data_XLW # _chem_comp.id XLW _chem_comp.name "5-fluoro-2-({[(3M)-3-(pyrimidin-4-yl)pyridin-2-yl]amino}methyl)phenol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C16 H13 F N4 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-11-29 _chem_comp.pdbx_modified_date 2023-12-08 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 296.299 _chem_comp.one_letter_code ? _chem_comp.three_letter_code XLW _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8F96 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal XLW N1 N1 N 0 1 N N N N N N -9.439 -55.876 -25.623 0.310 -0.831 0.142 N1 XLW 1 XLW N3 N2 N 0 1 Y N N N N N -11.621 -53.379 -26.431 1.568 1.623 0.968 N3 XLW 2 XLW C4 C1 C 0 1 Y N N N N N -10.635 -56.605 -23.626 -2.109 -1.032 0.160 C4 XLW 3 XLW C5 C2 C 0 1 Y N N N N N -11.778 -56.452 -22.820 -2.805 -0.868 1.342 C5 XLW 4 XLW C6 C3 C 0 1 Y N N N N N -11.745 -56.715 -21.447 -4.006 -0.183 1.349 C6 XLW 5 XLW C7 C4 C 0 1 N N N N N N -10.783 -56.245 -25.096 -0.803 -1.784 0.154 C7 XLW 6 XLW C8 C5 C 0 1 Y N N N N N -8.797 -54.728 -26.164 1.617 -1.292 0.128 C8 XLW 7 XLW C10 C6 C 0 1 Y N N N N N -6.843 -52.991 -27.240 4.181 -2.234 0.102 C10 XLW 8 XLW C13 C7 C 0 1 Y N N N N N -10.476 -52.733 -26.661 2.416 1.081 0.095 C13 XLW 9 XLW C15 C8 C 0 1 Y N N N N N -11.735 -50.685 -26.973 2.775 3.266 -0.798 C15 XLW 10 XLW C1 C9 C 0 1 Y N N N N N -10.550 -57.138 -20.880 -4.514 0.340 0.171 C1 XLW 11 XLW C2 C10 C 0 1 Y N N N N N -9.386 -57.306 -21.646 -3.819 0.177 -1.014 C2 XLW 12 XLW C3 C11 C 0 1 Y N N N N N -9.416 -57.037 -23.030 -2.614 -0.510 -1.021 C3 XLW 13 XLW F F1 F 0 1 N N N N N N -10.549 -57.398 -19.565 -5.687 1.010 0.180 F XLW 14 XLW O O1 O 0 1 N N N N N N -8.274 -57.204 -23.760 -1.930 -0.670 -2.184 O XLW 15 XLW N2 N3 N 0 1 Y N N N N N -7.504 -55.049 -26.291 1.855 -2.594 0.132 N2 XLW 16 XLW C9 C12 C 0 1 Y N N N N N -6.554 -54.262 -26.787 3.084 -3.075 0.119 C9 XLW 17 XLW C11 C13 C 0 1 Y N N N N N -8.158 -52.566 -27.158 3.988 -0.863 0.092 C11 XLW 18 XLW C12 C14 C 0 1 Y N N N N N -9.164 -53.413 -26.639 2.679 -0.376 0.105 C12 XLW 19 XLW C14 C15 C 0 1 Y N N N N N -12.773 -52.710 -26.475 1.333 2.918 0.961 C14 XLW 20 XLW N4 N4 N 0 1 Y N N N N N -12.840 -51.402 -26.735 1.919 3.728 0.102 N4 XLW 21 XLW C16 C16 C 0 1 Y N N N N N -10.506 -51.338 -26.949 3.055 1.913 -0.831 C16 XLW 22 XLW H1 H1 H 0 1 N N N N N N -9.310 -56.549 -26.352 0.132 0.122 0.139 H1 XLW 23 XLW H2 H2 H 0 1 N N N N N N -12.702 -56.124 -23.272 -2.411 -1.275 2.261 H2 XLW 24 XLW H3 H3 H 0 1 N N N N N N -12.630 -56.592 -20.840 -4.549 -0.056 2.274 H3 XLW 25 XLW H4 H4 H 0 1 N N N N N N -11.472 -55.394 -25.203 -0.751 -2.414 -0.734 H4 XLW 26 XLW H5 H5 H 0 1 N N N N N N -11.177 -57.108 -25.653 -0.738 -2.408 1.045 H5 XLW 27 XLW H6 H6 H 0 1 N N N N N N -6.072 -52.351 -27.644 5.180 -2.643 0.092 H6 XLW 28 XLW H7 H7 H 0 1 N N N N N N -11.796 -49.626 -27.178 3.249 3.939 -1.497 H7 XLW 29 XLW H8 H8 H 0 1 N N N N N N -8.472 -57.640 -21.178 -4.215 0.585 -1.933 H8 XLW 30 XLW H9 H9 H 0 1 N N N N N N -7.572 -57.495 -23.189 -2.164 -1.473 -2.670 H9 XLW 31 XLW H10 H10 H 0 1 N N N N N N -5.538 -54.624 -26.836 3.235 -4.144 0.122 H10 XLW 32 XLW H11 H11 H 0 1 N N N N N N -8.419 -51.574 -27.495 4.829 -0.186 0.078 H11 XLW 33 XLW H12 H12 H 0 1 N N N N N N -13.691 -53.249 -26.293 0.640 3.329 1.681 H12 XLW 34 XLW H13 H13 H 0 1 N N N N N N -9.592 -50.797 -27.145 3.749 1.508 -1.552 H13 XLW 35 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal XLW C10 C11 DOUB Y N 1 XLW C10 C9 SING Y N 2 XLW C11 C12 SING Y N 3 XLW C15 C16 DOUB Y N 4 XLW C15 N4 SING Y N 5 XLW C16 C13 SING Y N 6 XLW C9 N2 DOUB Y N 7 XLW N4 C14 DOUB Y N 8 XLW C13 C12 SING N N 9 XLW C13 N3 DOUB Y N 10 XLW C12 C8 DOUB Y N 11 XLW C14 N3 SING Y N 12 XLW N2 C8 SING Y N 13 XLW C8 N1 SING N N 14 XLW N1 C7 SING N N 15 XLW C7 C4 SING N N 16 XLW O C3 SING N N 17 XLW C4 C3 DOUB Y N 18 XLW C4 C5 SING Y N 19 XLW C3 C2 SING Y N 20 XLW C5 C6 DOUB Y N 21 XLW C2 C1 DOUB Y N 22 XLW C6 C1 SING Y N 23 XLW C1 F SING N N 24 XLW N1 H1 SING N N 25 XLW C5 H2 SING N N 26 XLW C6 H3 SING N N 27 XLW C7 H4 SING N N 28 XLW C7 H5 SING N N 29 XLW C10 H6 SING N N 30 XLW C15 H7 SING N N 31 XLW C2 H8 SING N N 32 XLW O H9 SING N N 33 XLW C9 H10 SING N N 34 XLW C11 H11 SING N N 35 XLW C14 H12 SING N N 36 XLW C16 H13 SING N N 37 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor XLW SMILES ACDLabs 12.01 "Fc1ccc(CNc2ncccc2c2ccncn2)c(O)c1" XLW InChI InChI 1.06 "InChI=1S/C16H13FN4O/c17-12-4-3-11(15(22)8-12)9-20-16-13(2-1-6-19-16)14-5-7-18-10-21-14/h1-8,10,22H,9H2,(H,19,20)" XLW InChIKey InChI 1.06 GEXFOIODJDMVND-UHFFFAOYSA-N XLW SMILES_CANONICAL CACTVS 3.385 "Oc1cc(F)ccc1CNc2ncccc2c3ccncn3" XLW SMILES CACTVS 3.385 "Oc1cc(F)ccc1CNc2ncccc2c3ccncn3" XLW SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(c(nc1)NCc2ccc(cc2O)F)c3ccncn3" XLW SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(c(nc1)NCc2ccc(cc2O)F)c3ccncn3" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier XLW "SYSTEMATIC NAME" ACDLabs 12.01 "5-fluoro-2-({[(3M)-3-(pyrimidin-4-yl)pyridin-2-yl]amino}methyl)phenol" XLW "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "5-fluoranyl-2-[[(3-pyrimidin-4-ylpyridin-2-yl)amino]methyl]phenol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site XLW "Create component" 2022-11-29 RCSB XLW "Initial release" 2023-12-13 RCSB #