data_XJZ # _chem_comp.id XJZ _chem_comp.name "3-{2-[3-({2,4-diamino-6-[4-(trifluoromethyl)phenyl]pyrimidin-5-yl}oxy)propoxy]phenyl}propanoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C23 H23 F3 N4 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-11-23 _chem_comp.pdbx_modified_date 2023-12-08 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 476.448 _chem_comp.one_letter_code ? _chem_comp.three_letter_code XJZ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8F83 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal XJZ C1 C1 C 0 1 Y N N N N N -6.684 3.732 9.226 -5.123 3.182 0.254 C1 XJZ 1 XJZ C2 C2 C 0 1 Y N N N N N -6.026 2.789 11.195 -2.929 3.637 -0.303 C2 XJZ 2 XJZ C3 C3 C 0 1 Y N N N N N -6.266 4.034 11.863 -2.671 2.264 -0.364 C3 XJZ 3 XJZ C4 C4 C 0 1 N N N N N N -6.838 3.499 14.167 -0.527 1.582 0.407 C4 XJZ 4 XJZ C5 C5 C 0 1 N N N N N N -6.391 3.865 15.563 0.806 1.064 -0.137 C5 XJZ 5 XJZ C6 C6 C 0 1 N N N N N N -6.674 5.310 15.906 1.775 0.831 1.025 C6 XJZ 6 XJZ C7 C7 C 0 1 Y N N N N N -8.580 6.789 16.117 3.997 0.088 1.425 C7 XJZ 7 XJZ C20 C8 C 0 1 Y N N N N N -7.212 9.087 12.534 -3.091 -2.820 -0.246 C20 XJZ 8 XJZ C21 C9 C 0 1 N N N N N N -7.319 10.491 13.036 -2.869 -4.310 -0.299 C21 XJZ 9 XJZ C22 C10 C 0 1 Y N N N N N -6.355 8.792 11.490 -3.966 -2.287 0.684 C22 XJZ 10 XJZ C23 C11 C 0 1 Y N N N N N -6.229 7.487 11.061 -4.173 -0.924 0.737 C23 XJZ 11 XJZ N2 N1 N 0 1 Y N N N N N -6.263 2.642 9.882 -4.154 4.051 0.006 N2 XJZ 12 XJZ O1 O1 O 0 1 N N N N N N -6.005 4.194 13.214 -1.431 1.800 -0.678 O1 XJZ 13 XJZ O4 O2 O 0 1 N N N N N N -14.393 4.767 16.044 6.585 1.506 -3.358 O4 XJZ 14 XJZ C10 C12 C 0 1 Y N N N N N -9.634 9.322 16.512 5.990 -0.430 3.272 C10 XJZ 15 XJZ C11 C13 C 0 1 Y N N N N N -10.465 8.253 16.209 6.227 -0.636 1.926 C11 XJZ 16 XJZ C12 C14 C 0 1 Y N N N N N -9.973 6.960 16.010 5.233 -0.378 1.001 C12 XJZ 17 XJZ C13 C15 C 0 1 N N N N N N -10.882 5.791 15.652 5.491 -0.604 -0.466 C13 XJZ 18 XJZ C14 C16 C 0 1 N N N N N N -12.338 5.959 16.044 5.929 0.711 -1.115 C14 XJZ 19 XJZ C15 C17 C 0 1 N N N N N N -13.244 4.828 15.562 6.187 0.485 -2.582 C15 XJZ 20 XJZ C16 C18 C 0 1 Y N N N N N -6.708 5.096 11.102 -3.719 1.382 -0.097 C16 XJZ 21 XJZ C17 C19 C 0 1 Y N N N N N -6.979 6.462 11.628 -3.500 -0.084 -0.149 C17 XJZ 22 XJZ C18 C20 C 0 1 Y N N N N N -7.764 6.757 12.736 -2.620 -0.627 -1.084 C18 XJZ 23 XJZ C19 C21 C 0 1 Y N N N N N -7.910 8.068 13.165 -2.416 -1.991 -1.124 C19 XJZ 24 XJZ C8 C22 C 0 1 Y N N N N N -7.746 7.854 16.428 3.763 0.294 2.777 C8 XJZ 25 XJZ C9 C23 C 0 1 Y N N N N N -8.277 9.117 16.616 4.759 0.035 3.697 C9 XJZ 26 XJZ F1 F1 F 0 1 N N N N N N -6.623 10.628 14.159 -2.553 -4.688 -1.608 F1 XJZ 27 XJZ F2 F2 F 0 1 N N N N N N -8.541 10.855 13.342 -1.814 -4.654 0.553 F2 XJZ 28 XJZ F3 F3 F 0 1 N N N N N N -6.841 11.434 12.196 -4.033 -4.970 0.110 F3 XJZ 29 XJZ N1 N2 N 0 1 N N N N N N -6.937 3.596 7.907 -6.388 3.657 0.567 N1 XJZ 30 XJZ N3 N3 N 0 1 N N N N N N -5.512 1.719 11.858 -1.920 4.555 -0.560 N3 XJZ 31 XJZ N4 N4 N 0 1 Y N N N N N -6.903 4.945 9.780 -4.920 1.877 0.206 N4 XJZ 32 XJZ O2 O3 O 0 1 N N N N N N -8.106 5.525 15.898 3.020 0.348 0.517 O2 XJZ 33 XJZ O3 O4 O 0 1 N N N N N N -12.817 4.013 14.718 6.036 -0.614 -3.060 O3 XJZ 34 XJZ H1 H1 H 0 1 N N N N N N -7.888 3.795 14.025 -0.950 0.847 1.091 H1 XJZ 35 XJZ H2 H2 H 0 1 N N N N N N -6.740 2.413 14.020 -0.363 2.520 0.938 H2 XJZ 36 XJZ H3 H3 H 0 1 N N N N N N -6.920 3.222 16.282 0.643 0.127 -0.667 H3 XJZ 37 XJZ H4 H4 H 0 1 N N N N N N -5.308 3.690 15.643 1.230 1.800 -0.820 H4 XJZ 38 XJZ H5 H5 H 0 1 N N N N N N -6.273 5.537 16.905 1.938 1.769 1.556 H5 XJZ 39 XJZ H6 H6 H 0 1 N N N N N N -6.199 5.966 15.162 1.351 0.096 1.709 H6 XJZ 40 XJZ H7 H7 H 0 1 N N N N N N -5.788 9.578 11.013 -4.487 -2.938 1.370 H7 XJZ 41 XJZ H8 H8 H 0 1 N N N N N N -5.533 7.256 10.268 -4.856 -0.508 1.463 H8 XJZ 42 XJZ H9 H9 H 0 1 N N N N N N -14.855 4.026 15.669 6.738 1.313 -4.293 H9 XJZ 43 XJZ H10 H10 H 0 1 N N N N N N -10.049 10.307 16.665 6.768 -0.632 3.993 H10 XJZ 44 XJZ H11 H11 H 0 1 N N N N N N -11.528 8.426 16.124 7.189 -0.999 1.597 H11 XJZ 45 XJZ H12 H12 H 0 1 N N N N N N -10.838 5.647 14.562 6.278 -1.348 -0.586 H12 XJZ 46 XJZ H13 H13 H 0 1 N N N N N N -10.496 4.893 16.156 4.579 -0.959 -0.945 H13 XJZ 47 XJZ H14 H14 H 0 1 N N N N N N -12.705 6.903 15.615 5.142 1.455 -0.994 H14 XJZ 48 XJZ H15 H15 H 0 1 N N N N N N -12.398 6.007 17.141 6.841 1.066 -0.636 H15 XJZ 49 XJZ H16 H16 H 0 1 N N N N N N -8.264 5.960 13.267 -2.096 0.019 -1.773 H16 XJZ 50 XJZ H17 H17 H 0 1 N N N N N N -8.568 8.295 13.991 -1.731 -2.413 -1.845 H17 XJZ 51 XJZ H18 H18 H 0 1 N N N N N N -6.682 7.696 16.523 2.801 0.658 3.109 H18 XJZ 52 XJZ H19 H19 H 0 1 N N N N N N -7.624 9.946 16.845 4.577 0.195 4.750 H19 XJZ 53 XJZ H20 H20 H 0 1 N N N N N N -7.263 4.466 7.538 -7.109 3.033 0.747 H20 XJZ 54 XJZ H21 H21 H 0 1 N N N N N N -6.099 3.327 7.433 -6.552 4.612 0.606 H21 XJZ 55 XJZ H22 H22 H 0 1 N N N N N N -5.390 0.958 11.220 -1.029 4.246 -0.785 H22 XJZ 56 XJZ H23 H23 H 0 1 N N N N N N -4.628 1.966 12.255 -2.107 5.506 -0.515 H23 XJZ 57 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal XJZ N1 C1 SING N N 1 XJZ C1 N4 DOUB Y N 2 XJZ C1 N2 SING Y N 3 XJZ N4 C16 SING Y N 4 XJZ N2 C2 DOUB Y N 5 XJZ C23 C22 DOUB Y N 6 XJZ C23 C17 SING Y N 7 XJZ C16 C17 SING N N 8 XJZ C16 C3 DOUB Y N 9 XJZ C2 N3 SING N N 10 XJZ C2 C3 SING Y N 11 XJZ C22 C20 SING Y N 12 XJZ C17 C18 DOUB Y N 13 XJZ C3 O1 SING N N 14 XJZ F3 C21 SING N N 15 XJZ C20 C21 SING N N 16 XJZ C20 C19 DOUB Y N 17 XJZ C18 C19 SING Y N 18 XJZ C21 F2 SING N N 19 XJZ C21 F1 SING N N 20 XJZ O1 C4 SING N N 21 XJZ C4 C5 SING N N 22 XJZ O3 C15 DOUB N N 23 XJZ C15 C14 SING N N 24 XJZ C15 O4 SING N N 25 XJZ C5 C6 SING N N 26 XJZ C13 C12 SING N N 27 XJZ C13 C14 SING N N 28 XJZ O2 C6 SING N N 29 XJZ O2 C7 SING N N 30 XJZ C12 C7 DOUB Y N 31 XJZ C12 C11 SING Y N 32 XJZ C7 C8 SING Y N 33 XJZ C11 C10 DOUB Y N 34 XJZ C8 C9 DOUB Y N 35 XJZ C10 C9 SING Y N 36 XJZ C4 H1 SING N N 37 XJZ C4 H2 SING N N 38 XJZ C5 H3 SING N N 39 XJZ C5 H4 SING N N 40 XJZ C6 H5 SING N N 41 XJZ C6 H6 SING N N 42 XJZ C22 H7 SING N N 43 XJZ C23 H8 SING N N 44 XJZ O4 H9 SING N N 45 XJZ C10 H10 SING N N 46 XJZ C11 H11 SING N N 47 XJZ C13 H12 SING N N 48 XJZ C13 H13 SING N N 49 XJZ C14 H14 SING N N 50 XJZ C14 H15 SING N N 51 XJZ C18 H16 SING N N 52 XJZ C19 H17 SING N N 53 XJZ C8 H18 SING N N 54 XJZ C9 H19 SING N N 55 XJZ N1 H20 SING N N 56 XJZ N1 H21 SING N N 57 XJZ N3 H22 SING N N 58 XJZ N3 H23 SING N N 59 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor XJZ SMILES ACDLabs 12.01 "Nc1nc(c2ccc(cc2)C(F)(F)F)c(OCCCOc2ccccc2CCC(=O)O)c(N)n1" XJZ InChI InChI 1.06 "InChI=1S/C23H23F3N4O4/c24-23(25,26)16-9-6-15(7-10-16)19-20(21(27)30-22(28)29-19)34-13-3-12-33-17-5-2-1-4-14(17)8-11-18(31)32/h1-2,4-7,9-10H,3,8,11-13H2,(H,31,32)(H4,27,28,29,30)" XJZ InChIKey InChI 1.06 OSOFZLUZBIQDGQ-UHFFFAOYSA-N XJZ SMILES_CANONICAL CACTVS 3.385 "Nc1nc(N)c(OCCCOc2ccccc2CCC(O)=O)c(n1)c3ccc(cc3)C(F)(F)F" XJZ SMILES CACTVS 3.385 "Nc1nc(N)c(OCCCOc2ccccc2CCC(O)=O)c(n1)c3ccc(cc3)C(F)(F)F" XJZ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(c(c1)CCC(=O)O)OCCCOc2c(nc(nc2N)N)c3ccc(cc3)C(F)(F)F" XJZ SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc(c(c1)CCC(=O)O)OCCCOc2c(nc(nc2N)N)c3ccc(cc3)C(F)(F)F" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier XJZ "SYSTEMATIC NAME" ACDLabs 12.01 "3-{2-[3-({2,4-diamino-6-[4-(trifluoromethyl)phenyl]pyrimidin-5-yl}oxy)propoxy]phenyl}propanoic acid" XJZ "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "3-[2-[3-[2,4-bis(azanyl)-6-[4-(trifluoromethyl)phenyl]pyrimidin-5-yl]oxypropoxy]phenyl]propanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site XJZ "Create component" 2022-11-23 RCSB XJZ "Initial release" 2023-12-13 RCSB #