data_XIY # _chem_comp.id XIY _chem_comp.name 2-HYDROXYMETHYL-BENZOIMIDAZOLE _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C8 H8 N2 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms 1H-BENZIMIDAZOL-2-YLMETHANOL _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2010-07-01 _chem_comp.pdbx_modified_date 2021-03-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 148.162 _chem_comp.one_letter_code ? _chem_comp.three_letter_code XIY _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 2XIY _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal XIY NG NG N 0 1 Y N N -21.966 -35.290 -1.591 -0.548 1.305 -0.001 NG XIY 1 XIY CD1 CD1 C 0 1 Y N N -21.756 -34.165 -0.895 -1.440 0.358 -0.000 CD1 XIY 2 XIY NE1 NE1 N 0 1 Y N N -22.072 -34.372 0.394 -0.831 -0.858 -0.000 NE1 XIY 3 XIY CE2 CE2 C 0 1 Y N N -22.483 -35.638 0.519 0.532 -0.635 -0.001 CE2 XIY 4 XIY CZ2 CZ2 C 0 1 Y N N -22.925 -36.378 1.613 1.647 -1.461 -0.000 CZ2 XIY 5 XIY CH2 CH2 C 0 1 Y N N -23.299 -37.718 1.443 2.909 -0.905 0.000 CH2 XIY 6 XIY CZ3 CZ3 C 0 1 Y N N -23.227 -38.301 0.174 3.070 0.473 0.001 CZ3 XIY 7 XIY CE3 CE3 C 0 1 Y N N -22.781 -37.549 -0.924 1.984 1.302 0.001 CE3 XIY 8 XIY CD2 CD2 C 0 1 Y N N -22.406 -36.221 -0.748 0.696 0.761 -0.001 CD2 XIY 9 XIY C C C 0 1 N N N -21.243 -32.841 -1.461 -2.931 0.576 0.000 C XIY 10 XIY O O O 0 1 N N N -20.996 -31.920 -0.398 -3.598 -0.688 0.001 O XIY 11 XIY HE1 HE1 H 0 1 N N N -22.011 -33.698 1.130 -1.271 -1.722 -0.000 HE1 XIY 12 XIY HC1 HC1 H 0 1 N N N -20.308 -33.019 -2.013 -3.216 1.137 0.890 HC1 XIY 13 XIY HC2 HC2 H 0 1 N N N -22.001 -32.419 -2.137 -3.217 1.137 -0.890 HC2 XIY 14 XIY HZ2 HZ2 H 0 1 N N N -22.979 -35.920 2.590 1.527 -2.534 0.000 HZ2 XIY 15 XIY HH2 HH2 H 0 1 N N N -23.641 -38.297 2.288 3.778 -1.546 0.000 HH2 XIY 16 XIY HZ3 HZ3 H 0 1 N N N -23.515 -39.333 0.038 4.064 0.895 0.001 HZ3 XIY 17 XIY HE3 HE3 H 0 1 N N N -22.729 -38.001 -1.904 2.121 2.373 0.002 HE3 XIY 18 XIY H H H 0 1 N N N -20.941 -32.392 0.424 -4.562 -0.624 0.001 H XIY 19 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal XIY NG CD1 DOUB Y N 1 XIY NG CD2 SING Y N 2 XIY CD1 NE1 SING Y N 3 XIY CD1 C SING N N 4 XIY NE1 CE2 SING Y N 5 XIY CE2 CZ2 DOUB Y N 6 XIY CE2 CD2 SING Y N 7 XIY CZ2 CH2 SING Y N 8 XIY CH2 CZ3 DOUB Y N 9 XIY CZ3 CE3 SING Y N 10 XIY CE3 CD2 DOUB Y N 11 XIY C O SING N N 12 XIY NE1 HE1 SING N N 13 XIY C HC1 SING N N 14 XIY C HC2 SING N N 15 XIY CZ2 HZ2 SING N N 16 XIY CH2 HH2 SING N N 17 XIY CZ3 HZ3 SING N N 18 XIY CE3 HE3 SING N N 19 XIY O H SING N N 20 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor XIY SMILES ACDLabs 10.04 OCc2nc1ccccc1n2 XIY SMILES_CANONICAL CACTVS 3.352 OCc1[nH]c2ccccc2n1 XIY SMILES CACTVS 3.352 OCc1[nH]c2ccccc2n1 XIY SMILES_CANONICAL "OpenEye OEToolkits" 1.6.1 "c1ccc2c(c1)[nH]c(n2)CO" XIY SMILES "OpenEye OEToolkits" 1.6.1 "c1ccc2c(c1)[nH]c(n2)CO" XIY InChI InChI 1.03 "InChI=1S/C8H8N2O/c11-5-8-9-6-3-1-2-4-7(6)10-8/h1-4,11H,5H2,(H,9,10)" XIY InChIKey InChI 1.03 IAJLTMBBAVVMQO-UHFFFAOYSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier XIY "SYSTEMATIC NAME" ACDLabs 10.04 1H-benzimidazol-2-ylmethanol XIY "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.6.1 1H-benzimidazol-2-ylmethanol # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site XIY "Create component" 2010-07-01 EBI XIY "Modify aromatic_flag" 2011-06-04 RCSB XIY "Modify descriptor" 2011-06-04 RCSB XIY "Modify synonyms" 2021-03-01 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id XIY _pdbx_chem_comp_synonyms.name 1H-BENZIMIDAZOL-2-YLMETHANOL _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##