data_XL4
#
_chem_comp.id XL4
_chem_comp.name "(2R)-2-(1H-indol-3-yl)propan-1-amine"
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C11 H14 N2"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2020-12-18
_chem_comp.pdbx_modified_date 2022-12-09
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 174.242
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code XL4
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 7L1L
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
XL4 C1 C1 C 0 1 N N N 23.880 43.118 -0.681 -2.558 0.137 1.585 C1 XL4 1
XL4 C2 C2 C 0 1 N N R 24.129 44.250 0.317 -1.868 -0.370 0.317 C2 XL4 2
XL4 C3 C3 C 0 1 N N N 25.623 44.557 0.456 -2.775 -0.124 -0.891 C3 XL4 3
XL4 N1 N1 N 0 1 N N N 25.949 44.877 1.837 -3.994 -0.935 -0.760 N1 XL4 4
XL4 C4 C4 C 0 1 Y N N 23.315 45.494 0.038 -0.566 0.364 0.124 C4 XL4 5
XL4 C5 C5 C 0 1 Y N N 22.444 46.129 0.880 -0.412 1.689 -0.028 C5 XL4 6
XL4 N2 N2 N 0 1 Y N N 21.885 47.221 0.271 0.914 1.991 -0.176 N2 XL4 7
XL4 C6 C6 C 0 1 Y N N 22.378 47.318 -1.001 1.665 0.838 -0.121 C6 XL4 8
XL4 C7 C7 C 0 1 Y N N 22.104 48.252 -2.001 3.029 0.578 -0.213 C7 XL4 9
XL4 C8 C8 C 0 1 Y N N 22.745 48.087 -3.207 3.486 -0.718 -0.116 C8 XL4 10
XL4 C9 C9 C 0 1 Y N N 23.648 47.041 -3.416 2.600 -1.770 0.072 C9 XL4 11
XL4 C10 C10 C 0 1 Y N N 23.931 46.125 -2.424 1.256 -1.537 0.165 C10 XL4 12
XL4 C11 C11 C 0 1 Y N N 23.286 46.249 -1.187 0.771 -0.231 0.076 C11 XL4 13
XL4 H1 H1 H 0 1 N N N 24.503 42.251 -0.416 -2.754 1.205 1.489 H1 XL4 14
XL4 H2 H2 H 0 1 N N N 22.819 42.830 -0.651 -3.499 -0.395 1.724 H2 XL4 15
XL4 H3 H3 H 0 1 N N N 24.139 43.459 -1.694 -1.911 -0.038 2.445 H3 XL4 16
XL4 H4 H4 H 0 1 N N N 23.799 43.875 1.297 -1.672 -1.438 0.412 H4 XL4 17
XL4 H5 H5 H 0 1 N N N 26.204 43.678 0.141 -3.044 0.931 -0.934 H5 XL4 18
XL4 H6 H6 H 0 1 N N N 25.878 45.414 -0.184 -2.249 -0.404 -1.803 H6 XL4 19
XL4 H7 H7 H 0 1 N N N 26.926 45.075 1.912 -4.466 -0.740 0.110 H7 XL4 20
XL4 H8 H8 H 0 1 N N N 25.424 45.677 2.127 -4.610 -0.790 -1.546 H8 XL4 21
XL4 H10 H10 H 0 1 N N N 22.226 45.812 1.889 -1.216 2.410 -0.034 H10 XL4 22
XL4 H11 H11 H 0 1 N N N 21.224 47.845 0.688 1.272 2.883 -0.302 H11 XL4 23
XL4 H12 H12 H 0 1 N N N 21.418 49.069 -1.835 3.726 1.389 -0.360 H12 XL4 24
XL4 H13 H13 H 0 1 N N N 22.546 48.781 -4.010 4.545 -0.918 -0.188 H13 XL4 25
XL4 H14 H14 H 0 1 N N N 24.135 46.948 -4.375 2.974 -2.780 0.146 H14 XL4 26
XL4 H15 H15 H 0 1 N N N 24.637 45.327 -2.598 0.572 -2.360 0.311 H15 XL4 27
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
XL4 C9 C8 DOUB Y N 1
XL4 C9 C10 SING Y N 2
XL4 C8 C7 SING Y N 3
XL4 C10 C11 DOUB Y N 4
XL4 C7 C6 DOUB Y N 5
XL4 C11 C6 SING Y N 6
XL4 C11 C4 SING Y N 7
XL4 C6 N2 SING Y N 8
XL4 C1 C2 SING N N 9
XL4 C4 C2 SING N N 10
XL4 C4 C5 DOUB Y N 11
XL4 N2 C5 SING Y N 12
XL4 C2 C3 SING N N 13
XL4 C3 N1 SING N N 14
XL4 C1 H1 SING N N 15
XL4 C1 H2 SING N N 16
XL4 C1 H3 SING N N 17
XL4 C2 H4 SING N N 18
XL4 C3 H5 SING N N 19
XL4 C3 H6 SING N N 20
XL4 N1 H7 SING N N 21
XL4 N1 H8 SING N N 22
XL4 C5 H10 SING N N 23
XL4 N2 H11 SING N N 24
XL4 C7 H12 SING N N 25
XL4 C8 H13 SING N N 26
XL4 C9 H14 SING N N 27
XL4 C10 H15 SING N N 28
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
XL4 SMILES ACDLabs 12.01 "CC(CN)c1cnc2ccccc12"
XL4 InChI InChI 1.03 "InChI=1S/C11H14N2/c1-8(6-12)10-7-13-11-5-3-2-4-9(10)11/h2-5,7-8,13H,6,12H2,1H3/t8-/m0/s1"
XL4 InChIKey InChI 1.03 UNUICNBHOJTXMS-QMMMGPOBSA-N
XL4 SMILES_CANONICAL CACTVS 3.385 "C[C@@H](CN)c1c[nH]c2ccccc12"
XL4 SMILES CACTVS 3.385 "C[CH](CN)c1c[nH]c2ccccc12"
XL4 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@@H](CN)c1c[nH]c2c1cccc2"
XL4 SMILES "OpenEye OEToolkits" 2.0.7 "CC(CN)c1c[nH]c2c1cccc2"
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
XL4 "SYSTEMATIC NAME" ACDLabs 12.01 "(2R)-2-(1H-indol-3-yl)propan-1-amine"
XL4 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{R})-2-(1~{H}-indol-3-yl)propan-1-amine"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
XL4 "Create component" 2020-12-18 RCSB
XL4 "Initial release" 2022-12-14 RCSB
#