data_XJ7 # _chem_comp.id XJ7 _chem_comp.name "(2S)-1-(butanoyloxy)-3-{[(R)-hydroxy{[(1r,2R,3S,4S,5R,6S)-2,3,4,5,6-pentahydroxycyclohexyl]oxy}phosphoryl]oxy}propan-2-yl tridecanoate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C26 H49 O13 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-12-17 _chem_comp.pdbx_modified_date 2021-09-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 600.633 _chem_comp.one_letter_code ? _chem_comp.three_letter_code XJ7 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7L2H _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal XJ7 C10 C1 C 0 1 N N N 110.841 142.598 121.311 -4.138 -2.473 4.632 C10 XJ7 1 XJ7 O11 O1 O 0 1 N N N 108.798 140.433 129.736 -6.860 -0.526 0.185 O11 XJ7 2 XJ7 C16 C2 C 0 1 N N N 110.751 137.681 119.489 7.567 0.579 -0.054 C16 XJ7 3 XJ7 C17 C3 C 0 1 N N N 110.729 138.843 118.496 8.998 0.042 -0.132 C17 XJ7 4 XJ7 C19 C4 C 0 1 N N N 110.147 139.568 116.111 11.405 0.588 0.252 C19 XJ7 5 XJ7 C20 C5 C 0 1 N N N 109.859 138.998 114.724 12.382 1.671 0.714 C20 XJ7 6 XJ7 C21 C6 C 0 1 N N N 109.583 140.077 113.684 13.813 1.134 0.636 C21 XJ7 7 XJ7 C23 C7 C 0 1 N N N 109.082 140.559 111.240 16.221 1.680 1.020 C23 XJ7 8 XJ7 C25 C8 C 0 1 N N S 108.290 140.255 132.023 -7.691 1.716 0.531 C25 XJ7 9 XJ7 C1 C9 C 0 1 N N R 105.961 139.258 132.616 -6.240 3.651 -0.094 C1 XJ7 10 XJ7 C C10 C 0 1 N N N 107.238 139.964 133.099 -7.270 3.137 0.913 C XJ7 11 XJ7 O O2 O 0 1 N N N 106.877 141.192 133.658 -6.693 3.127 2.221 O XJ7 12 XJ7 C11 C11 C 0 1 N N N 106.473 136.521 123.389 1.789 -1.580 -1.277 C11 XJ7 13 XJ7 C12 C12 C 0 1 N N N 107.503 135.624 122.720 2.752 -0.513 -0.822 C12 XJ7 14 XJ7 C13 C13 C 0 1 N N N 107.739 135.995 121.259 4.182 -1.050 -0.900 C13 XJ7 15 XJ7 C14 C14 C 0 1 N N N 109.212 136.233 120.931 5.159 0.033 -0.438 C14 XJ7 16 XJ7 C15 C15 C 0 1 N N N 109.380 137.031 119.646 6.590 -0.504 -0.516 C15 XJ7 17 XJ7 C18 C16 C 0 1 N N N 110.101 138.465 117.161 9.975 1.125 0.330 C18 XJ7 18 XJ7 C2 C17 C 0 1 N N S 105.530 139.635 131.204 -5.014 2.735 -0.084 C2 XJ7 19 XJ7 C22 C18 C 0 1 N N N 109.283 139.490 112.310 14.790 2.217 1.098 C22 XJ7 20 XJ7 C24 C19 C 0 1 N N R 107.730 140.501 130.628 -6.466 0.800 0.542 C24 XJ7 21 XJ7 C3 C20 C 0 1 N N N 106.692 139.455 130.244 -5.436 1.315 -0.466 C3 XJ7 22 XJ7 C4 C21 C 0 1 N N N 107.558 138.093 126.551 -1.646 -1.811 -2.398 C4 XJ7 23 XJ7 C5 C22 C 0 1 N N S 107.800 137.337 125.244 -0.398 -2.405 -1.743 C5 XJ7 24 XJ7 C6 C23 C 0 1 N N N 109.089 137.895 124.665 -0.809 -3.264 -0.546 C6 XJ7 25 XJ7 C7 C24 C 0 1 N N N 110.041 139.866 123.927 -2.063 -3.082 1.472 C7 XJ7 26 XJ7 C8 C25 C 0 1 N N N 109.818 140.771 122.732 -2.909 -2.323 2.463 C8 XJ7 27 XJ7 C9 C26 C 0 1 N N N 111.065 141.583 122.425 -3.280 -3.243 3.627 C9 XJ7 28 XJ7 O1 O3 O 0 1 N N N 104.917 139.630 133.474 -5.846 4.978 0.262 O1 XJ7 29 XJ7 O10 O4 O 0 1 N N N 105.352 136.353 123.076 2.205 -2.659 -1.628 O10 XJ7 30 XJ7 O12 O5 O 0 1 N N N 108.954 141.420 132.428 -8.653 1.236 1.472 O12 XJ7 31 XJ7 O2 O6 O 0 1 N N N 104.463 138.821 130.821 -4.052 3.216 -1.025 O2 XJ7 32 XJ7 O3 O7 O 0 1 N N N 106.274 139.663 128.919 -4.292 0.459 -0.456 O3 XJ7 33 XJ7 O4 O8 O 0 1 N N N 104.719 137.696 129.106 -4.897 -1.424 -2.189 O4 XJ7 34 XJ7 O5 O9 O 0 1 N N N 104.497 139.129 127.170 -3.566 0.610 -2.869 O5 XJ7 35 XJ7 O6 O10 O 0 1 N N N 106.502 137.539 127.270 -2.404 -1.098 -1.418 O6 XJ7 36 XJ7 O7 O11 O 0 1 N N N 108.974 139.278 124.595 -1.618 -2.472 0.363 O7 XJ7 37 XJ7 O8 O12 O 0 1 N N N 111.138 139.666 124.290 -1.786 -4.240 1.677 O8 XJ7 38 XJ7 O9 O13 O 0 1 N N N 106.784 137.539 124.311 0.470 -1.331 -1.293 O9 XJ7 39 XJ7 P P1 P 0 1 N N N 105.471 138.500 128.107 -3.785 -0.342 -1.757 P XJ7 40 XJ7 H1 H1 H 0 1 N N N 111.772 143.156 121.130 -3.577 -1.618 5.010 H1 XJ7 41 XJ7 H2 H2 H 0 1 N N N 110.544 142.073 120.391 -5.047 -2.123 4.142 H2 XJ7 42 XJ7 H3 H3 H 0 1 N N N 110.046 143.298 121.607 -4.403 -3.128 5.462 H3 XJ7 43 XJ7 H4 H4 H 0 1 N N N 109.449 141.084 129.971 -7.513 -0.916 0.782 H4 XJ7 44 XJ7 H5 H5 H 0 1 N N N 111.464 136.923 119.132 7.340 0.858 0.975 H5 XJ7 45 XJ7 H6 H6 H 0 1 N N N 111.078 138.059 120.469 7.471 1.453 -0.698 H6 XJ7 46 XJ7 H7 H7 H 0 1 N N N 111.763 139.173 118.317 9.093 -0.833 0.511 H7 XJ7 47 XJ7 H8 H8 H 0 1 N N N 110.151 139.670 118.935 9.225 -0.238 -1.161 H8 XJ7 48 XJ7 H9 H9 H 0 1 N N N 111.146 140.028 116.113 11.633 0.308 -0.777 H9 XJ7 49 XJ7 H10 H10 H 0 1 N N N 109.392 140.330 116.353 11.501 -0.287 0.895 H10 XJ7 50 XJ7 H11 H11 H 0 1 N N N 108.979 138.341 114.790 12.287 2.545 0.070 H11 XJ7 51 XJ7 H12 H12 H 0 1 N N N 110.730 138.411 114.398 12.155 1.950 1.742 H12 XJ7 52 XJ7 H13 H13 H 0 1 N N N 110.466 140.728 113.606 13.909 0.259 1.279 H13 XJ7 53 XJ7 H14 H14 H 0 1 N N N 108.717 140.672 114.012 14.040 0.854 -0.393 H14 XJ7 54 XJ7 H15 H15 H 0 1 N N N 108.870 140.077 110.274 16.316 0.805 1.663 H15 XJ7 55 XJ7 H16 H16 H 0 1 N N N 108.237 141.205 111.521 16.448 1.400 -0.009 H16 XJ7 56 XJ7 H17 H17 H 0 1 N N N 109.995 141.167 111.153 16.917 2.451 1.349 H17 XJ7 57 XJ7 H18 H18 H 0 1 N N N 108.991 139.408 131.979 -8.131 1.724 -0.466 H18 XJ7 58 XJ7 H19 H19 H 0 1 N N N 106.124 138.171 132.658 -6.679 3.658 -1.092 H19 XJ7 59 XJ7 H20 H20 H 0 1 N N N 107.705 139.329 133.866 -8.143 3.789 0.906 H20 XJ7 60 XJ7 H21 H21 H 0 1 N N N 106.223 141.053 134.333 -6.402 3.996 2.529 H21 XJ7 61 XJ7 H22 H22 H 0 1 N N N 107.149 134.584 122.767 2.656 0.361 -1.466 H22 XJ7 62 XJ7 H23 H23 H 0 1 N N N 108.455 135.712 123.265 2.524 -0.234 0.207 H23 XJ7 63 XJ7 H24 H24 H 0 1 N N N 107.178 136.915 121.036 4.278 -1.925 -0.257 H24 XJ7 64 XJ7 H25 H25 H 0 1 N N N 107.367 135.176 120.626 4.410 -1.330 -1.929 H25 XJ7 65 XJ7 H26 H26 H 0 1 N N N 109.713 135.261 120.815 5.064 0.907 -1.082 H26 XJ7 66 XJ7 H27 H27 H 0 1 N N N 109.676 136.788 121.759 4.932 0.312 0.591 H27 XJ7 67 XJ7 H28 H28 H 0 1 N N N 108.618 137.824 119.630 6.817 -0.784 -1.545 H28 XJ7 68 XJ7 H29 H29 H 0 1 N N N 109.220 136.352 118.795 6.686 -1.379 0.127 H29 XJ7 69 XJ7 H30 H30 H 0 1 N N N 109.048 138.202 117.338 9.879 1.999 -0.314 H30 XJ7 70 XJ7 H31 H31 H 0 1 N N N 110.636 137.589 116.764 9.747 1.404 1.359 H31 XJ7 71 XJ7 H32 H32 H 0 1 N N N 105.228 140.693 131.199 -4.575 2.728 0.914 H32 XJ7 72 XJ7 H33 H33 H 0 1 N N N 108.367 138.885 112.379 14.694 3.091 0.454 H33 XJ7 73 XJ7 H34 H34 H 0 1 N N N 110.125 138.848 112.011 14.563 2.496 2.126 H34 XJ7 74 XJ7 H35 H35 H 0 1 N N N 107.262 141.496 130.601 -6.026 0.793 1.539 H35 XJ7 75 XJ7 H36 H36 H 0 1 N N N 107.121 138.450 130.371 -5.876 1.322 -1.463 H36 XJ7 76 XJ7 H37 H37 H 0 1 N N N 108.470 138.049 127.164 -1.349 -1.129 -3.195 H37 XJ7 77 XJ7 H38 H38 H 0 1 N N N 107.322 139.142 126.319 -2.255 -2.613 -2.814 H38 XJ7 78 XJ7 H39 H39 H 0 1 N N N 107.932 136.267 125.463 0.134 -3.022 -2.467 H39 XJ7 79 XJ7 H40 H40 H 0 1 N N N 109.253 137.484 123.658 -1.387 -4.120 -0.894 H40 XJ7 80 XJ7 H41 H41 H 0 1 N N N 109.935 137.625 125.313 0.083 -3.615 -0.027 H41 XJ7 81 XJ7 H42 H42 H 0 1 N N N 108.986 141.457 122.950 -2.347 -1.469 2.840 H42 XJ7 82 XJ7 H43 H43 H 0 1 N N N 109.565 140.155 121.856 -3.817 -1.974 1.972 H43 XJ7 83 XJ7 H44 H44 H 0 1 N N N 111.867 140.895 122.120 -2.372 -3.593 4.118 H44 XJ7 84 XJ7 H45 H45 H 0 1 N N N 111.369 142.120 123.336 -3.842 -4.098 3.250 H45 XJ7 85 XJ7 H46 H46 H 0 1 N N N 105.148 139.410 134.369 -6.574 5.614 0.276 H46 XJ7 86 XJ7 H47 H47 H 0 1 N N N 109.314 141.294 133.298 -9.458 1.770 1.519 H47 XJ7 87 XJ7 H48 H48 H 0 1 N N N 103.741 138.939 131.426 -3.739 4.113 -0.844 H48 XJ7 88 XJ7 H49 H49 H 0 1 N N N 103.788 137.760 128.928 -5.091 -2.081 -1.507 H49 XJ7 89 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal XJ7 C23 C22 SING N N 1 XJ7 C22 C21 SING N N 2 XJ7 C21 C20 SING N N 3 XJ7 C20 C19 SING N N 4 XJ7 C19 C18 SING N N 5 XJ7 C18 C17 SING N N 6 XJ7 C17 C16 SING N N 7 XJ7 C16 C15 SING N N 8 XJ7 C15 C14 SING N N 9 XJ7 C14 C13 SING N N 10 XJ7 C13 C12 SING N N 11 XJ7 C10 C9 SING N N 12 XJ7 C9 C8 SING N N 13 XJ7 C12 C11 SING N N 14 XJ7 C8 C7 SING N N 15 XJ7 O10 C11 DOUB N N 16 XJ7 C11 O9 SING N N 17 XJ7 C7 O8 DOUB N N 18 XJ7 C7 O7 SING N N 19 XJ7 O9 C5 SING N N 20 XJ7 O7 C6 SING N N 21 XJ7 C6 C5 SING N N 22 XJ7 C5 C4 SING N N 23 XJ7 C4 O6 SING N N 24 XJ7 O5 P DOUB N N 25 XJ7 O6 P SING N N 26 XJ7 P O3 SING N N 27 XJ7 P O4 SING N N 28 XJ7 O3 C3 SING N N 29 XJ7 O11 C24 SING N N 30 XJ7 C3 C24 SING N N 31 XJ7 C3 C2 SING N N 32 XJ7 C24 C25 SING N N 33 XJ7 O2 C2 SING N N 34 XJ7 C2 C1 SING N N 35 XJ7 C25 O12 SING N N 36 XJ7 C25 C SING N N 37 XJ7 C1 C SING N N 38 XJ7 C1 O1 SING N N 39 XJ7 C O SING N N 40 XJ7 C10 H1 SING N N 41 XJ7 C10 H2 SING N N 42 XJ7 C10 H3 SING N N 43 XJ7 O11 H4 SING N N 44 XJ7 C16 H5 SING N N 45 XJ7 C16 H6 SING N N 46 XJ7 C17 H7 SING N N 47 XJ7 C17 H8 SING N N 48 XJ7 C19 H9 SING N N 49 XJ7 C19 H10 SING N N 50 XJ7 C20 H11 SING N N 51 XJ7 C20 H12 SING N N 52 XJ7 C21 H13 SING N N 53 XJ7 C21 H14 SING N N 54 XJ7 C23 H15 SING N N 55 XJ7 C23 H16 SING N N 56 XJ7 C23 H17 SING N N 57 XJ7 C25 H18 SING N N 58 XJ7 C1 H19 SING N N 59 XJ7 C H20 SING N N 60 XJ7 O H21 SING N N 61 XJ7 C12 H22 SING N N 62 XJ7 C12 H23 SING N N 63 XJ7 C13 H24 SING N N 64 XJ7 C13 H25 SING N N 65 XJ7 C14 H26 SING N N 66 XJ7 C14 H27 SING N N 67 XJ7 C15 H28 SING N N 68 XJ7 C15 H29 SING N N 69 XJ7 C18 H30 SING N N 70 XJ7 C18 H31 SING N N 71 XJ7 C2 H32 SING N N 72 XJ7 C22 H33 SING N N 73 XJ7 C22 H34 SING N N 74 XJ7 C24 H35 SING N N 75 XJ7 C3 H36 SING N N 76 XJ7 C4 H37 SING N N 77 XJ7 C4 H38 SING N N 78 XJ7 C5 H39 SING N N 79 XJ7 C6 H40 SING N N 80 XJ7 C6 H41 SING N N 81 XJ7 C8 H42 SING N N 82 XJ7 C8 H43 SING N N 83 XJ7 C9 H44 SING N N 84 XJ7 C9 H45 SING N N 85 XJ7 O1 H46 SING N N 86 XJ7 O12 H47 SING N N 87 XJ7 O2 H48 SING N N 88 XJ7 O4 H49 SING N N 89 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor XJ7 SMILES ACDLabs 12.01 "CCCC(=O)OCC(COP(OC1C(C(C(C(O)C1O)O)O)O)(O)=O)OC(CCCCCCCCCCCC)=O" XJ7 InChI InChI 1.03 "InChI=1S/C26H49O13P/c1-3-5-6-7-8-9-10-11-12-13-15-20(28)38-18(16-36-19(27)14-4-2)17-37-40(34,35)39-26-24(32)22(30)21(29)23(31)25(26)33/h18,21-26,29-33H,3-17H2,1-2H3,(H,34,35)/t18-,21-,22+,23-,24-,25+,26+/m0/s1" XJ7 InChIKey InChI 1.03 PJDJYKJPFGJDMA-QYTLEKTISA-N XJ7 SMILES_CANONICAL CACTVS 3.385 "CCCCCCCCCCCCC(=O)O[C@@H](COC(=O)CCC)CO[P](O)(=O)O[C@@H]1[C@@H](O)[C@H](O)[C@H](O)[C@H](O)[C@H]1O" XJ7 SMILES CACTVS 3.385 "CCCCCCCCCCCCC(=O)O[CH](COC(=O)CCC)CO[P](O)(=O)O[CH]1[CH](O)[CH](O)[CH](O)[CH](O)[CH]1O" XJ7 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCCCCCCCCCCCC(=O)O[C@@H](COC(=O)CCC)COP(=O)(O)OC1[C@@H]([C@H](C([C@H]([C@@H]1O)O)O)O)O" XJ7 SMILES "OpenEye OEToolkits" 2.0.7 "CCCCCCCCCCCCC(=O)OC(COC(=O)CCC)COP(=O)(O)OC1C(C(C(C(C1O)O)O)O)O" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier XJ7 "SYSTEMATIC NAME" ACDLabs 12.01 "(2S)-1-(butanoyloxy)-3-{[(R)-hydroxy{[(1r,2R,3S,4S,5R,6S)-2,3,4,5,6-pentahydroxycyclohexyl]oxy}phosphoryl]oxy}propan-2-yl tridecanoate" XJ7 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "[(2~{S})-1-butanoyloxy-3-[oxidanyl-[(2~{R},3~{S},5~{R},6~{S})-2,3,4,5,6-pentakis(oxidanyl)cyclohexyl]oxy-phosphoryl]oxy-propan-2-yl] tridecanoate" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site XJ7 "Create component" 2020-12-17 RCSB XJ7 "Initial release" 2021-09-22 RCSB ##