -1.778 O34 XIO 23 XIO O32 O4 O 0 1 N N N 246.206 179.891 256.798 -6.717 4.349 -3.029 O32 XIO 24 XIO H40 H40 H 0 1 N Y N 246.383 179.604 257.686 -6.321 5.063 -3.547 H40 XIO 25 XIO N09 N3 N 0 1 N N N 243.442 181.684 255.423 -5.567 2.391 -0.126 N09 XIO 26 XIO C08 C18 C 0 1 N N N 242.600 180.894 256.358 -4.578 1.518 -0.402 C08 XIO 27 XIO O35 O5 O 0 1 N N N 243.100 180.351 257.288 -4.496 1.024 -1.507 O35 XIO 28 XIO C07 C19 C 0 1 N N N 241.060 180.730 256.083 -3.575 1.155 0.662 C07 XIO 29 XIO C06 C20 C 0 1 N N N 240.245 180.534 257.401 -2.568 0.153 0.093 C06 XIO 30 XIO C05 C21 C 0 1 N N N 238.700 180.366 257.133 -1.549 -0.215 1.174 C05 XIO 31 XIO C41 C22 C 0 1 N N N 238.483 179.406 255.929 -0.812 1.045 1.631 C41 XIO 32 XIO C42 C23 C 0 1 N N N 236.982 179.282 255.535 -0.087 1.673 0.438 C42 XIO 33 XIO C43 C24 C 0 1 N N N 236.606 177.844 255.091 0.639 2.914 0.889 C43 XIO 34 XIO O70 O6 O 0 1 N N N 237.436 176.992 255.076 0.582 3.263 2.049 O70 XIO 35 XIO N44 N4 N 0 1 N N N 235.238 177.555 254.603 1.352 3.637 0.002 N44 XIO 36 XIO C45 C25 C 0 1 N N S 234.670 176.212 254.767 2.058 4.844 0.440 C45 XIO 37 XIO C66 C26 C 0 1 N N N 234.260 175.669 253.412 1.111 6.016 0.415 C66 XIO 38 XIO O69 O7 O 0 1 N N N 233.576 176.315 252.699 -0.035 5.859 0.068 O69 XIO 39 XIO O67 O8 O 0 1 N N N 234.627 174.373 253.040 1.542 7.234 0.780 O67 XIO 40 XIO H59 H59 H 0 1 N Y N 234.247 174.166 252.194 0.898 7.955 0.748 H59 XIO 41 XIO C46 C27 C 0 1 N N N 233.443 176.287 255.678 3.233 5.117 -0.502 C46 XIO 42 XIO C47 C28 C 0 1 Y N N 233.157 174.948 256.383 4.240 4.002 -0.385 C47 XIO 43 XIO C61 C29 C 0 1 Y N N 234.064 174.228 257.194 5.311 3.943 0.495 C61 XIO 44 XIO C62 C30 C 0 1 Y N N 235.426 174.393 257.536 5.824 4.833 1.533 C62 XIO 45 XIO C63 C31 C 0 1 Y N N 236.025 173.527 258.447 6.932 4.458 2.233 C63 XIO 46 XIO C64 C32 C 0 1 Y N N 235.279 172.495 259.026 7.572 3.253 1.974 C64 XIO 47 XIO C65 C33 C 0 1 Y N N 233.941 172.332 258.690 7.125 2.375 1.000 C65 XIO 48 XIO C60 C34 C 0 1 Y N N 233.331 173.213 257.763 6.008 2.677 0.244 C60 XIO 49 XIO N59 N5 N 0 1 Y N N 232.038 173.309 257.319 5.342 2.013 -0.773 N59 XIO 50 XIO C48 C35 C 0 1 Y N N 231.910 174.336 256.496 4.272 2.761 -1.181 C48 XIO 51 XIO S49 S2 S 0 1 N N N 230.358 174.905 255.720 3.161 2.330 -2.410 S49 XIO 52 XIO C50 C36 C 0 1 Y N N 228.941 174.384 256.748 3.733 0.706 -2.784 C50 XIO 53 XIO C51 C37 C 0 1 Y N N 228.759 174.935 258.012 3.292 -0.386 -2.027 C51 XIO 54 XIO C52 C38 C 0 1 Y N N 227.697 174.516 258.805 3.743 -1.653 -2.325 C52 XIO 55 XIO C53 C39 C 0 1 Y N N 226.818 173.548 258.335 4.631 -1.848 -3.371 C53 XIO 56 XIO N54 N6 N 1 1 N N N 225.753 173.051 259.199 5.112 -3.213 -3.685 N54 XIO 57 XIO O56 O9 O 0 1 N N N 226.007 172.317 260.085 4.695 -4.238 -2.971 O56 XIO 58 XIO O55 O10 O -1 1 N N N 224.430 173.475 258.997 5.956 -3.401 -4.678 O55 XIO 59 XIO C57 C40 C 0 1 Y N N 226.997 172.999 257.075 5.072 -0.771 -4.125 C57 XIO 60 XIO C58 C41 C 0 1 Y N N 228.062 173.417 256.280 4.625 0.501 -3.842 C58 XIO 61 XIO N36 N7 N 0 1 N N N 238.118 181.660 256.831 -2.244 -0.816 2.315 N36 XIO 62 XIO C37 C42 C 0 1 N N N 238.971 182.822 256.687 -2.964 -1.943 2.149 C37 XIO 63 XIO O40 O11 O 0 1 N N N 240.133 182.724 256.855 -3.037 -2.460 1.054 O40 XIO 64 XIO C38 C43 C 0 1 N N N 238.361 184.183 256.386 -3.678 -2.560 3.323 C38 XIO 65 XIO N39 N8 N 0 1 N N N 239.231 184.947 255.515 -4.386 -3.770 2.884 N39 XIO 66 XIO C04 C44 C 0 1 N N N 238.014 179.772 258.397 -0.542 -1.217 0.605 C04 XIO 67 XIO C03 C45 C 0 1 N N N 237.889 180.808 259.540 0.400 -1.680 1.717 C03 XIO 68 XIO C02 C46 C 0 1 N N N 236.688 180.499 260.493 1.392 -2.667 1.157 C02 XIO 69 XIO O01 O12 O 0 1 N N N 235.617 180.943 260.256 1.349 -2.970 -0.016 O01 XIO 70 XIO N71 N9 N 0 1 N N N 236.885 179.625 261.664 2.327 -3.213 1.960 N71 XIO 71 XIO C72 C47 C 0 1 N N S 236.091 179.839 262.881 3.291 -4.172 1.416 C72 XIO 72 XIO C93 C48 C 0 1 N N N 236.155 178.601 263.749 2.685 -5.552 1.423 C93 XIO 73 XIO O96 O13 O 0 1 N N N 235.274 177.810 263.717 1.564 -5.717 1.841 O96 XIO 74 XIO O94 O14 O 0 1 N N N 237.260 178.388 264.582 3.392 -6.597 0.966 O94 XIO 75 XIO H58 H58 H 0 1 N Y N 237.150 177.570 265.052 2.962 -7.463 0.991 H58 XIO 76 XIO C73 C49 C 0 1 N N N 234.632 180.120 262.500 4.557 -4.166 2.274 C73 XIO 77 XIO C74 C50 C 0 1 Y N N 233.780 180.561 263.717 5.229 -2.821 2.168 C74 XIO 78 XIO C88 C51 C 0 1 Y N N 232.651 179.889 264.231 5.006 -1.718 2.981 C88 XIO 79 XIO C89 C52 C 0 1 Y N N 231.834 178.859 263.716 4.134 -1.457 4.123 C89 XIO 80 XIO C90 C53 C 0 1 Y N N 230.598 178.590 264.299 4.164 -0.224 4.706 C90 XIO 81 XIO C91 C54 C 0 1 Y N N 230.167 179.339 265.394 5.004 0.774 4.231 C91 XIO 82 XIO C92 C55 C 0 1 Y N N 230.968 180.350 265.902 5.849 0.576 3.150 C92 XIO 83 XIO C87 C56 C 0 1 Y N N 232.227 180.621 265.308 5.883 -0.643 2.502 C87 XIO 84 XIO N86 N10 N 0 1 Y N N 233.062 181.700 265.447 6.604 -1.126 1.423 N86 XIO 85 XIO C75 C57 C 0 1 Y N N 233.999 181.680 264.502 6.255 -2.426 1.186 C75 XIO 86 XIO S76 S3 S 0 1 N N N 235.186 183.009 264.153 6.897 -3.426 -0.047 S76 XIO 87 XIO C77 C58 C 0 1 Y N N 234.296 184.584 263.958 8.148 -2.361 -0.683 C77 XIO 88 XIO C78 C59 C 0 1 Y N N 233.740 184.920 262.729 9.466 -2.475 -0.228 C78 XIO 89 XIO C79 C60 C 0 1 Y N N 232.991 186.087 262.599 10.440 -1.639 -0.729 C79 XIO 90 XIO C80 C61 C 0 1 Y N N 232.798 186.915 263.698 10.116 -0.687 -1.684 C80 XIO 91 XIO N81 N11 N 1 1 N N N 231.980 188.114 263.572 11.168 0.207 -2.218 N81 XIO 92 XIO O83 O15 O 0 1 N N N 231.534 188.412 262.530 10.863 1.113 -3.125 O83 XIO 93 XIO O82 O16 O -1 1 N N N 231.707 188.900 264.706 12.407 0.098 -1.787 O82 XIO 94 XIO C84 C62 C 0 1 Y N N 233.355 186.580 264.929 8.812 -0.569 -2.140 C84 XIO 95 XIO C85 C63 C 0 1 Y N N 234.102 185.416 265.060 7.830 -1.402 -1.651 C85 XIO 96 XIO H1 H1 H 0 1 N N N 245.334 181.097 254.685 -6.740 1.874 -1.786 H1 XIO 97 XIO H2 H2 H 0 1 N N N 249.771 185.624 256.679 -9.272 -1.727 -2.272 H2 XIO 98 XIO H3 H3 H 0 1 N N N 253.607 183.990 254.042 -14.107 -1.583 -1.277 H3 XIO 99 XIO H4 H4 H 0 1 N N N 251.380 182.958 253.756 -12.821 0.510 -1.351 H4 XIO 100 XIO H5 H5 H 0 1 N N N 244.175 183.891 260.708 -6.804 2.082 4.662 H5 XIO 101 XIO H6 H6 H 0 1 N N N 246.368 184.153 261.834 -8.165 0.102 5.095 H6 XIO 102 XIO H7 H7 H 0 1 N N N 252.000 186.656 256.963 -10.576 -3.808 -2.183 H7 XIO 103 XIO H8 H8 H 0 1 N N N 249.406 183.619 257.879 -10.336 -0.570 0.626 H8 XIO 104 XIO H9 H9 H 0 1 N N N 248.458 183.928 260.532 -9.574 -0.899 3.367 H9 XIO 105 XIO H10 H10 H 0 1 N N N 244.078 183.405 258.286 -6.796 3.148 2.463 H10 XIO 106 XIO H11 H11 H 0 1 N N N 245.942 183.275 254.574 -7.632 4.017 0.193 H11 XIO 107 XIO H12 H12 H 0 1 N N N 244.629 183.781 255.690 -8.538 3.549 -1.265 H12 XIO 108 XIO H13 H13 H 0 1 N N N 243.012 182.244 254.715 -5.633 2.786 0.757 H13 XIO 109 XIO H14 H14 H 0 1 N N N 240.693 181.631 255.570 -3.050 2.053 0.988 H14 XIO 110 XIO H15 H15 H 0 1 N N N 240.907 179.853 255.437 -4.092 0.708 1.511 H15 XIO 111 XIO H16 H16 H 0 1 N N N 240.614 179.634 257.914 -3.093 -0.744 -0.232 H16 XIO 112 XIO H17 H17 H 0 1 N N N 240.398 181.412 258.045 -2.051 0.600 -0.756 H17 XIO 113 XIO H18 H18 H 0 1 N N N 238.861 178.409 256.199 -1.529 1.759 2.036 H18 XIO 114 XIO H19 H19 H 0 1 N N N 239.045 179.790 255.065 -0.086 0.783 2.401 H19 XIO 115 XIO H20 H20 H 0 1 N N N 236.776 179.974 254.705 0.631 0.959 0.033 H20 XIO 116 XIO H21 H21 H 0 1 N N N 236.365 179.557 256.403 -0.812 1.935 -0.331 H21 XIO 117 XIO H22 H22 H 0 1 N N N 234.702 178.275 254.162 1.398 3.358 -0.926 H22 XIO 118 XIO H23 H23 H 0 1 N N N 235.415 175.540 255.219 2.431 4.699 1.454 H23 XIO 119 XIO H24 H24 H 0 1 N N N 233.616 177.059 256.442 2.870 5.174 -1.528 H24 XIO 120 XIO H25 H25 H 0 1 N N N 232.568 176.561 255.071 3.704 6.062 -0.230 H25 XIO 121 XIO H26 H26 H 0 1 N N N 236.002 175.191 257.091 5.334 5.773 1.742 H26 XIO 122 XIO H27 H27 H 0 1 N N N 237.066 173.652 258.707 7.320 5.110 3.003 H27 XIO 123 XIO H28 H28 H 0 1 N N N 235.743 171.825 259.734 8.447 2.992 2.550 H28 XIO 124 XIO H29 H29 H 0 1 N N N 233.366 171.534 259.135 7.652 1.448 0.831 H29 XIO 125 XIO H30 H30 H 0 1 N N N 231.297 172.690 257.580 5.593 1.150 -1.137 H30 XIO 126 XIO H31 H31 H 0 1 N N N 229.442 175.688 258.377 2.600 -0.235 -1.212 H31 XIO 127 XIO H32 H32 H 0 1 N N N 227.555 174.943 259.787 3.403 -2.496 -1.742 H32 XIO 128 XIO H33 H33 H 0 1 N N N 226.312 172.248 256.710 5.764 -0.930 -4.938 H33 XIO 129 XIO H34 H34 H 0 1 N N N 228.204 172.988 255.299 4.965 1.338 -4.433 H34 XIO 130 XIO H35 H35 H 0 1 N N N 237.128 181.750 256.722 -2.185 -0.402 3.191 H35 XIO 131 XIO H36 H36 H 0 1 N N N 238.219 184.732 257.328 -2.953 -2.823 4.093 H36 XIO 132 XIO H37 H37 H 0 1 N N N 237.388 184.043 255.893 -4.396 -1.847 3.728 H37 XIO 133 XIO H38 H38 H 0 1 N N N 238.817 185.837 255.327 -4.874 -4.204 3.654 H38 XIO 134 XIO H39 H39 H 0 1 N N N 240.116 185.079 255.961 -5.019 -3.564 2.126 H39 XIO 135 XIO H41 H41 H 0 1 N N N 237.007 179.425 258.123 -1.075 -2.076 0.199 H41 XIO 136 XIO H42 H42 H 0 1 N N N 238.610 178.920 258.756 0.036 -0.741 -0.187 H42 XIO 137 XIO H43 H43 H 0 1 N N N 238.818 180.800 260.128 0.933 -0.820 2.124 H43 XIO 138 XIO H44 H44 H 0 1 N N N 237.743 181.805 259.099 -0.178 -2.156 2.509 H44 XIO 139 XIO H45 H45 H 0 1 N N N 237.559 178.887 261.630 2.361 -2.971 2.899 H45 XIO 140 XIO H46 H46 H 0 1 N N N 236.488 180.698 263.442 3.544 -3.892 0.393 H46 XIO 141 XIO H47 H47 H 0 1 N N N 234.611 180.920 261.745 4.292 -4.359 3.314 H47 XIO 142 XIO H48 H48 H 0 1 N N N 234.195 179.204 262.075 5.238 -4.941 1.923 H48 XIO 143 XIO H49 H49 H 0 1 N N N 232.168 178.279 262.869 3.477 -2.227 4.500 H49 XIO 144 XIO H50 H50 H 0 1 N N N 229.974 177.802 263.904 3.524 -0.021 5.551 H50 XIO 145 XIO H51 H51 H 0 1 N N N 229.209 179.131 265.846 4.999 1.738 4.719 H51 XIO 146 XIO H52 H52 H 0 1 N N N 230.634 180.931 266.749 6.486 1.380 2.813 H52 XIO 147 XIO H53 H53 H 0 1 N N N 232.979 182.400 266.156 7.258 -0.620 0.916 H53 XIO 148 XIO H54 H54 H 0 1 N N N 233.889 184.276 261.875 9.720 -3.216 0.516 H54 XIO 149 XIO H55 H55 H 0 1 N N N 232.560 186.348 261.644 11.458 -1.726 -0.379 H55 XIO 150 XIO H56 H56 H 0 1 N N N 233.206 187.225 265.782 8.567 0.175 -2.883 H56 XIO 151 XIO H57 H57 H 0 1 N N N 234.533 185.155 266.016 6.816 -1.312 -2.011 H57 XIO 152 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal XIO H59 O67 SING N N 1 XIO O69 C66 DOUB N N 2 XIO O67 C66 SING N N 3 XIO C66 C45 SING N N 4 XIO C23 C22 DOUB Y N 5 XIO C23 C15 SING Y N 6 XIO N44 C45 SING N N 7 XIO N44 C43 SING N N 8 XIO C22 C18 SING Y N 9 XIO C45 C46 SING N N 10 XIO S14 C15 SING N N 11 XIO S14 C13 SING N N 12 XIO O20 N19 SING N N 13 XIO O70 C43 DOUB N N 14 XIO C43 C42 SING N N 15 XIO C15 C16 DOUB Y N 16 XIO N09 C10 SING N N 17 XIO N09 C08 SING N N 18 XIO N39 C38 SING N N 19 XIO C18 N19 SING N N 20 XIO C18 C17 DOUB Y N 21 XIO C42 C41 SING N N 22 XIO C10 C11 SING N N 23 XIO C10 C31 SING N N 24 XIO C11 C12 SING N N 25 XIO C46 C47 SING N N 26 XIO N19 O21 DOUB N N 27 XIO S49 C48 SING N N 28 XIO S49 C50 SING N N 29 XIO C41 C05 SING N N 30 XIO C07 C08 SING N N 31 XIO C07 C06 SING N N 32 XIO C16 C17 SING Y N 33 XIO C58 C50 DOUB Y N 34 XIO C58 C57 SING Y N 35 XIO C08 O35 DOUB N N 36 XIO C47 C48 DOUB Y N 37 XIO C47 C61 SING Y N 38 XIO C38 C37 SING N N 39 XIO C48 N59 SING Y N 40 XIO C13 C12 DOUB Y N 41 XIO C13 N24 SING Y N 42 XIO C12 C26 SING Y N 43 XIO C37 N36 SING N N 44 XIO C37 O40 DOUB N N 45 XIO C50 C51 SING Y N 46 XIO H40 O32 SING N N 47 XIO O32 C31 SING N N 48 XIO C31 O34 DOUB N N 49 XIO N36 C05 SING N N 50 XIO C57 C53 DOUB Y N 51 XIO C05 C06 SING N N 52 XIO C05 C04 SING N N 53 XIO C61 C62 DOUB Y N 54 XIO C61 C60 SING Y N 55 XIO N59 C60 SING Y N 56 XIO C62 C63 SING Y N 57 XIO N24 C25 SING Y N 58 XIO C60 C65 DOUB Y N 59 XIO C51 C52 DOUB Y N 60 XIO C26 C25 DOUB Y N 61 XIO C26 C27 SING Y N 62 XIO C53 C52 SING Y N 63 XIO C53 N54 SING N N 64 XIO C04 C03 SING N N 65 XIO C63 C64 DOUB Y N 66 XIO C25 C30 SING Y N 67 XIO C65 C64 SING Y N 68 XIO C27 C28 DOUB Y N 69 XIO O55 N54 SING N N 70 XIO N54 O56 DOUB N N 71 XIO C03 C02 SING N N 72 XIO C30 C29 DOUB Y N 73 XIO C28 C29 SING Y N 74 XIO O01 C02 DOUB N N 75 XIO C02 N71 SING N N 76 XIO N71 C72 SING N N 77 XIO C73 C72 SING N N 78 XIO C73 C74 SING N N 79 XIO O83 N81 DOUB N N 80 XIO C79 C78 DOUB Y N 81 XIO C79 C80 SING Y N 82 XIO C78 C77 SING Y N 83 XIO C72 C93 SING N N 84 XIO N81 C80 SING N N 85 XIO N81 O82 SING N N 86 XIO C80 C84 DOUB Y N 87 XIO C89 C88 DOUB Y N 88 XIO C89 C90 SING Y N 89 XIO O96 C93 DOUB N N 90 XIO C74 C88 SING Y N 91 XIO C74 C75 DOUB Y N 92 XIO C93 O94 SING N N 93 XIO C77 S76 SING N N 94 XIO C77 C85 DOUB Y N 95 XIO S76 C75 SING N N 96 XIO C88 C87 SING Y N 97 XIO C90 C91 DOUB Y N 98 XIO C75 N86 SING Y N 99 XIO O94 H58 SING N N 100 XIO C84 C85 SING Y N 101 XIO C87 N86 SING Y N 102 XIO C87 C92 DOUB Y N 103 XIO C91 C92 SING Y N 104 XIO C10 H1 SING N N 105 XIO C16 H2 SING N N 106 XIO C22 H3 SING N N 107 XIO C23 H4 SING N N 108 XIO C28 H5 SING N N 109 XIO C29 H6 SING N N 110 XIO C17 H7 SING N N 111 XIO N24 H8 SING N N 112 XIO C30 H9 SING N N 113 XIO C27 H10 SING N N 114 XIO C11 H11 SING N N 115 XIO C11 H12 SING N N 116 XIO N09 H13 SING N N 117 XIO C07 H14 SING N N 118 XIO C07 H15 SING N N 119 XIO C06 H16 SING N N 120 XIO C06 H17 SING N N 121 XIO C41 H18 SING N N 122 XIO C41 H19 SING N N 123 XIO C42 H20 SING N N 124 XIO C42 H21 SING N N 125 XIO N44 H22 SING N N 126 XIO C45 H23 SING N N 127 XIO C46 H24 SING N N 128 XIO C46 H25 SING N N 129 XIO C62 H26 SING N N 130 XIO C63 H27 SING N N 131 XIO C64 H28 SING N N 132 XIO C65 H29 SING N N 133 XIO N59 H30 SING N N 134 XIO C51 H31 SING N N 135 XIO C52 H32 SING N N 136 XIO C57 H33 SING N N 137 XIO C58 H34 SING N N 138 XIO N36 H35 SING N N 139 XIO C38 H36 SING N N 140 XIO C38 H37 SING N N 141 XIO N39 H38 SING N N 142 XIO N39 H39 SING N N 143 XIO C04 H41 SING N N 144 XIO C04 H42 SING N N 145 XIO C03 H43 SING N N 146 XIO C03 H44 SING N N 147 XIO N71 H45 SING N N 148 XIO C72 H46 SING N N 149 XIO C73 H47 SING N N 150 XIO C73 H48 SING N N 151 XIO C89 H49 SING N N 152 XIO C90 H50 SING N N 153 XIO C91 H51 SING N N 154 XIO C92 H52 SING N N 155 XIO N86 H53 SING N N 156 XIO C78 H54 SING N N 157 XIO C79 H55 SING N N 158 XIO C84 H56 SING N N 159 XIO C85 H57 SING N N 160 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor XIO InChI InChI 1.06 "InChI=1S/C63H59N11O16S3/c64-34-56(78)71-63(28-25-53(75)65-50(60(79)80)31-44-41-7-1-4-10-47(41)68-57(44)91-38-19-13-35(14-20-38)72(85)86,29-26-54(76)66-51(61(81)82)32-45-42-8-2-5-11-48(42)69-58(45)92-39-21-15-36(16-22-39)73(87)88)30-27-55(77)67-52(62(83)84)33-46-43-9-3-6-12-49(43)70-59(46)93-40-23-17-37(18-24-40)74(89)90/h1-24,50-52,68-70H,25-34,64H2,(H,65,75)(H,66,76)(H,67,77)(H,71,78)(H,79,80)(H,81,82)(H,83,84)/t50-,51-,52-/m0/s1" XIO InChIKey InChI 1.06 OJDYQRNEDPEFMJ-VPMCDZTMSA-N XIO SMILES_CANONICAL CACTVS 3.385 "NCC(=O)N[C@](CCC(=O)N[C@@H](Cc1c([nH]c2ccccc12)Sc3ccc(cc3)[N+]([O-])=O)C(O)=O)(CCC(=O)N[C@@H](Cc4c([nH]c5ccccc45)Sc6ccc(cc6)[N+]([O-])=O)C(O)=O)CCC(=O)N[C@@H](Cc7c([nH]c8ccccc78)Sc9ccc(cc9)[N+]([O-])=O)C(O)=O" XIO SMILES CACTVS 3.385 "NCC(=O)N[C](CCC(=O)N[CH](Cc1c([nH]c2ccccc12)Sc3ccc(cc3)[N+]([O-])=O)C(O)=O)(CCC(=O)N[CH](Cc4c([nH]c5ccccc45)Sc6ccc(cc6)[N+]([O-])=O)C(O)=O)CCC(=O)N[CH](Cc7c([nH]c8ccccc78)Sc9ccc(cc9)[N+]([O-])=O)C(O)=O" XIO SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc2c(c1)c(c([nH]2)Sc3ccc(cc3)[N+](=O)[O-])C[C@@H](C(=O)O)NC(=O)CCC(CCC(=O)N[C@@H](Cc4c5ccccc5[nH]c4Sc6ccc(cc6)[N+](=O)[O-])C(=O)O)(CCC(=O)N[C@@H](Cc7c8ccccc8[nH]c7Sc9ccc(cc9)[N+](=O)[O-])C(=O)O)NC(=O)CN" XIO SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc2c(c1)c(c([nH]2)Sc3ccc(cc3)[N+](=O)[O-])CC(C(=O)O)NC(=O)CCC(CCC(=O)NC(Cc4c5ccccc5[nH]c4Sc6ccc(cc6)[N+](=O)[O-])C(=O)O)(CCC(=O)NC(Cc7c8ccccc8[nH]c7Sc9ccc(cc9)[N+](=O)[O-])C(=O)O)NC(=O)CN" # _pdbx_chem_comp_identifier.comp_id XIO _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{S})-2-[[4-(2-azanylethanoylamino)-7-[[(2~{S})-3-[2-(4-nitrophenyl)sulfanyl-1~{H}-indol-3-yl]-1-oxidanyl-1-oxidanylidene-propan-2-yl]amino]-4-[3-[[(2~{S})-3-[2-(4-nitrophenyl)sulfanyl-1~{H}-indol-3-yl]-1-oxidanyl-1-oxidanylidene-propan-2-yl]amino]-3-oxidanylidene-propyl]-7-oxidanylidene-heptanoyl]amino]-3-[2-(4-nitrophenyl)sulfanyl-1~{H}-indol-3-yl]propanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site XIO "Create component" 2023-06-07 PDBE XIO "Modify coordinates" 2023-06-21 PDBE XIO "Initial release" 2023-09-27 RCSB #