data_XM3 # _chem_comp.id XM3 _chem_comp.name "N-(3-{(1R)-1-[(4-methyl-4H-1,2,4-triazol-3-yl)sulfanyl]ethyl}phenyl)benzamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C18 H18 N4 O S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-11-03 _chem_comp.pdbx_modified_date 2026-08-28 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 338.427 _chem_comp.one_letter_code ? _chem_comp.three_letter_code XM3 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8UTZ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal XM3 C14 C1 C 0 1 Y N N N N N -20.526 -12.384 9.771 -4.554 0.630 0.012 C14 XM3 1 XM3 C11 C2 C 0 1 Y N N N N N -17.873 -14.995 8.702 -1.572 -1.620 0.051 C11 XM3 2 XM3 C10 C3 C 0 1 Y N N N N N -17.116 -16.440 6.657 0.756 -1.261 -0.400 C10 XM3 3 XM3 C13 C4 C 0 1 Y N N N N N -18.000 -15.345 7.230 -0.509 -0.754 -0.176 C13 XM3 4 XM3 C01 C5 C 0 1 Y N N N N N -15.507 -14.492 4.684 4.296 0.715 0.201 C01 XM3 5 XM3 C06 C6 C 0 1 N N N N N N -19.902 -13.418 8.849 -3.247 0.027 -0.323 C06 XM3 6 XM3 C07 C7 C 0 1 Y N N N N N -15.059 -12.472 5.290 5.998 2.074 0.154 C07 XM3 7 XM3 C09 C8 C 0 1 N N S N N N -17.155 -16.823 5.187 1.910 -0.323 -0.645 C09 XM3 8 XM3 C15 C9 C 0 1 N N N N N N -13.810 -14.249 6.489 6.038 0.337 2.003 C15 XM3 9 XM3 C16 C10 C 0 1 Y N N N N N -16.108 -17.161 7.541 0.965 -2.628 -0.399 C16 XM3 10 XM3 C17 C11 C 0 1 Y N N N N N -15.985 -16.808 9.022 -0.091 -3.492 -0.173 C17 XM3 11 XM3 C18 C12 C 0 1 Y N N N N N -16.875 -15.717 9.599 -1.359 -2.992 0.052 C18 XM3 12 XM3 C19 C13 C 0 1 N N N N N N -17.337 -18.328 5.029 2.512 -0.606 -2.023 C19 XM3 13 XM3 C20 C14 C 0 1 Y N N N N N -19.876 -12.159 11.135 -4.965 1.807 -0.616 C20 XM3 14 XM3 C21 C15 C 0 1 Y N N N N N -21.759 -11.592 9.367 -5.386 0.021 0.952 C21 XM3 15 XM3 C22 C16 C 0 1 Y N N N N N -22.338 -10.570 10.339 -6.608 0.585 1.256 C22 XM3 16 XM3 C23 C17 C 0 1 Y N N N N N -20.458 -11.137 12.108 -6.189 2.361 -0.303 C23 XM3 17 XM3 C24 C18 C 0 1 Y N N N N N -21.696 -10.343 11.706 -7.009 1.752 0.630 C24 XM3 18 XM3 N02 N1 N 0 1 Y N N N N N -14.765 -13.754 5.514 5.468 1.013 0.835 N02 XM3 19 XM3 N03 N2 N 0 1 Y N N N N N -16.248 -13.676 3.968 4.168 1.565 -0.791 N03 XM3 20 XM3 N04 N3 N 0 1 Y N N N N N -15.969 -12.416 4.341 5.175 2.364 -0.813 N04 XM3 21 XM3 N08 N4 N 0 1 N N N N N N -18.673 -13.986 9.349 -2.853 -1.109 0.285 N08 XM3 22 XM3 O12 O1 O 0 1 N N N N N N -20.399 -13.736 7.817 -2.526 0.557 -1.146 O12 XM3 23 XM3 S05 S1 S 0 1 N N N N N N -15.527 -16.302 4.552 3.171 -0.573 0.628 S05 XM3 24 XM3 H131 H1 H 0 0 N N N N N N -18.707 -14.824 6.601 -0.672 0.313 -0.177 H131 XM3 25 XM3 H071 H2 H 0 0 N N N N N N -14.624 -11.625 5.800 6.927 2.578 0.377 H071 XM3 26 XM3 H091 H3 H 0 0 N N N N N N -17.927 -16.262 4.641 1.555 0.707 -0.609 H091 XM3 27 XM3 H153 H4 H 0 0 N N N N N N -13.356 -13.401 7.022 6.680 -0.479 1.673 H153 XM3 28 XM3 H152 H5 H 0 0 N N N N N N -14.326 -14.901 7.209 6.625 1.049 2.584 H152 XM3 29 XM3 H151 H6 H 0 0 N N N N N N -13.024 -14.821 5.974 5.234 -0.061 2.622 H151 XM3 30 XM3 H161 H7 H 0 0 N N N N N N -15.475 -17.927 7.118 1.955 -3.022 -0.574 H161 XM3 31 XM3 H171 H8 H 0 0 N N N N N N -15.276 -17.326 9.651 0.076 -4.559 -0.173 H171 XM3 32 XM3 H181 H9 H 0 0 N N N N N N -16.799 -15.454 10.644 -2.183 -3.667 0.228 H181 XM3 33 XM3 H191 H10 H 0 0 N N N N N N -18.323 -18.621 5.417 2.867 -1.636 -2.060 H191 XM3 34 XM3 H192 H11 H 0 0 N N N N N N -17.268 -18.596 3.964 1.753 -0.456 -2.790 H192 XM3 35 XM3 H193 H12 H 0 0 N N N N N N -16.551 -18.853 5.591 3.347 0.072 -2.201 H193 XM3 36 XM3 H201 H13 H 0 0 N N N N N N -19.000 -12.726 11.412 -4.326 2.283 -1.344 H201 XM3 37 XM3 H211 H14 H 0 0 N N N N N N -22.219 -11.751 8.403 -5.075 -0.891 1.441 H211 XM3 38 XM3 H221 H15 H 0 0 N N N N N N -23.211 -10.000 10.058 -7.253 0.115 1.983 H221 XM3 39 XM3 H231 H16 H 0 0 N N N N N N -19.997 -10.978 13.072 -6.508 3.272 -0.788 H231 XM3 40 XM3 H241 H17 H 0 0 N N N N N N -22.119 -9.620 12.388 -7.967 2.189 0.871 H241 XM3 41 XM3 H081 H18 H 0 0 N N N N N N -18.345 -13.646 10.230 -3.458 -1.574 0.883 H081 XM3 42 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal XM3 C01 N02 SING Y N 1 XM3 C01 N03 DOUB Y N 2 XM3 C01 S05 SING N N 3 XM3 N02 C07 SING Y N 4 XM3 N02 C15 SING N N 5 XM3 N03 N04 SING Y N 6 XM3 N04 C07 DOUB Y N 7 XM3 S05 C09 SING N N 8 XM3 C06 N08 SING N N 9 XM3 C06 O12 DOUB N N 10 XM3 C06 C14 SING N N 11 XM3 N08 C11 SING N N 12 XM3 C09 C10 SING N N 13 XM3 C09 C19 SING N N 14 XM3 C10 C13 DOUB Y N 15 XM3 C10 C16 SING Y N 16 XM3 C11 C13 SING Y N 17 XM3 C11 C18 DOUB Y N 18 XM3 C14 C20 DOUB Y N 19 XM3 C14 C21 SING Y N 20 XM3 C16 C17 DOUB Y N 21 XM3 C17 C18 SING Y N 22 XM3 C20 C23 SING Y N 23 XM3 C21 C22 DOUB Y N 24 XM3 C22 C24 SING Y N 25 XM3 C23 C24 DOUB Y N 26 XM3 C13 H131 SING N N 27 XM3 C07 H071 SING N N 28 XM3 C09 H091 SING N N 29 XM3 C15 H153 SING N N 30 XM3 C15 H152 SING N N 31 XM3 C15 H151 SING N N 32 XM3 C16 H161 SING N N 33 XM3 C17 H171 SING N N 34 XM3 C18 H181 SING N N 35 XM3 C19 H191 SING N N 36 XM3 C19 H192 SING N N 37 XM3 C19 H193 SING N N 38 XM3 C20 H201 SING N N 39 XM3 C21 H211 SING N N 40 XM3 C22 H221 SING N N 41 XM3 C23 H231 SING N N 42 XM3 C24 H241 SING N N 43 XM3 N08 H081 SING N N 44 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor XM3 SMILES ACDLabs 12.01 "CC(Sc1nncn1C)c1cccc(NC(=O)c2ccccc2)c1" XM3 InChI InChI 1.06 "InChI=1S/C18H18N4OS/c1-13(24-18-21-19-12-22(18)2)15-9-6-10-16(11-15)20-17(23)14-7-4-3-5-8-14/h3-13H,1-2H3,(H,20,23)/t13-/m0/s1" XM3 InChIKey InChI 1.06 BTJHNHKMMJBRLF-ZDUSSCGKSA-N XM3 SMILES_CANONICAL CACTVS 3.385 "C[C@H](Sc1nncn1C)c2cccc(NC(=O)c3ccccc3)c2" XM3 SMILES CACTVS 3.385 "C[CH](Sc1nncn1C)c2cccc(NC(=O)c3ccccc3)c2" XM3 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@@H](c1cccc(c1)NC(=O)c2ccccc2)Sc3nncn3C" XM3 SMILES "OpenEye OEToolkits" 2.0.7 "CC(c1cccc(c1)NC(=O)c2ccccc2)Sc3nncn3C" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier XM3 "SYSTEMATIC NAME" ACDLabs 12.01 "N-(3-{(1R)-1-[(4-methyl-4H-1,2,4-triazol-3-yl)sulfanyl]ethyl}phenyl)benzamide" XM3 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "~{N}-[3-[(1~{S})-1-[(4-methyl-1,2,4-triazol-3-yl)sulfanyl]ethyl]phenyl]benzamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site XM3 "Create component" 2023-11-03 RCSB XM3 "Initial release" 2026-09-02 RCSB #