data_XKE # _chem_comp.id XKE _chem_comp.name "(1~{R},3~{a}~{R},6~{a}~{R})-4-phenyl-3~{a}-(1-phenylethenyl)-5-[9-(1~{H}-1,2,3,4-tetrazol-5-yl)nonyl]-2,3,6,6~{a}-tetrahydro-1~{H}-pentalen-1-ol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C32 H40 N4 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-11-23 _chem_comp.pdbx_modified_date 2023-11-24 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 496.686 _chem_comp.one_letter_code ? _chem_comp.three_letter_code XKE _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8F8M _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal XKE C15 C1 C 0 1 N N N N N N 25.031 -32.956 4.523 1.287 -0.317 -1.087 C15 XKE 1 XKE C12 C2 C 0 1 N N N N N N 25.999 -29.827 6.172 -2.428 -0.559 -0.190 C12 XKE 2 XKE C10 C3 C 0 1 N N R N N N 25.305 -27.643 5.332 -3.935 -1.555 1.425 C10 XKE 3 XKE C18 C4 C 0 1 N N N N N N 24.360 -35.177 1.774 5.045 -0.315 -0.247 C18 XKE 4 XKE C13 C5 C 0 1 N N N N N N 25.874 -31.310 6.357 -1.210 -0.399 -1.064 C13 XKE 5 XKE C20 C6 C 0 1 N N N N N N 25.293 -35.727 -0.518 7.542 -0.234 -0.270 C20 XKE 6 XKE C16 C7 C 0 1 N N N N N N 25.138 -33.079 2.993 2.548 -0.397 -0.224 C16 XKE 7 XKE C17 C8 C 0 1 N N N N N N 25.515 -34.482 2.508 3.784 -0.235 -1.110 C17 XKE 8 XKE C11 C9 C 0 1 N N N N N N 24.791 -29.022 5.757 -3.018 -1.886 0.224 C11 XKE 9 XKE C19 C10 C 0 1 N N N N N N 24.320 -34.855 0.282 6.281 -0.154 -1.134 C19 XKE 10 XKE C14 C11 C 0 1 N N N N N N 26.221 -32.232 5.160 0.051 -0.479 -0.200 C14 XKE 11 XKE C01 C12 C 0 1 N N N N N N 28.597 -26.674 4.072 -6.536 0.868 0.923 C01 XKE 12 XKE C02 C13 C 0 1 N N N N N N 27.500 -27.443 4.119 -5.591 0.084 0.423 C02 XKE 13 XKE C03 C14 C 0 1 Y N N N N N 26.985 -28.019 2.834 -5.827 -0.642 -0.843 C03 XKE 14 XKE C04 C15 C 0 1 Y N N N N N 26.359 -27.242 1.851 -5.902 0.057 -2.048 C04 XKE 15 XKE C05 C16 C 0 1 Y N N N N N 25.883 -27.791 0.658 -6.123 -0.627 -3.226 C05 XKE 16 XKE C06 C17 C 0 1 Y N N N N N 26.017 -29.149 0.398 -6.270 -2.002 -3.214 C06 XKE 17 XKE C07 C18 C 0 1 Y N N N N N 26.634 -29.941 1.355 -6.198 -2.701 -2.022 C07 XKE 18 XKE C08 C19 C 0 1 Y N N N N N 27.107 -29.384 2.547 -5.971 -2.030 -0.838 C08 XKE 19 XKE C09 C20 C 0 1 N N R N N N 26.849 -27.680 5.482 -4.277 -0.067 1.145 C09 XKE 20 XKE C21 C21 C 0 1 N N N N N N 25.712 -35.062 -1.824 8.778 -0.072 -1.157 C21 XKE 21 XKE C22 C22 C 0 1 Y N N N N N 27.159 -35.303 -2.126 10.020 -0.150 -0.307 C22 XKE 22 XKE C27 C23 C 0 1 N N N N N N 27.131 -29.059 6.106 -3.120 0.444 0.321 C27 XKE 23 XKE C28 C24 C 0 1 Y N N N N N 28.513 -29.463 6.419 -2.806 1.873 0.113 C28 XKE 24 XKE C29 C25 C 0 1 Y N N N N N 29.444 -29.725 5.408 -2.336 2.649 1.173 C29 XKE 25 XKE C30 C26 C 0 1 Y N N N N N 30.755 -30.112 5.683 -2.044 3.982 0.972 C30 XKE 26 XKE C31 C27 C 0 1 Y N N N N N 31.186 -30.261 6.993 -2.218 4.551 -0.277 C31 XKE 27 XKE C32 C28 C 0 1 Y N N N N N 30.283 -30.013 8.018 -2.685 3.787 -1.332 C32 XKE 28 XKE C33 C29 C 0 1 Y N N N N N 28.972 -29.624 7.736 -2.973 2.451 -1.146 C33 XKE 29 XKE C34 C30 C 0 1 N N R N N N 24.784 -26.486 6.226 -3.083 -1.549 2.704 C34 XKE 30 XKE C36 C31 C 0 1 N N N N N N 25.864 -26.245 7.284 -3.296 -0.194 3.392 C36 XKE 31 XKE C37 C32 C 0 1 N N N N N N 27.146 -26.541 6.518 -4.303 0.601 2.528 C37 XKE 32 XKE N23 N1 N 0 1 Y N N N N N 28.090 -35.908 -1.357 11.060 -0.987 -0.479 N23 XKE 33 XKE N24 N2 N 0 1 Y N N N N N 29.240 -35.868 -2.080 11.911 -0.733 0.457 N24 XKE 34 XKE N25 N3 N 0 1 Y N N N N N 29.093 -35.279 -3.238 11.448 0.216 1.193 N25 XKE 35 XKE N26 N4 N 0 1 Y N N N N N 27.772 -34.904 -3.296 10.299 0.586 0.741 N26 XKE 36 XKE O35 O1 O 0 1 N N N N N N 24.629 -25.322 5.467 -3.503 -2.605 3.571 O35 XKE 37 XKE H1 H1 H 0 1 N N N N N N 24.114 -32.399 4.765 1.251 0.650 -1.588 H1 XKE 38 XKE H2 H2 H 0 1 N N N N N N 24.969 -33.968 4.951 1.306 -1.112 -1.832 H2 XKE 39 XKE H3 H3 H 0 1 N N N N N N 25.039 -27.450 4.282 -4.813 -2.197 1.486 H3 XKE 40 XKE H4 H4 H 0 1 N N N N N N 23.412 -34.854 2.228 5.026 0.479 0.498 H4 XKE 41 XKE H5 H5 H 0 1 N N N N N N 24.472 -36.265 1.895 5.081 -1.283 0.254 H5 XKE 42 XKE H6 H6 H 0 1 N N N N N N 24.830 -31.517 6.635 -1.191 -1.194 -1.809 H6 XKE 43 XKE H7 H7 H 0 1 N N N N N N 26.538 -31.592 7.188 -1.246 0.568 -1.565 H7 XKE 44 XKE H8 H8 H 0 1 N N N N N N 24.805 -36.685 -0.748 7.523 0.561 0.475 H8 XKE 45 XKE H9 H9 H 0 1 N N N N N N 26.190 -35.910 0.092 7.578 -1.201 0.231 H9 XKE 46 XKE H10 H10 H 0 1 N N N N N N 25.905 -32.373 2.642 2.529 0.398 0.522 H10 XKE 47 XKE H11 H11 H 0 1 N N N N N N 24.165 -32.811 2.555 2.584 -1.365 0.277 H11 XKE 48 XKE H12 H12 H 0 1 N N N N N N 25.799 -35.092 3.378 3.748 0.732 -1.612 H12 XKE 49 XKE H13 H13 H 0 1 N N N N N N 26.371 -34.401 1.822 3.803 -1.030 -1.856 H13 XKE 50 XKE H14 H14 H 0 1 N N N N N N 24.093 -28.923 6.602 -3.601 -2.313 -0.592 H14 XKE 51 XKE H15 H15 H 0 1 N N N N N N 24.280 -29.512 4.915 -2.229 -2.574 0.528 H15 XKE 52 XKE H16 H16 H 0 1 N N N N N N 24.590 -33.798 0.139 6.300 -0.948 -1.879 H16 XKE 53 XKE H17 H17 H 0 1 N N N N N N 23.300 -35.027 -0.091 6.245 0.814 -1.635 H17 XKE 54 XKE H18 H18 H 0 1 N N N N N N 26.932 -32.993 5.513 0.087 -1.446 0.301 H18 XKE 55 XKE H19 H19 H 0 1 N N N N N N 26.698 -31.616 4.384 0.032 0.316 0.545 H19 XKE 56 XKE H20 H20 H 0 1 N N N N N N 28.994 -26.244 4.979 -7.449 1.034 0.371 H20 XKE 57 XKE H21 H21 H 0 1 N N N N N N 29.084 -26.485 3.127 -6.392 1.342 1.883 H21 XKE 58 XKE H22 H22 H 0 1 N N N N N N 26.240 -26.182 2.021 -5.788 1.131 -2.059 H22 XKE 59 XKE H23 H23 H 0 1 N N N N N N 25.405 -27.152 -0.070 -6.181 -0.087 -4.160 H23 XKE 60 XKE H24 H24 H 0 1 N N N N N N 25.651 -29.576 -0.524 -6.443 -2.533 -4.139 H24 XKE 61 XKE H25 H25 H 0 1 N N N N N N 26.750 -31.000 1.177 -6.314 -3.775 -2.019 H25 XKE 62 XKE H26 H26 H 0 1 N N N N N N 27.583 -30.029 3.271 -5.914 -2.577 0.092 H26 XKE 63 XKE H27 H27 H 0 1 N N N N N N 25.540 -33.979 -1.744 8.797 -0.867 -1.903 H27 XKE 64 XKE H28 H28 H 0 1 N N N N N N 25.103 -35.471 -2.644 8.742 0.896 -1.658 H28 XKE 65 XKE H29 H29 H 0 1 N N N N N N 29.136 -29.624 4.378 -2.200 2.207 2.149 H29 XKE 66 XKE H30 H30 H 0 1 N N N N N N 31.441 -30.297 4.869 -1.680 4.584 1.792 H30 XKE 67 XKE H31 H31 H 0 1 N N N N N N 32.200 -30.563 7.210 -1.989 5.595 -0.430 H31 XKE 68 XKE H32 H32 H 0 1 N N N N N N 30.598 -30.122 9.045 -2.819 4.237 -2.305 H32 XKE 69 XKE H33 H33 H 0 1 N N N N N N 28.291 -29.442 8.555 -3.332 1.855 -1.972 H33 XKE 70 XKE H34 H34 H 0 1 N N N N N N 23.844 -26.788 6.711 -2.031 -1.673 2.449 H34 XKE 71 XKE H35 H35 H 0 1 N N N N N N 25.845 -25.205 7.641 -3.716 -0.345 4.387 H35 XKE 72 XKE H36 H36 H 0 1 N N N N N N 25.744 -26.928 8.138 -2.347 0.337 3.467 H36 XKE 73 XKE H37 H37 H 0 1 N N N N N N 27.930 -26.869 7.217 -3.972 1.637 2.451 H37 XKE 74 XKE H38 H38 H 0 1 N N N N N N 27.481 -25.636 5.990 -5.308 0.558 2.947 H38 XKE 75 XKE H39 H39 H 0 1 N N N N N N 27.960 -36.302 -0.447 11.152 -1.656 -1.175 H39 XKE 76 XKE H40 H40 H 0 1 N N N N N N 24.310 -24.621 6.023 -3.004 -2.656 4.398 H40 XKE 77 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal XKE N26 N25 SING Y N 1 XKE N26 C22 DOUB Y N 2 XKE N25 N24 DOUB Y N 3 XKE C22 C21 SING N N 4 XKE C22 N23 SING Y N 5 XKE N24 N23 SING Y N 6 XKE C21 C20 SING N N 7 XKE C20 C19 SING N N 8 XKE C19 C18 SING N N 9 XKE C06 C05 DOUB Y N 10 XKE C06 C07 SING Y N 11 XKE C05 C04 SING Y N 12 XKE C07 C08 DOUB Y N 13 XKE C18 C17 SING N N 14 XKE C04 C03 DOUB Y N 15 XKE C17 C16 SING N N 16 XKE C08 C03 SING Y N 17 XKE C03 C02 SING N N 18 XKE C16 C15 SING N N 19 XKE C01 C02 DOUB N N 20 XKE C02 C09 SING N N 21 XKE C15 C14 SING N N 22 XKE C14 C13 SING N N 23 XKE C10 C09 SING N N 24 XKE C10 C11 SING N N 25 XKE C10 C34 SING N N 26 XKE C29 C30 DOUB Y N 27 XKE C29 C28 SING Y N 28 XKE O35 C34 SING N N 29 XKE C09 C27 SING N N 30 XKE C09 C37 SING N N 31 XKE C30 C31 SING Y N 32 XKE C11 C12 SING N N 33 XKE C27 C12 DOUB N N 34 XKE C27 C28 SING N N 35 XKE C12 C13 SING N N 36 XKE C34 C36 SING N N 37 XKE C28 C33 DOUB Y N 38 XKE C37 C36 SING N N 39 XKE C31 C32 DOUB Y N 40 XKE C33 C32 SING Y N 41 XKE C15 H1 SING N N 42 XKE C15 H2 SING N N 43 XKE C10 H3 SING N N 44 XKE C18 H4 SING N N 45 XKE C18 H5 SING N N 46 XKE C13 H6 SING N N 47 XKE C13 H7 SING N N 48 XKE C20 H8 SING N N 49 XKE C20 H9 SING N N 50 XKE C16 H10 SING N N 51 XKE C16 H11 SING N N 52 XKE C17 H12 SING N N 53 XKE C17 H13 SING N N 54 XKE C11 H14 SING N N 55 XKE C11 H15 SING N N 56 XKE C19 H16 SING N N 57 XKE C19 H17 SING N N 58 XKE C14 H18 SING N N 59 XKE C14 H19 SING N N 60 XKE C01 H20 SING N N 61 XKE C01 H21 SING N N 62 XKE C04 H22 SING N N 63 XKE C05 H23 SING N N 64 XKE C06 H24 SING N N 65 XKE C07 H25 SING N N 66 XKE C08 H26 SING N N 67 XKE C21 H27 SING N N 68 XKE C21 H28 SING N N 69 XKE C29 H29 SING N N 70 XKE C30 H30 SING N N 71 XKE C31 H31 SING N N 72 XKE C32 H32 SING N N 73 XKE C33 H33 SING N N 74 XKE C34 H34 SING N N 75 XKE C36 H35 SING N N 76 XKE C36 H36 SING N N 77 XKE C37 H37 SING N N 78 XKE C37 H38 SING N N 79 XKE N23 H39 SING N N 80 XKE O35 H40 SING N N 81 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor XKE SMILES ACDLabs 12.01 "C=C(c1ccccc1)C12CCC(O)C2CC(CCCCCCCCCc2nnn[NH]2)=C1c1ccccc1" XKE InChI InChI 1.06 "InChI=1S/C32H40N4O/c1-24(25-15-10-7-11-16-25)32-22-21-29(37)28(32)23-27(31(32)26-17-12-8-13-18-26)19-9-5-3-2-4-6-14-20-30-33-35-36-34-30/h7-8,10-13,15-18,28-29,37H,1-6,9,14,19-23H2,(H,33,34,35,36)/t28-,29+,32-/m0/s1" XKE InChIKey InChI 1.06 KWRMCWKEHBRILN-LBRLCBGXSA-N XKE SMILES_CANONICAL CACTVS 3.385 "O[C@@H]1CC[C@@]2([C@H]1CC(=C2c3ccccc3)CCCCCCCCCc4[nH]nnn4)C(=C)c5ccccc5" XKE SMILES CACTVS 3.385 "O[CH]1CC[C]2([CH]1CC(=C2c3ccccc3)CCCCCCCCCc4[nH]nnn4)C(=C)c5ccccc5" XKE SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C=C(c1ccccc1)[C@@]23CC[C@H]([C@@H]2CC(=C3c4ccccc4)CCCCCCCCCc5[nH]nnn5)O" XKE SMILES "OpenEye OEToolkits" 2.0.7 "C=C(c1ccccc1)C23CCC(C2CC(=C3c4ccccc4)CCCCCCCCCc5[nH]nnn5)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier XKE "SYSTEMATIC NAME" ACDLabs 12.01 "(1R,3aR,6aR)-4-phenyl-3a-(1-phenylethenyl)-5-[9-(1H-tetrazol-5-yl)nonyl]-1,2,3,3a,6,6a-hexahydropentalen-1-ol (non-preferred name)" XKE "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(1~{R},3~{a}~{R},6~{a}~{R})-4-phenyl-3~{a}-(1-phenylethenyl)-5-[9-(1~{H}-1,2,3,4-tetrazol-5-yl)nonyl]-2,3,6,6~{a}-tetrahydro-1~{H}-pentalen-1-ol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site XKE "Create component" 2022-11-23 RCSB XKE "Initial release" 2023-11-29 RCSB #