data_XLL # _chem_comp.id XLL _chem_comp.name "4-tert-butyl-2-chloro-5-[(1H-pyrazolo[3,4-b]pyridin-3-yl)methoxy]benzonitrile" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C18 H17 Cl N4 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-06-07 _chem_comp.pdbx_modified_date 2024-12-13 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 340.807 _chem_comp.one_letter_code ? _chem_comp.three_letter_code XLL _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7G3D _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal XLL C10 C1 C 0 1 N N N N N N -12.118 2.990 44.628 3.597 -2.627 -0.058 C10 XLL 1 XLL C13 C2 C 0 1 Y N N N N N -12.594 6.616 44.755 1.014 0.039 -0.241 C13 XLL 2 XLL O14 O1 O 0 1 N N N N N N -13.219 7.497 45.565 -0.324 0.161 -0.444 O14 XLL 3 XLL C15 C3 C 0 1 N N N N N N -13.695 7.025 46.824 -1.059 -1.044 -0.666 C15 XLL 4 XLL C16 C4 C 0 1 Y N N N N N -14.179 8.174 47.657 -2.516 -0.714 -0.870 C16 XLL 5 XLL C19 C5 C 0 1 Y N N N N N -14.424 9.966 49.047 -4.739 -0.291 -0.476 C19 XLL 6 XLL C21 C6 C 0 1 Y N N N N N -12.888 11.400 49.927 -5.855 -0.289 1.542 C21 XLL 7 XLL C22 C7 C 0 1 Y N N N N N -11.814 10.710 49.254 -4.701 -0.613 2.241 C22 XLL 8 XLL C23 C8 C 0 1 Y N N N N N -12.111 9.574 48.474 -3.522 -0.782 1.562 C23 XLL 9 XLL C24 C9 C 0 1 Y N N N N N -13.431 9.198 48.333 -3.531 -0.620 0.172 C24 XLL 10 XLL C1 C10 C 0 1 N N N N N N -11.056 8.939 42.087 2.205 3.599 0.258 C1 XLL 11 XLL C2 C11 C 0 1 N N N N N N -11.941 8.585 43.295 1.141 2.531 -0.005 C2 XLL 12 XLL C3 C12 C 0 1 N N N N N N -11.482 9.518 44.476 0.084 2.582 1.099 C3 XLL 13 XLL C4 C13 C 0 1 N N N N N N -13.443 8.892 42.859 0.478 2.795 -1.358 C4 XLL 14 XLL C5 C14 C 0 1 Y N N N N N -11.937 7.113 43.635 1.788 1.170 -0.019 C5 XLL 15 XLL C6 C15 C 0 1 Y N N N N N -11.315 6.131 42.857 3.150 1.053 0.189 C6 XLL 16 XLL C7 C16 C 0 1 Y N N N N N -11.373 4.799 43.163 3.750 -0.191 0.178 C7 XLL 17 XLL CL8 CL1 CL 0 0 N N N N N N -10.545 3.657 42.136 5.460 -0.333 0.440 CL8 XLL 18 XLL C9 C17 C 0 1 Y N N N N N -12.027 4.357 44.246 2.979 -1.335 -0.045 C9 XLL 19 XLL N11 N1 N 0 1 N N N N N N -12.229 1.870 44.984 4.087 -3.651 -0.068 N11 XLL 20 XLL C12 C18 C 0 1 Y N N N N N -12.634 5.249 45.025 1.603 -1.214 -0.250 C12 XLL 21 XLL N17 N2 N 0 1 Y N N N N N -15.481 8.290 47.948 -3.093 -0.455 -2.009 N17 XLL 22 XLL N18 N3 N 0 1 Y N N N N N -15.603 9.389 48.778 -4.452 -0.194 -1.810 N18 XLL 23 XLL N20 N4 N 0 1 Y N N N N N -14.201 11.026 49.840 -5.850 -0.139 0.235 N20 XLL 24 XLL H37 H1 H 0 1 N N N N N N -14.524 6.321 46.659 -0.673 -1.547 -1.553 H37 XLL 25 XLL H36 H2 H 0 1 N N N N N N -12.878 6.512 47.352 -0.953 -1.699 0.198 H36 XLL 26 XLL H39 H3 H 0 1 N N N N N N -12.642 12.259 50.533 -6.780 -0.157 2.084 H39 XLL 27 XLL H40 H4 H 0 1 N N N N N N -10.796 11.059 49.347 -4.731 -0.730 3.314 H40 XLL 28 XLL H41 H5 H 0 1 N N N N N N -11.323 9.010 47.997 -2.612 -1.034 2.086 H41 XLL 29 XLL H27 H6 H 0 1 N N N N N N -11.338 8.311 41.229 2.677 3.411 1.222 H27 XLL 30 XLL H25 H7 H 0 1 N N N N N N -11.197 9.999 41.828 2.958 3.563 -0.529 H25 XLL 31 XLL H26 H8 H 0 1 N N N N N N -10.001 8.761 42.341 1.737 4.583 0.269 H26 XLL 32 XLL H28 H9 H 0 1 N N N N N N -12.087 9.304 45.369 -0.384 3.566 1.110 H28 XLL 33 XLL H29 H10 H 0 1 N N N N N N -10.421 9.332 44.699 -0.674 1.821 0.912 H29 XLL 34 XLL H30 H11 H 0 1 N N N N N N -11.617 10.570 44.185 0.556 2.394 2.064 H30 XLL 35 XLL H32 H12 H 0 1 N N N N N N -14.123 8.655 43.691 1.232 2.759 -2.145 H32 XLL 36 XLL H33 H13 H 0 1 N N N N N N -13.539 9.957 42.599 -0.280 2.034 -1.546 H33 XLL 37 XLL H31 H14 H 0 1 N N N N N N -13.704 8.276 41.986 0.010 3.779 -1.348 H31 XLL 38 XLL H34 H15 H 0 1 N N N N N N -10.766 6.437 41.979 3.746 1.937 0.361 H34 XLL 39 XLL H35 H16 H 0 1 N N N N N N -13.175 4.903 45.894 1.002 -2.094 -0.423 H35 XLL 40 XLL H38 H17 H 0 1 N N N N N N -16.476 9.717 49.138 -5.090 0.024 -2.507 H38 XLL 41 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal XLL C1 C2 SING N N 1 XLL C2 C3 SING N N 2 XLL C2 C4 SING N N 3 XLL C2 C5 SING N N 4 XLL C5 C6 DOUB Y N 5 XLL C5 C13 SING Y N 6 XLL C6 C7 SING Y N 7 XLL C7 CL8 SING N N 8 XLL C7 C9 DOUB Y N 9 XLL C9 C10 SING N N 10 XLL C9 C12 SING Y N 11 XLL C10 N11 TRIP N N 12 XLL C12 C13 DOUB Y N 13 XLL C13 O14 SING N N 14 XLL O14 C15 SING N N 15 XLL C15 C16 SING N N 16 XLL C16 N17 DOUB Y N 17 XLL C16 C24 SING Y N 18 XLL N17 N18 SING Y N 19 XLL N18 C19 SING Y N 20 XLL C19 N20 DOUB Y N 21 XLL C19 C24 SING Y N 22 XLL N20 C21 SING Y N 23 XLL C21 C22 DOUB Y N 24 XLL C22 C23 SING Y N 25 XLL C23 C24 DOUB Y N 26 XLL C15 H37 SING N N 27 XLL C15 H36 SING N N 28 XLL C21 H39 SING N N 29 XLL C22 H40 SING N N 30 XLL C23 H41 SING N N 31 XLL C1 H27 SING N N 32 XLL C1 H25 SING N N 33 XLL C1 H26 SING N N 34 XLL C3 H28 SING N N 35 XLL C3 H29 SING N N 36 XLL C3 H30 SING N N 37 XLL C4 H32 SING N N 38 XLL C4 H33 SING N N 39 XLL C4 H31 SING N N 40 XLL C6 H34 SING N N 41 XLL C12 H35 SING N N 42 XLL N18 H38 SING N N 43 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor XLL SMILES ACDLabs 12.01 "CC(C)(C)c1cc(Cl)c(C#N)cc1OCc1n[NH]c2ncccc21" XLL InChI InChI 1.06 "InChI=1S/C18H17ClN4O/c1-18(2,3)13-8-14(19)11(9-20)7-16(13)24-10-15-12-5-4-6-21-17(12)23-22-15/h4-8H,10H2,1-3H3,(H,21,22,23)" XLL InChIKey InChI 1.06 IGVXALUESOTNEK-UHFFFAOYSA-N XLL SMILES_CANONICAL CACTVS 3.385 "CC(C)(C)c1cc(Cl)c(cc1OCc2n[nH]c3ncccc23)C#N" XLL SMILES CACTVS 3.385 "CC(C)(C)c1cc(Cl)c(cc1OCc2n[nH]c3ncccc23)C#N" XLL SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)(C)c1cc(c(cc1OCc2c3cccnc3[nH]n2)C#N)Cl" XLL SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)(C)c1cc(c(cc1OCc2c3cccnc3[nH]n2)C#N)Cl" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier XLL "SYSTEMATIC NAME" ACDLabs 12.01 "4-tert-butyl-2-chloro-5-[(1H-pyrazolo[3,4-b]pyridin-3-yl)methoxy]benzonitrile" XLL "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "4-~{tert}-butyl-2-chloranyl-5-(1~{H}-pyrazolo[3,4-b]pyridin-3-ylmethoxy)benzenecarbonitrile" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site XLL "Create component" 2023-06-07 RCSB XLL "Initial release" 2024-12-18 RCSB #