data_XKP # _chem_comp.id XKP _chem_comp.name "(11R,14S)-17-amino-14-hydroxy-8,14-dioxo-9,13,15-trioxa-14lambda~5~-phosphaheptadecan-11-yl decanoate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C23 H46 N O8 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-12-18 _chem_comp.pdbx_modified_date 2021-09-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 495.587 _chem_comp.one_letter_code ? _chem_comp.three_letter_code XKP _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7L2U _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal XKP C11 C1 C 0 1 N N N 122.344 157.370 109.218 2.494 -0.127 -1.488 C11 XKP 1 XKP C14 C2 C 0 1 N N N 123.794 154.102 110.597 5.769 1.011 0.138 C14 XKP 2 XKP C15 C3 C 0 1 N N N 122.800 152.959 110.412 7.225 0.636 -0.142 C15 XKP 3 XKP C20 C4 C 0 1 N N N 120.056 154.884 115.419 -9.342 3.792 0.762 C20 XKP 4 XKP C21 C5 C 0 1 N N N 120.533 153.450 115.199 -10.257 3.967 1.976 C21 XKP 5 XKP C5 C6 C 0 1 N N N 118.037 157.829 109.394 -2.885 0.882 -1.633 C5 XKP 6 XKP N N1 N 0 1 N N N 120.362 161.773 100.900 -5.080 -1.608 2.363 N XKP 7 XKP C3 C7 C 0 1 N N N 118.556 156.041 111.133 -5.028 1.850 -0.847 C3 XKP 8 XKP C4 C8 C 0 1 N N N 117.582 156.532 110.062 -3.787 1.055 -0.438 C4 XKP 9 XKP C2 C9 C 0 1 N N N 118.529 156.862 112.422 -5.944 2.026 0.366 C2 XKP 10 XKP C1 C10 C 0 1 N N N 119.565 156.385 113.439 -7.185 2.821 -0.042 C1 XKP 11 XKP C C11 C 0 1 N N N 119.022 155.314 114.382 -8.101 2.996 1.171 C XKP 12 XKP C6 C12 C 0 1 N N N 119.627 157.310 107.714 -0.911 0.084 -2.703 C6 XKP 13 XKP C7 C13 C 0 1 N N R 120.716 158.382 107.849 0.357 -0.706 -2.370 C7 XKP 14 XKP C19 C14 C 0 1 N N N 124.454 149.722 111.783 10.514 1.785 1.498 C19 XKP 15 XKP C18 C15 C 0 1 N N N 123.840 151.113 111.786 9.598 1.023 0.538 C18 XKP 16 XKP C17 C16 C 0 1 N N N 125.040 149.346 113.141 11.971 1.410 1.218 C17 XKP 17 XKP C9 C17 C 0 1 N N N 119.396 159.861 102.066 -3.251 -3.233 2.261 C9 XKP 18 XKP C8 C18 C 0 1 N N N 120.675 159.307 106.631 -0.028 -2.049 -1.748 C8 XKP 19 XKP C16 C19 C 0 1 N N N 123.510 151.610 110.384 8.141 1.398 0.818 C16 XKP 20 XKP O1 O1 O 0 1 N N N 118.382 157.865 108.036 -1.729 0.211 -1.511 O1 XKP 21 XKP C10 C20 C 0 1 N N N 119.170 161.285 101.567 -4.098 -2.341 3.172 C10 XKP 22 XKP C12 C21 C 0 1 N N N 122.373 155.876 109.512 3.396 0.623 -0.542 C12 XKP 23 XKP O O2 O 0 1 N N N 118.086 158.831 110.021 -3.203 1.347 -2.702 O XKP 24 XKP C13 C22 C 0 1 N N N 123.169 155.484 110.752 4.853 0.249 -0.822 C13 XKP 25 XKP C22 C23 C 0 1 N N N 124.006 149.342 114.263 12.887 2.172 2.178 C22 XKP 26 XKP O2 O3 O 0 1 N N N 120.959 158.595 105.457 -0.874 -1.827 -0.618 O2 XKP 27 XKP O3 O4 O 0 1 N N N 118.449 158.285 104.901 -0.265 -3.788 1.023 O3 XKP 28 XKP O4 O5 O 0 1 N N N 120.120 157.379 103.337 -2.200 -3.974 -0.587 O4 XKP 29 XKP O5 O6 O 0 1 N N N 119.790 159.913 103.409 -2.479 -2.416 1.379 O5 XKP 30 XKP O6 O7 O 0 1 N N N 121.988 157.801 107.936 1.164 0.050 -1.429 O6 XKP 31 XKP O7 O8 O 0 1 N N N 122.620 158.153 110.059 2.967 -0.884 -2.302 O7 XKP 32 XKP P P1 P 0 1 N N N 119.805 158.514 104.278 -1.471 -3.022 0.280 P XKP 33 XKP H1 H1 H 0 1 N N N 124.389 153.894 111.499 5.517 0.748 1.165 H1 XKP 34 XKP H2 H2 H 0 1 N N N 124.456 154.124 109.718 5.635 2.083 -0.007 H2 XKP 35 XKP H3 H3 H 0 1 N N N 122.262 153.101 109.463 7.359 -0.436 0.002 H3 XKP 36 XKP H4 H4 H 0 1 N N N 122.082 152.969 111.245 7.477 0.898 -1.170 H4 XKP 37 XKP H5 H5 H 0 1 N N N 120.922 155.559 115.356 -9.876 3.255 -0.021 H5 XKP 38 XKP H6 H6 H 0 1 N N N 119.606 154.958 116.420 -9.040 4.771 0.391 H6 XKP 39 XKP H7 H7 H 0 1 N N N 121.274 153.187 115.968 -9.723 4.504 2.760 H7 XKP 40 XKP H8 H8 H 0 1 N N N 119.676 152.764 115.267 -11.142 4.534 1.685 H8 XKP 41 XKP H9 H9 H 0 1 N N N 120.992 153.365 114.203 -10.559 2.988 2.348 H9 XKP 42 XKP H10 H10 H 0 1 N N N 120.205 162.706 100.576 -5.650 -2.242 1.823 H10 XKP 43 XKP H11 H11 H 0 1 N N N 121.129 161.767 101.542 -5.652 -1.011 2.941 H11 XKP 44 XKP H13 H13 H 0 1 N N N 118.302 155.000 111.381 -4.726 2.829 -1.219 H13 XKP 45 XKP H14 H14 H 0 1 N N N 119.574 156.081 110.719 -5.562 1.313 -1.631 H14 XKP 46 XKP H15 H15 H 0 1 N N N 116.602 156.704 110.531 -4.089 0.075 -0.067 H15 XKP 47 XKP H16 H16 H 0 1 N N N 117.488 155.754 109.290 -3.253 1.592 0.345 H16 XKP 48 XKP H17 H17 H 0 1 N N N 118.735 157.914 112.175 -6.246 1.046 0.738 H17 XKP 49 XKP H18 H18 H 0 1 N N N 117.529 156.780 112.872 -5.410 2.563 1.150 H18 XKP 50 XKP H19 H19 H 0 1 N N N 120.426 155.970 112.895 -6.883 3.800 -0.414 H19 XKP 51 XKP H20 H20 H 0 1 N N N 119.892 157.248 114.038 -7.719 2.284 -0.826 H20 XKP 52 XKP H21 H21 H 0 1 N N N 118.141 155.715 114.905 -7.566 3.534 1.955 H21 XKP 53 XKP H22 H22 H 0 1 N N N 118.728 154.435 113.789 -8.403 2.017 1.543 H22 XKP 54 XKP H23 H23 H 0 1 N N N 119.606 156.938 106.679 -0.637 1.075 -3.064 H23 XKP 55 XKP H24 H24 H 0 1 N N N 119.845 156.477 108.399 -1.473 -0.441 -3.476 H24 XKP 56 XKP H25 H25 H 0 1 N N N 120.507 158.979 108.749 0.928 -0.878 -3.283 H25 XKP 57 XKP H26 H26 H 0 1 N N N 123.675 148.992 111.519 10.381 2.857 1.353 H26 XKP 58 XKP H27 H27 H 0 1 N N N 125.256 149.691 111.031 10.262 1.523 2.525 H27 XKP 59 XKP H28 H28 H 0 1 N N N 124.552 151.812 112.249 9.850 1.286 -0.490 H28 XKP 60 XKP H29 H29 H 0 1 N N N 122.913 151.088 112.378 9.732 -0.049 0.682 H29 XKP 61 XKP H30 H30 H 0 1 N N N 125.478 148.340 113.066 12.104 0.338 1.362 H30 XKP 62 XKP H31 H31 H 0 1 N N N 125.828 150.071 113.394 12.223 1.673 0.190 H31 XKP 63 XKP H32 H32 H 0 1 N N N 118.463 159.285 101.976 -2.583 -3.843 2.870 H32 XKP 64 XKP H33 H33 H 0 1 N N N 120.184 159.380 101.468 -3.904 -3.881 1.678 H33 XKP 65 XKP H34 H34 H 0 1 N N N 121.421 160.105 106.759 -0.558 -2.653 -2.485 H34 XKP 66 XKP H35 H35 H 0 1 N N N 119.672 159.752 106.549 0.873 -2.574 -1.430 H35 XKP 67 XKP H36 H36 H 0 1 N N N 122.857 150.875 109.890 8.008 2.470 0.673 H36 XKP 68 XKP H37 H37 H 0 1 N N N 124.445 151.712 109.813 7.890 1.135 1.845 H37 XKP 69 XKP H38 H38 H 0 1 N N N 118.938 161.938 102.421 -3.451 -1.632 3.690 H38 XKP 70 XKP H39 H39 H 0 1 N N N 118.328 161.294 100.860 -4.619 -2.959 3.903 H39 XKP 71 XKP H40 H40 H 0 1 N N N 121.337 155.534 109.648 3.262 1.696 -0.687 H40 XKP 72 XKP H41 H41 H 0 1 N N N 122.817 155.365 108.645 3.144 0.361 0.485 H41 XKP 73 XKP H42 H42 H 0 1 N N N 123.968 156.222 110.913 5.104 0.511 -1.850 H42 XKP 74 XKP H43 H43 H 0 1 N N N 122.496 155.477 111.622 4.986 -0.823 -0.678 H43 XKP 75 XKP H44 H44 H 0 1 N N N 124.492 149.064 115.210 13.925 1.905 1.978 H44 XKP 76 XKP H45 H45 H 0 1 N N N 123.565 150.345 114.358 12.753 3.244 2.033 H45 XKP 77 XKP H46 H46 H 0 1 N N N 123.215 148.614 114.030 12.635 1.910 3.205 H46 XKP 78 XKP H47 H47 H 0 1 N N N 118.080 157.475 104.569 0.257 -3.224 1.609 H47 XKP 79 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal XKP N C10 SING N N 1 XKP C10 C9 SING N N 2 XKP C9 O5 SING N N 3 XKP O4 P DOUB N N 4 XKP O5 P SING N N 5 XKP P O3 SING N N 6 XKP P O2 SING N N 7 XKP O2 C8 SING N N 8 XKP C8 C7 SING N N 9 XKP C6 C7 SING N N 10 XKP C6 O1 SING N N 11 XKP C7 O6 SING N N 12 XKP O6 C11 SING N N 13 XKP O1 C5 SING N N 14 XKP C11 C12 SING N N 15 XKP C11 O7 DOUB N N 16 XKP C5 O DOUB N N 17 XKP C5 C4 SING N N 18 XKP C12 C13 SING N N 19 XKP C4 C3 SING N N 20 XKP C16 C15 SING N N 21 XKP C16 C18 SING N N 22 XKP C15 C14 SING N N 23 XKP C14 C13 SING N N 24 XKP C3 C2 SING N N 25 XKP C19 C18 SING N N 26 XKP C19 C17 SING N N 27 XKP C2 C1 SING N N 28 XKP C17 C22 SING N N 29 XKP C1 C SING N N 30 XKP C C20 SING N N 31 XKP C21 C20 SING N N 32 XKP C14 H1 SING N N 33 XKP C14 H2 SING N N 34 XKP C15 H3 SING N N 35 XKP C15 H4 SING N N 36 XKP C20 H5 SING N N 37 XKP C20 H6 SING N N 38 XKP C21 H7 SING N N 39 XKP C21 H8 SING N N 40 XKP C21 H9 SING N N 41 XKP N H10 SING N N 42 XKP N H11 SING N N 43 XKP C3 H13 SING N N 44 XKP C3 H14 SING N N 45 XKP C4 H15 SING N N 46 XKP C4 H16 SING N N 47 XKP C2 H17 SING N N 48 XKP C2 H18 SING N N 49 XKP C1 H19 SING N N 50 XKP C1 H20 SING N N 51 XKP C H21 SING N N 52 XKP C H22 SING N N 53 XKP C6 H23 SING N N 54 XKP C6 H24 SING N N 55 XKP C7 H25 SING N N 56 XKP C19 H26 SING N N 57 XKP C19 H27 SING N N 58 XKP C18 H28 SING N N 59 XKP C18 H29 SING N N 60 XKP C17 H30 SING N N 61 XKP C17 H31 SING N N 62 XKP C9 H32 SING N N 63 XKP C9 H33 SING N N 64 XKP C8 H34 SING N N 65 XKP C8 H35 SING N N 66 XKP C16 H36 SING N N 67 XKP C16 H37 SING N N 68 XKP C10 H38 SING N N 69 XKP C10 H39 SING N N 70 XKP C12 H40 SING N N 71 XKP C12 H41 SING N N 72 XKP C13 H42 SING N N 73 XKP C13 H43 SING N N 74 XKP C22 H44 SING N N 75 XKP C22 H45 SING N N 76 XKP C22 H46 SING N N 77 XKP O3 H47 SING N N 78 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor XKP SMILES ACDLabs 12.01 "C(CCCCCCCCC)(=O)OC(COC(=O)CCCCCCC)COP(O)(=O)OCCN" XKP InChI InChI 1.03 "InChI=1S/C23H46NO8P/c1-3-5-7-9-10-12-14-16-23(26)32-21(20-31-33(27,28)30-18-17-24)19-29-22(25)15-13-11-8-6-4-2/h21H,3-20,24H2,1-2H3,(H,27,28)/t21-/m1/s1" XKP InChIKey InChI 1.03 VYUSSAVVRCGYLY-OAQYLSRUSA-N XKP SMILES_CANONICAL CACTVS 3.385 "CCCCCCCCCC(=O)O[C@H](COC(=O)CCCCCCC)CO[P](O)(=O)OCCN" XKP SMILES CACTVS 3.385 "CCCCCCCCCC(=O)O[CH](COC(=O)CCCCCCC)CO[P](O)(=O)OCCN" XKP SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCCCCCCCCC(=O)O[C@H](COC(=O)CCCCCCC)COP(=O)(O)OCCN" XKP SMILES "OpenEye OEToolkits" 2.0.7 "CCCCCCCCCC(=O)OC(COC(=O)CCCCCCC)COP(=O)(O)OCCN" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier XKP "SYSTEMATIC NAME" ACDLabs 12.01 "(11R,14S)-17-amino-14-hydroxy-8,14-dioxo-9,13,15-trioxa-14lambda~5~-phosphaheptadecan-11-yl decanoate" XKP "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "[(2~{R})-1-[2-azanylethoxy(oxidanyl)phosphoryl]oxy-3-octanoyloxy-propan-2-yl] decanoate" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site XKP "Create component" 2020-12-18 RCSB XKP "Initial release" 2021-09-22 RCSB ##