data_XK1 # _chem_comp.id XK1 _chem_comp.name "1-[(4R)-1,3-oxazolidin-4-yl]methanamine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C4 H10 N2 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-12-17 _chem_comp.pdbx_modified_date 2021-06-18 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 102.135 _chem_comp.one_letter_code ? _chem_comp.three_letter_code XK1 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5S84 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal XK1 N01 N1 N 0 1 N N N -28.029 34.471 8.963 -2.600 0.328 -0.046 N01 XK1 1 XK1 C02 C1 C 0 1 N N N -27.264 33.288 9.297 -1.550 -0.626 0.335 C02 XK1 2 XK1 C03 C2 C 0 1 N N R -26.164 33.568 10.319 -0.286 -0.345 -0.480 C03 XK1 3 XK1 C04 C3 C 0 1 N N N -26.670 34.170 11.643 0.892 -1.195 0.045 C04 XK1 4 XK1 O05 O1 O 0 1 N N N -25.715 34.859 12.071 2.026 -0.301 -0.049 O05 XK1 5 XK1 C06 C4 C 0 1 N N N -25.037 35.419 10.757 1.490 0.985 0.331 C06 XK1 6 XK1 N07 N2 N 0 1 N N N -25.179 34.536 9.804 0.149 1.058 -0.291 N07 XK1 7 XK1 H012 H1 H 0 0 N N N -28.733 34.235 8.293 -3.446 0.164 0.479 H012 XK1 8 XK1 H011 H2 H 0 0 N N N -28.462 34.832 9.789 -2.283 1.280 0.068 H011 XK1 9 XK1 H021 H4 H 0 0 N N N -27.947 32.533 9.713 -1.329 -0.518 1.397 H021 XK1 10 XK1 H022 H5 H 0 0 N N N -26.801 32.897 8.379 -1.892 -1.641 0.136 H022 XK1 11 XK1 H031 H6 H 0 0 N N N -25.652 32.621 10.545 -0.463 -0.549 -1.536 H031 XK1 12 XK1 H041 H7 H 0 0 N N N -27.554 34.801 11.468 0.721 -1.490 1.080 H041 XK1 13 XK1 H042 H8 H 0 0 N N N -26.923 33.374 12.358 1.041 -2.073 -0.583 H042 XK1 14 XK1 H061 H9 H 0 0 N N N -25.521 36.362 10.463 1.407 1.053 1.415 H061 XK1 15 XK1 H062 H10 H 0 0 N N N -23.967 35.598 10.940 2.127 1.785 -0.049 H062 XK1 16 XK1 H071 H11 H 0 0 N N N -25.518 34.971 8.970 -0.496 1.560 0.300 H071 XK1 17 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal XK1 C02 N01 SING N N 1 XK1 C03 C02 SING N N 2 XK1 C04 C03 SING N N 3 XK1 O05 C04 SING N N 4 XK1 C06 O05 SING N N 5 XK1 N07 C06 SING N N 6 XK1 C03 N07 SING N N 7 XK1 N01 H012 SING N N 8 XK1 N01 H011 SING N N 9 XK1 C02 H021 SING N N 10 XK1 C02 H022 SING N N 11 XK1 C03 H031 SING N N 12 XK1 C04 H041 SING N N 13 XK1 C04 H042 SING N N 14 XK1 C06 H061 SING N N 15 XK1 C06 H062 SING N N 16 XK1 N07 H071 SING N N 17 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor XK1 SMILES ACDLabs 12.01 NCC1NCOC1 XK1 InChI InChI 1.03 "InChI=1S/C4H10N2O/c5-1-4-2-7-3-6-4/h4,6H,1-3,5H2/t4-/m1/s1" XK1 InChIKey InChI 1.03 JUAFUPTWZIUUQO-SCSAIBSYSA-N XK1 SMILES_CANONICAL CACTVS 3.385 NC[C@@H]1COCN1 XK1 SMILES CACTVS 3.385 NC[CH]1COCN1 XK1 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C1[C@H](NCO1)CN" XK1 SMILES "OpenEye OEToolkits" 2.0.7 "C1C(NCO1)CN" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier XK1 "SYSTEMATIC NAME" ACDLabs 12.01 "1-[(4R)-1,3-oxazolidin-4-yl]methanamine" XK1 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "[(4~{R})-1,3-oxazolidin-4-yl]methanamine" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site XK1 "Create component" 2020-12-17 RCSB XK1 "Initial release" 2021-06-23 RCSB ##