data_XLY # _chem_comp.id XLY _chem_comp.name "(3R)-3-methyl-1,2,3,4-tetrahydro-5H-1,4-benzodiazepin-5-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C10 H12 N2 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-12-18 _chem_comp.pdbx_modified_date 2021-01-08 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 176.215 _chem_comp.one_letter_code ? _chem_comp.three_letter_code XLY _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5S8Q _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal XLY N1 N1 N 0 1 N N N -9.494 -7.807 96.879 2.046 0.617 0.073 N1 XLY 1 XLY C4 C1 C 0 1 Y N N -5.840 -4.989 96.250 -1.811 -1.284 -0.506 C4 XLY 2 XLY C5 C2 C 0 1 Y N N -6.087 -3.701 96.660 -2.864 -0.594 0.062 C5 XLY 3 XLY C6 C3 C 0 1 Y N N -7.487 -3.253 97.051 -2.687 0.698 0.532 C6 XLY 4 XLY C7 C4 C 0 1 Y N N -8.453 -4.131 97.007 -1.460 1.318 0.428 C7 XLY 5 XLY C8 C5 C 0 1 Y N N -8.268 -5.553 96.593 -0.391 0.638 -0.152 C8 XLY 6 XLY O O1 O 0 1 N N N -10.696 -5.918 96.314 1.010 2.394 -0.784 O XLY 7 XLY C9 C6 C 0 1 N N N -9.564 -6.403 96.586 0.927 1.277 -0.310 C9 XLY 8 XLY C1 C7 C 0 1 N N S -8.249 -8.530 97.122 1.943 -0.672 0.756 C1 XLY 9 XLY C C8 C 0 1 N N N -8.560 -9.957 97.506 0.851 -0.591 1.825 C XLY 10 XLY C3 C9 C 0 1 Y N N -6.943 -5.997 96.189 -0.567 -0.682 -0.607 C3 XLY 11 XLY N N2 N 0 1 N N N -6.656 -7.269 95.640 0.531 -1.364 -1.138 N XLY 12 XLY C2 C10 C 0 1 N N N -7.376 -8.540 95.829 1.598 -1.782 -0.231 C2 XLY 13 XLY H11 H1 H 0 1 N N N -10.351 -8.321 96.919 2.918 0.999 -0.110 H11 XLY 14 XLY H7 H2 H 0 1 N N N -4.838 -5.277 95.969 -1.956 -2.290 -0.871 H7 XLY 15 XLY H8 H3 H 0 1 N N N -5.272 -2.994 96.705 -3.833 -1.065 0.140 H8 XLY 16 XLY H9 H4 H 0 1 N N N -7.677 -2.235 97.357 -3.517 1.222 0.984 H9 XLY 17 XLY H10 H5 H 0 1 N N N -9.445 -3.809 97.287 -1.328 2.326 0.793 H10 XLY 18 XLY H3 H6 H 0 1 N N N -7.681 -8.047 97.931 2.896 -0.902 1.234 H3 XLY 19 XLY H H7 H 0 1 N N N -9.176 -9.966 98.417 0.999 -1.386 2.556 H XLY 20 XLY H2 H8 H 0 1 N N N -9.109 -10.445 96.688 0.904 0.377 2.324 H2 XLY 21 XLY H1 H9 H 0 1 N N N -7.621 -10.499 97.693 -0.126 -0.705 1.355 H1 XLY 22 XLY H6 H10 H 0 1 N N N -5.722 -7.465 95.939 0.581 -1.555 -2.087 H6 XLY 23 XLY H4 H11 H 0 1 N N N -6.642 -9.356 95.902 2.485 -2.032 -0.813 H4 XLY 24 XLY H5 H12 H 0 1 N N N -8.029 -8.711 94.961 1.273 -2.664 0.321 H5 XLY 25 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal XLY C C1 SING N N 1 XLY C1 C2 SING N N 2 XLY C2 N SING N N 3 XLY N C3 SING N N 4 XLY C3 C4 DOUB Y N 5 XLY C4 C5 SING Y N 6 XLY C5 C6 DOUB Y N 7 XLY C6 C7 SING Y N 8 XLY C7 C8 DOUB Y N 9 XLY C3 C8 SING Y N 10 XLY C8 C9 SING N N 11 XLY N1 C9 SING N N 12 XLY C1 N1 SING N N 13 XLY C9 O DOUB N N 14 XLY N1 H11 SING N N 15 XLY C4 H7 SING N N 16 XLY C5 H8 SING N N 17 XLY C6 H9 SING N N 18 XLY C7 H10 SING N N 19 XLY C1 H3 SING N N 20 XLY C H SING N N 21 XLY C H2 SING N N 22 XLY C H1 SING N N 23 XLY N H6 SING N N 24 XLY C2 H4 SING N N 25 XLY C2 H5 SING N N 26 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor XLY SMILES ACDLabs 12.01 "N2C(c1ccccc1NCC2C)=O" XLY InChI InChI 1.03 "InChI=1S/C10H12N2O/c1-7-6-11-9-5-3-2-4-8(9)10(13)12-7/h2-5,7,11H,6H2,1H3,(H,12,13)" XLY InChIKey InChI 1.03 XOMCUECONFZUOE-UHFFFAOYSA-N XLY SMILES_CANONICAL CACTVS 3.385 "C[C@H]1CNc2ccccc2C(=O)N1" XLY SMILES CACTVS 3.385 "C[CH]1CNc2ccccc2C(=O)N1" XLY SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@H]1CNc2ccccc2C(=O)N1" XLY SMILES "OpenEye OEToolkits" 2.0.7 "CC1CNc2ccccc2C(=O)N1" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier XLY "SYSTEMATIC NAME" ACDLabs 12.01 "(3R)-3-methyl-1,2,3,4-tetrahydro-5H-1,4-benzodiazepin-5-one" XLY "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(3~{S})-3-methyl-1,2,3,4-tetrahydro-1,4-benzodiazepin-5-one" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site XLY "Create component" 2020-12-18 RCSB XLY "Initial release" 2021-01-13 RCSB ##