data_XJ4 # _chem_comp.id XJ4 _chem_comp.name "N'-[[3-[4-(3,5-dimethyl-1,2-oxazol-4-yl)-5-methyl-6-phenylazanyl-pyrimidin-2-yl]phenyl]methyl]-N-methyl-ethane-1,2-diamine" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C26 H30 N6 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2019-01-10 _chem_comp.pdbx_modified_date 2021-11-19 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 442.556 _chem_comp.one_letter_code ? _chem_comp.three_letter_code XJ4 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6J01 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal XJ4 C1 C1 C 0 1 N N N 15.649 17.485 284.758 8.760 0.489 -2.382 C1 XJ4 1 XJ4 C3 C2 C 0 1 N N N 14.899 19.542 283.802 6.671 1.022 -1.281 C3 XJ4 2 XJ4 C4 C3 C 0 1 N N N 15.300 20.710 282.903 5.971 1.092 0.078 C4 XJ4 3 XJ4 C6 C4 C 0 1 N N N 14.502 22.494 284.262 3.881 1.625 1.179 C6 XJ4 4 XJ4 C7 C5 C 0 1 Y N N 13.520 23.665 284.336 2.467 2.093 0.949 C7 XJ4 5 XJ4 C8 C6 C 0 1 Y N N 12.251 23.456 284.850 1.466 1.172 0.719 C8 XJ4 6 XJ4 C9 C7 C 0 1 Y N N 11.350 24.505 284.908 0.158 1.607 0.507 C9 XJ4 7 XJ4 C10 C8 C 0 1 Y N N 9.974 24.221 285.504 -0.923 0.622 0.259 C10 XJ4 8 XJ4 C12 C9 C 0 1 Y N N 7.704 24.509 285.511 -1.569 -1.584 0.031 C12 XJ4 9 XJ4 C14 C10 C 0 1 Y N N 6.424 26.208 284.087 0.040 -3.350 0.358 C14 XJ4 10 XJ4 C15 C11 C 0 1 Y N N 7.406 27.191 284.125 0.769 -2.649 1.310 C15 XJ4 11 XJ4 C16 C12 C 0 1 Y N N 7.337 28.270 283.255 2.043 -3.063 1.646 C16 XJ4 12 XJ4 C17 C13 C 0 1 Y N N 6.273 28.362 282.358 2.593 -4.174 1.035 C17 XJ4 13 XJ4 C18 C14 C 0 1 Y N N 5.286 27.385 282.329 1.871 -4.875 0.086 C18 XJ4 14 XJ4 C19 C15 C 0 1 Y N N 5.358 26.307 283.198 0.594 -4.470 -0.249 C19 XJ4 15 XJ4 C20 C16 C 0 1 Y N N 7.624 23.664 286.602 -2.881 -1.167 -0.189 C20 XJ4 16 XJ4 C21 C17 C 0 1 N N N 6.243 23.387 287.178 -3.978 -2.169 -0.440 C21 XJ4 17 XJ4 C22 C18 C 0 1 Y N N 8.791 23.109 287.131 -3.154 0.201 -0.165 C22 XJ4 18 XJ4 C23 C19 C 0 1 Y N N 8.847 22.161 288.333 -4.533 0.695 -0.393 C23 XJ4 19 XJ4 C24 C20 C 0 1 Y N N 8.572 22.470 289.649 -5.347 1.362 0.481 C24 XJ4 20 XJ4 C25 C21 C 0 1 N N N 8.101 23.816 290.187 -5.023 1.753 1.900 C25 XJ4 21 XJ4 C28 C22 C 0 1 Y N N 9.239 20.813 288.288 -5.320 0.595 -1.575 C28 XJ4 22 XJ4 C29 C23 C 0 1 N N N 9.640 20.030 287.044 -4.919 -0.049 -2.877 C29 XJ4 23 XJ4 C31 C24 C 0 1 Y N N 11.692 25.772 284.462 -0.129 2.970 0.528 C31 XJ4 24 XJ4 C32 C25 C 0 1 Y N N 12.964 25.980 283.942 0.881 3.882 0.759 C32 XJ4 25 XJ4 C33 C26 C 0 1 Y N N 13.873 24.926 283.881 2.175 3.445 0.975 C33 XJ4 26 XJ4 N2 N1 N 0 1 N N N 15.942 18.525 283.782 8.056 0.568 -1.096 N2 XJ4 27 XJ4 N5 N2 N 0 1 N N N 14.334 21.794 282.998 4.586 1.546 -0.108 N5 XJ4 28 XJ4 N11 N3 N 0 1 Y N N 8.893 24.764 284.988 -0.627 -0.671 0.249 N11 XJ4 29 XJ4 N13 N4 N 0 1 N N N 6.470 25.072 284.988 -1.250 -2.934 0.017 N13 XJ4 30 XJ4 N27 N5 N 0 1 Y N N 9.169 20.340 289.545 -6.455 1.168 -1.306 N27 XJ4 31 XJ4 N30 N6 N 0 1 Y N N 9.939 23.411 286.544 -2.158 1.056 0.060 N30 XJ4 32 XJ4 O26 O1 O 0 1 Y N N 8.768 21.371 290.353 -6.489 1.597 -0.176 O26 XJ4 33 XJ4 H1 H1 H 0 1 N N N 16.443 16.724 284.733 8.246 -0.215 -3.036 H1 XJ4 34 XJ4 H2 H2 H 0 1 N N N 15.598 17.929 285.763 8.775 1.474 -2.849 H2 XJ4 35 XJ4 H3 H3 H 0 1 N N N 14.684 17.016 284.515 9.783 0.151 -2.216 H3 XJ4 36 XJ4 H4 H4 H 0 1 N N N 14.761 19.904 284.832 6.142 0.321 -1.927 H4 XJ4 37 XJ4 H5 H5 H 0 1 N N N 13.957 19.107 283.437 6.671 2.011 -1.741 H5 XJ4 38 XJ4 H6 H6 H 0 1 N N N 15.349 20.362 281.861 5.970 0.104 0.537 H6 XJ4 39 XJ4 H7 H7 H 0 1 N N N 16.288 21.080 283.213 6.500 1.793 0.723 H7 XJ4 40 XJ4 H8 H8 H 0 1 N N N 14.307 21.800 285.093 4.396 2.330 1.832 H8 XJ4 41 XJ4 H9 H9 H 0 1 N N N 15.531 22.875 284.335 3.866 0.640 1.646 H9 XJ4 42 XJ4 H10 H10 H 0 1 N N N 11.965 22.477 285.205 1.694 0.117 0.703 H10 XJ4 43 XJ4 H11 H11 H 0 1 N N N 8.221 27.115 284.830 0.340 -1.780 1.788 H11 XJ4 44 XJ4 H12 H12 H 0 1 N N N 8.101 29.033 283.272 2.610 -2.518 2.386 H12 XJ4 45 XJ4 H13 H13 H 0 1 N N N 6.216 29.201 281.680 3.590 -4.496 1.298 H13 XJ4 46 XJ4 H14 H14 H 0 1 N N N 4.465 27.465 281.632 2.304 -5.742 -0.390 H14 XJ4 47 XJ4 H15 H15 H 0 1 N N N 4.590 25.548 283.185 0.030 -5.017 -0.990 H15 XJ4 48 XJ4 H16 H16 H 0 1 N N N 5.808 22.507 286.682 -4.425 -2.463 0.510 H16 XJ4 49 XJ4 H17 H17 H 0 1 N N N 6.328 23.195 288.258 -4.740 -1.721 -1.077 H17 XJ4 50 XJ4 H18 H18 H 0 1 N N N 5.594 24.260 287.011 -3.562 -3.047 -0.933 H18 XJ4 51 XJ4 H19 H19 H 0 1 N N N 7.943 23.742 291.273 -4.569 2.743 1.910 H19 XJ4 52 XJ4 H20 H20 H 0 1 N N N 8.863 24.581 289.979 -5.939 1.767 2.491 H20 XJ4 53 XJ4 H21 H21 H 0 1 N N N 7.157 24.096 289.697 -4.327 1.030 2.327 H21 XJ4 54 XJ4 H22 H22 H 0 1 N N N 9.872 18.992 287.323 -5.103 -1.122 -2.824 H22 XJ4 55 XJ4 H23 H23 H 0 1 N N N 8.810 20.039 286.322 -5.504 0.381 -3.690 H23 XJ4 56 XJ4 H24 H24 H 0 1 N N N 10.527 20.494 286.589 -3.859 0.130 -3.059 H24 XJ4 57 XJ4 H25 H25 H 0 1 N N N 10.982 26.584 284.518 -1.140 3.312 0.364 H25 XJ4 58 XJ4 H26 H26 H 0 1 N N N 13.248 26.959 283.585 0.659 4.939 0.776 H26 XJ4 59 XJ4 H27 H27 H 0 1 N N N 14.860 25.093 283.476 2.962 4.162 1.155 H27 XJ4 60 XJ4 H28 H28 H 0 1 N N N 15.989 18.118 282.870 8.549 1.166 -0.449 H28 XJ4 61 XJ4 H30 H30 H 0 1 N N N 14.477 22.434 282.243 4.557 2.431 -0.591 H30 XJ4 62 XJ4 H32 H32 H 0 1 N N N 5.605 24.653 285.265 -1.921 -3.589 -0.229 H32 XJ4 63 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal XJ4 C18 C17 DOUB Y N 1 XJ4 C18 C19 SING Y N 2 XJ4 C17 C16 SING Y N 3 XJ4 C4 N5 SING N N 4 XJ4 C4 C3 SING N N 5 XJ4 N5 C6 SING N N 6 XJ4 C19 C14 DOUB Y N 7 XJ4 C16 C15 DOUB Y N 8 XJ4 N2 C3 SING N N 9 XJ4 N2 C1 SING N N 10 XJ4 C33 C32 DOUB Y N 11 XJ4 C33 C7 SING Y N 12 XJ4 C32 C31 SING Y N 13 XJ4 C14 C15 SING Y N 14 XJ4 C14 N13 SING N N 15 XJ4 C6 C7 SING N N 16 XJ4 C7 C8 DOUB Y N 17 XJ4 C31 C9 DOUB Y N 18 XJ4 C8 C9 SING Y N 19 XJ4 C9 C10 SING N N 20 XJ4 N13 C12 SING N N 21 XJ4 N11 C10 DOUB Y N 22 XJ4 N11 C12 SING Y N 23 XJ4 C10 N30 SING Y N 24 XJ4 C12 C20 DOUB Y N 25 XJ4 N30 C22 DOUB Y N 26 XJ4 C20 C22 SING Y N 27 XJ4 C20 C21 SING N N 28 XJ4 C29 C28 SING N N 29 XJ4 C22 C23 SING N N 30 XJ4 C28 C23 SING Y N 31 XJ4 C28 N27 DOUB Y N 32 XJ4 C23 C24 DOUB Y N 33 XJ4 N27 O26 SING Y N 34 XJ4 C24 C25 SING N N 35 XJ4 C24 O26 SING Y N 36 XJ4 C1 H1 SING N N 37 XJ4 C1 H2 SING N N 38 XJ4 C1 H3 SING N N 39 XJ4 C3 H4 SING N N 40 XJ4 C3 H5 SING N N 41 XJ4 C4 H6 SING N N 42 XJ4 C4 H7 SING N N 43 XJ4 C6 H8 SING N N 44 XJ4 C6 H9 SING N N 45 XJ4 C8 H10 SING N N 46 XJ4 C15 H11 SING N N 47 XJ4 C16 H12 SING N N 48 XJ4 C17 H13 SING N N 49 XJ4 C18 H14 SING N N 50 XJ4 C19 H15 SING N N 51 XJ4 C21 H16 SING N N 52 XJ4 C21 H17 SING N N 53 XJ4 C21 H18 SING N N 54 XJ4 C25 H19 SING N N 55 XJ4 C25 H20 SING N N 56 XJ4 C25 H21 SING N N 57 XJ4 C29 H22 SING N N 58 XJ4 C29 H23 SING N N 59 XJ4 C29 H24 SING N N 60 XJ4 C31 H25 SING N N 61 XJ4 C32 H26 SING N N 62 XJ4 C33 H27 SING N N 63 XJ4 N2 H28 SING N N 64 XJ4 N5 H30 SING N N 65 XJ4 N13 H32 SING N N 66 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor XJ4 InChI InChI 1.03 "InChI=1S/C26H30N6O/c1-17-24(23-18(2)32-33-19(23)3)30-26(31-25(17)29-22-11-6-5-7-12-22)21-10-8-9-20(15-21)16-28-14-13-27-4/h5-12,15,27-28H,13-14,16H2,1-4H3,(H,29,30,31)" XJ4 InChIKey InChI 1.03 DVIUIRPCVXVFSX-UHFFFAOYSA-N XJ4 SMILES_CANONICAL CACTVS 3.385 "CNCCNCc1cccc(c1)c2nc(Nc3ccccc3)c(C)c(n2)c4c(C)onc4C" XJ4 SMILES CACTVS 3.385 "CNCCNCc1cccc(c1)c2nc(Nc3ccccc3)c(C)c(n2)c4c(C)onc4C" XJ4 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "Cc1c(nc(nc1Nc2ccccc2)c3cccc(c3)CNCCNC)c4c(noc4C)C" XJ4 SMILES "OpenEye OEToolkits" 2.0.6 "Cc1c(nc(nc1Nc2ccccc2)c3cccc(c3)CNCCNC)c4c(noc4C)C" # _pdbx_chem_comp_identifier.comp_id XJ4 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.6 _pdbx_chem_comp_identifier.identifier "~{N}'-[[3-[4-(3,5-dimethyl-1,2-oxazol-4-yl)-5-methyl-6-phenylazanyl-pyrimidin-2-yl]phenyl]methyl]-~{N}-methyl-ethane-1,2-diamine" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site XJ4 "Create component" 2019-01-10 PDBJ XJ4 "Initial release" 2021-11-24 RCSB ##