data_XK9 # _chem_comp.id XK9 _chem_comp.name "N-{4-[(1E)-N-(N-hydroxycarbamimidoyl)ethanehydrazonoyl]phenyl}-7-nitro-1H-indole-2-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C18 H17 N7 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2010-07-07 _chem_comp.pdbx_modified_date 2011-07-15 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 395.372 _chem_comp.one_letter_code ? _chem_comp.three_letter_code XK9 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 2XK9 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal XK9 O3 O3 O -1 1 N N N -49.425 16.017 -3.837 -7.056 3.045 0.507 O3 XK9 1 XK9 N7 N7 N 1 1 N N N -48.575 17.121 -3.492 -6.087 2.318 0.380 N7 XK9 2 XK9 O2 O2 O 0 1 N N N -48.652 17.613 -2.163 -4.965 2.767 0.525 O2 XK9 3 XK9 C3 C3 C 0 1 Y N N -47.714 17.681 -4.358 -6.275 0.886 0.056 C3 XK9 4 XK9 C2 C2 C 0 1 Y N N -47.055 18.857 -3.997 -7.543 0.374 -0.102 C2 XK9 5 XK9 C4 C4 C 0 1 Y N N -47.453 17.109 -5.602 -5.169 0.054 -0.095 C4 XK9 6 XK9 N1 N1 N 0 1 Y N N -47.929 16.036 -6.211 -3.813 0.265 -0.006 N1 XK9 7 XK9 C8 C8 C 0 1 Y N N -47.331 15.956 -7.410 -3.160 -0.927 -0.251 C8 XK9 8 XK9 C7 C7 C 0 1 Y N N -46.506 16.991 -7.598 -4.080 -1.897 -0.495 C7 XK9 9 XK9 C5 C5 C 0 1 Y N N -46.551 17.721 -6.480 -5.364 -1.307 -0.404 C5 XK9 10 XK9 C6 C6 C 0 1 Y N N -45.911 18.899 -6.116 -6.664 -1.804 -0.556 C6 XK9 11 XK9 C1 C1 C 0 1 Y N N -46.158 19.468 -4.874 -7.733 -0.968 -0.407 C1 XK9 12 XK9 C9 C9 C 0 1 N N N -47.615 14.855 -8.434 -1.702 -1.117 -0.249 C9 XK9 13 XK9 O1 O1 O 0 1 N N N -48.507 14.033 -8.196 -1.231 -2.214 -0.478 O1 XK9 14 XK9 N2 N2 N 0 1 N N N -46.865 14.901 -9.553 -0.888 -0.074 0.008 N2 XK9 15 XK9 C10 C10 C 0 1 Y N N -47.023 14.095 -10.632 0.490 -0.275 0.120 C10 XK9 16 XK9 C15 C15 C 0 1 Y N N -46.213 14.293 -11.760 1.371 0.715 -0.301 C15 XK9 17 XK9 C14 C14 C 0 1 Y N N -46.371 13.515 -12.917 2.731 0.521 -0.193 C14 XK9 18 XK9 C13 C13 C 0 1 Y N N -47.370 12.522 -12.977 3.224 -0.673 0.340 C13 XK9 19 XK9 C12 C12 C 0 1 Y N N -48.174 12.348 -11.849 2.335 -1.666 0.763 C12 XK9 20 XK9 C11 C11 C 0 1 Y N N -48.010 13.128 -10.702 0.976 -1.462 0.656 C11 XK9 21 XK9 C16 C16 C 0 1 N N N -47.544 11.741 -14.127 4.678 -0.886 0.457 C16 XK9 22 XK9 C17 C17 C 0 1 N N N -48.186 10.365 -14.096 5.207 -2.174 1.033 C17 XK9 23 XK9 N3 N3 N 0 1 N N N -47.137 12.231 -15.295 5.502 0.037 0.064 N3 XK9 24 XK9 N4 N4 N 0 1 N N N -47.212 11.626 -16.383 6.884 -0.165 0.175 N4 XK9 25 XK9 C18 C18 C 0 1 N N N -46.791 12.245 -17.507 7.758 0.813 -0.241 C18 XK9 26 XK9 N6 N6 N 0 1 N N N -46.868 11.690 -18.709 7.300 1.927 -0.739 N6 XK9 27 XK9 N5 N5 N 0 1 N N N -46.284 13.457 -17.449 9.115 0.615 -0.132 N5 XK9 28 XK9 OBC OBC O 0 1 N N N -45.865 14.068 -18.605 10.014 1.621 -0.561 OBC XK9 29 XK9 H2 H2 H 0 1 N N N -47.241 19.299 -3.029 -8.400 1.022 0.012 H2 XK9 30 XK9 H1 H1 H 0 1 N N N -45.657 20.381 -4.587 -8.734 -1.353 -0.528 H1 XK9 31 XK9 HA HA H 0 1 N N N -48.609 15.401 -5.845 -3.386 1.112 0.196 HA XK9 32 XK9 H7 H7 H 0 1 N N N -45.918 17.197 -8.481 -3.870 -2.933 -0.720 H7 XK9 33 XK9 H6 H6 H 0 1 N N N -45.221 19.372 -6.799 -6.821 -2.846 -0.793 H6 XK9 34 XK9 HB HB H 0 1 N N N -46.135 15.583 -9.590 -1.258 0.816 0.116 HB XK9 35 XK9 H15 H15 H 0 1 N N N -45.453 15.060 -11.737 0.990 1.638 -0.713 H15 XK9 36 XK9 H11 H11 H 0 1 N N N -48.664 12.974 -9.856 0.289 -2.226 0.986 H11 XK9 37 XK9 H14 H14 H 0 1 N N N -45.724 13.678 -13.766 3.415 1.289 -0.521 H14 XK9 38 XK9 H12 H12 H 0 1 N N N -48.943 11.590 -11.864 2.712 -2.590 1.175 H12 XK9 39 XK9 H171 H171 H 0 0 N N N -48.341 10.009 -15.125 5.350 -2.899 0.231 H171 XK9 40 XK9 H172 H172 H 0 0 N N N -47.527 9.665 -13.562 6.161 -1.986 1.527 H172 XK9 41 XK9 H173 H173 H 0 0 N N N -49.155 10.424 -13.579 4.495 -2.569 1.757 H173 XK9 42 XK9 H4 H4 H 0 1 N N N -47.578 10.696 -16.422 7.225 -0.994 0.546 H4 XK9 43 XK9 H5 H5 H 0 1 N N N -46.204 13.929 -16.571 9.456 -0.214 0.238 H5 XK9 44 XK9 HBC HBC H 0 1 N N N -45.768 15.001 -18.454 10.946 1.391 -0.445 HBC XK9 45 XK9 H6A H6A H 0 1 N N N -46.507 12.303 -19.411 7.916 2.617 -1.033 H6A XK9 46 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal XK9 O3 N7 SING N N 1 XK9 N7 O2 DOUB N N 2 XK9 N7 C3 SING N N 3 XK9 C3 C2 SING Y N 4 XK9 C3 C4 DOUB Y N 5 XK9 C2 C1 DOUB Y N 6 XK9 C4 N1 SING Y N 7 XK9 C4 C5 SING Y N 8 XK9 N1 C8 SING Y N 9 XK9 C8 C7 DOUB Y N 10 XK9 C8 C9 SING N N 11 XK9 C7 C5 SING Y N 12 XK9 C5 C6 DOUB Y N 13 XK9 C6 C1 SING Y N 14 XK9 C9 O1 DOUB N N 15 XK9 C9 N2 SING N N 16 XK9 N2 C10 SING N N 17 XK9 C10 C15 SING Y N 18 XK9 C10 C11 DOUB Y N 19 XK9 C15 C14 DOUB Y N 20 XK9 C14 C13 SING Y N 21 XK9 C13 C12 DOUB Y N 22 XK9 C13 C16 SING N N 23 XK9 C12 C11 SING Y N 24 XK9 C16 C17 SING N N 25 XK9 C16 N3 DOUB N N 26 XK9 N3 N4 SING N N 27 XK9 N4 C18 SING N N 28 XK9 C18 N6 DOUB N N 29 XK9 C18 N5 SING N N 30 XK9 N5 OBC SING N N 31 XK9 C2 H2 SING N N 32 XK9 C1 H1 SING N N 33 XK9 N1 HA SING N N 34 XK9 C7 H7 SING N N 35 XK9 C6 H6 SING N E 36 XK9 N2 HB SING N N 37 XK9 C15 H15 SING N N 38 XK9 C11 H11 SING N N 39 XK9 C14 H14 SING N N 40 XK9 C12 H12 SING N N 41 XK9 C17 H171 SING N N 42 XK9 C17 H172 SING N N 43 XK9 C17 H173 SING N N 44 XK9 N4 H4 SING N N 45 XK9 N5 H5 SING N N 46 XK9 OBC HBC SING N N 47 XK9 N6 H6A SING N N 48 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor XK9 SMILES ACDLabs 10.04 "[O-][N+](=O)c1cccc2c1nc(c2)C(=O)Nc3ccc(\C(=N\NC(=[N@H])NO)C)cc3" XK9 SMILES_CANONICAL CACTVS 3.352 "CC(=N\NC(=N)NO)/c1ccc(NC(=O)c2[nH]c3c(cccc3[N+]([O-])=O)c2)cc1" XK9 SMILES CACTVS 3.352 "CC(=NNC(=N)NO)c1ccc(NC(=O)c2[nH]c3c(cccc3[N+]([O-])=O)c2)cc1" XK9 SMILES_CANONICAL "OpenEye OEToolkits" 1.6.1 "C/C(=N\NC(=N)NO)/c1ccc(cc1)NC(=O)c2cc3cccc(c3[nH]2)[N+](=O)[O-]" XK9 SMILES "OpenEye OEToolkits" 1.6.1 "CC(=NNC(=N)NO)c1ccc(cc1)NC(=O)c2cc3cccc(c3[nH]2)[N+](=O)[O-]" XK9 InChI InChI 1.03 "InChI=1S/C18H17N7O4/c1-10(22-23-18(19)24-27)11-5-7-13(8-6-11)20-17(26)14-9-12-3-2-4-15(25(28)29)16(12)21-14/h2-9,21,27H,1H3,(H,20,26)(H3,19,23,24)/b22-10+" XK9 InChIKey InChI 1.03 CTGMEYONMRTKGL-LSHDLFTRSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier XK9 "SYSTEMATIC NAME" ACDLabs 10.04 "N-{4-[(1E)-N-(N-hydroxycarbamimidoyl)ethanehydrazonoyl]phenyl}-7-nitro-1H-indole-2-carboxamide" XK9 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.6.1 "N-[4-[N-[(N-hydroxycarbamimidoyl)amino]-C-methyl-carbonimidoyl]phenyl]-7-nitro-1H-indole-2-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site XK9 "Create component" 2010-07-07 EBI XK9 "Modify aromatic_flag" 2011-06-04 RCSB XK9 "Modify descriptor" 2011-06-04 RCSB #