data_XM6 # _chem_comp.id XM6 _chem_comp.name "2-({[(2M)-[2,3'-bipyridin]-2'-yl]amino}methyl)-5-fluorophenol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C17 H14 F N3 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-11-29 _chem_comp.pdbx_modified_date 2023-12-08 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 295.311 _chem_comp.one_letter_code ? _chem_comp.three_letter_code XM6 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8F97 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal XM6 N1 N1 N 0 1 Y N N N N N -8.189 -53.149 -27.416 1.869 2.569 -0.147 N1 XM6 1 XM6 N3 N2 N 0 1 Y N N N N N -11.913 -51.075 -26.988 1.548 -1.634 -0.919 N3 XM6 2 XM6 C4 C1 C 0 1 Y N N N N N -10.436 -54.453 -26.382 3.998 0.834 -0.107 C4 XM6 3 XM6 C5 C2 C 0 1 Y N N N N N -10.549 -53.138 -26.896 2.689 0.350 -0.101 C5 XM6 4 XM6 C6 C3 C 0 1 Y N N N N N -11.874 -52.422 -26.881 2.424 -1.107 -0.072 C6 XM6 5 XM6 C7 C4 C 0 1 N N N N N N -8.271 -50.439 -28.290 -0.789 1.757 -0.255 C7 XM6 6 XM6 C8 C5 C 0 1 Y N N N N N -8.123 -50.303 -29.798 -2.097 1.009 -0.219 C8 XM6 7 XM6 C10 C6 C 0 1 Y N N N N N -8.729 -49.147 -31.812 -3.963 0.040 -1.364 C10 XM6 8 XM6 C13 C7 C 0 1 Y N N N N N -7.330 -51.202 -30.560 -2.634 0.610 0.996 C13 XM6 9 XM6 C15 C8 C 0 1 Y N N N N N -14.278 -51.092 -26.865 1.914 -3.783 -0.043 C15 XM6 10 XM6 C17 C9 C 0 1 Y N N N N N -13.085 -53.163 -26.762 3.095 -1.914 0.845 C17 XM6 11 XM6 C1 C10 C 0 1 Y N N N N N -9.376 -52.502 -27.415 1.629 1.268 -0.122 C1 XM6 12 XM6 C2 C11 C 0 1 Y N N N N N -8.093 -54.400 -26.935 3.099 3.048 -0.153 C2 XM6 13 XM6 C3 C12 C 0 1 Y N N N N N -9.198 -55.099 -26.413 4.194 2.205 -0.133 C3 XM6 14 XM6 N2 N3 N 0 1 N N N N N N -9.483 -51.187 -27.921 0.320 0.810 -0.117 N2 XM6 15 XM6 C9 C13 C 0 1 Y N N N N N -8.833 -49.288 -30.424 -2.763 0.725 -1.395 C9 XM6 16 XM6 C11 C14 C 0 1 Y N N N N N -7.910 -50.049 -32.526 -4.500 -0.365 -0.153 C11 XM6 17 XM6 C12 C15 C 0 1 Y N N N N N -7.204 -51.077 -31.923 -3.838 -0.078 1.028 C12 XM6 18 XM6 F F1 F 0 1 N N N N N N -7.752 -49.950 -33.832 -5.673 -1.035 -0.124 F XM6 19 XM6 O O1 O 0 1 N N N N N N -6.630 -52.199 -30.014 -1.982 0.893 2.155 O XM6 20 XM6 C14 C16 C 0 1 Y N N N N N -13.064 -50.410 -26.987 1.284 -2.925 -0.925 C14 XM6 21 XM6 C16 C17 C 0 1 Y N N N N N -14.311 -52.496 -26.746 2.837 -3.274 0.860 C16 XM6 22 XM6 H1 H1 H 0 1 N N N N N N -11.300 -54.952 -25.969 4.838 0.155 -0.092 H1 XM6 23 XM6 H2 H2 H 0 1 N N N N N N -7.392 -50.968 -27.893 -0.699 2.286 -1.204 H2 XM6 24 XM6 H3 H3 H 0 1 N N N N N N -8.325 -49.434 -27.846 -0.758 2.474 0.565 H3 XM6 25 XM6 H4 H4 H 0 1 N N N N N N -9.265 -48.364 -32.327 -4.482 -0.181 -2.285 H4 XM6 26 XM6 H5 H5 H 0 1 N N N N N N -15.204 -50.535 -26.862 1.690 -4.839 -0.056 H5 XM6 27 XM6 H6 H6 H 0 1 N N N N N N -13.054 -54.240 -26.684 3.808 -1.485 1.533 H6 XM6 28 XM6 H7 H7 H 0 1 N N N N N N -7.130 -54.889 -26.949 3.253 4.117 -0.173 H7 XM6 29 XM6 H8 H8 H 0 1 N N N N N N -9.091 -56.109 -26.046 5.194 2.612 -0.138 H8 XM6 30 XM6 H9 H9 H 0 1 N N N N N N -9.954 -50.647 -27.224 0.139 -0.139 -0.022 H9 XM6 31 XM6 H10 H10 H 0 1 N N N N N N -9.455 -48.618 -29.849 -2.346 1.039 -2.341 H10 XM6 32 XM6 H11 H11 H 0 1 N N N N N N -6.583 -51.749 -32.497 -4.256 -0.393 1.972 H11 XM6 33 XM6 H12 H12 H 0 1 N N N N N N -6.775 -52.211 -29.075 -2.229 1.741 2.548 H12 XM6 34 XM6 H13 H13 H 0 1 N N N N N N -13.061 -49.334 -27.081 0.565 -3.318 -1.629 H13 XM6 35 XM6 H14 H14 H 0 1 N N N N N N -15.243 -53.032 -26.647 3.342 -3.924 1.559 H14 XM6 36 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal XM6 F C11 SING N N 1 XM6 C11 C12 DOUB Y N 2 XM6 C11 C10 SING Y N 3 XM6 C12 C13 SING Y N 4 XM6 C10 C9 DOUB Y N 5 XM6 C13 O SING N N 6 XM6 C13 C8 DOUB Y N 7 XM6 C9 C8 SING Y N 8 XM6 C8 C7 SING N N 9 XM6 C7 N2 SING N N 10 XM6 N2 C1 SING N N 11 XM6 N1 C1 DOUB Y N 12 XM6 N1 C2 SING Y N 13 XM6 C1 C5 SING Y N 14 XM6 N3 C14 DOUB Y N 15 XM6 N3 C6 SING Y N 16 XM6 C14 C15 SING Y N 17 XM6 C2 C3 DOUB Y N 18 XM6 C5 C6 SING N N 19 XM6 C5 C4 DOUB Y N 20 XM6 C6 C17 DOUB Y N 21 XM6 C15 C16 DOUB Y N 22 XM6 C17 C16 SING Y N 23 XM6 C3 C4 SING Y N 24 XM6 C4 H1 SING N N 25 XM6 C7 H2 SING N N 26 XM6 C7 H3 SING N N 27 XM6 C10 H4 SING N N 28 XM6 C15 H5 SING N N 29 XM6 C17 H6 SING N N 30 XM6 C2 H7 SING N N 31 XM6 C3 H8 SING N N 32 XM6 N2 H9 SING N N 33 XM6 C9 H10 SING N N 34 XM6 C12 H11 SING N N 35 XM6 O H12 SING N N 36 XM6 C14 H13 SING N N 37 XM6 C16 H14 SING N N 38 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor XM6 SMILES ACDLabs 12.01 "Fc1ccc(CNc2ncccc2c2ccccn2)c(O)c1" XM6 InChI InChI 1.06 "InChI=1S/C17H14FN3O/c18-13-7-6-12(16(22)10-13)11-21-17-14(4-3-9-20-17)15-5-1-2-8-19-15/h1-10,22H,11H2,(H,20,21)" XM6 InChIKey InChI 1.06 FIQJLLWADQSRDK-UHFFFAOYSA-N XM6 SMILES_CANONICAL CACTVS 3.385 "Oc1cc(F)ccc1CNc2ncccc2c3ccccn3" XM6 SMILES CACTVS 3.385 "Oc1cc(F)ccc1CNc2ncccc2c3ccccn3" XM6 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccnc(c1)c2cccnc2NCc3ccc(cc3O)F" XM6 SMILES "OpenEye OEToolkits" 2.0.7 "c1ccnc(c1)c2cccnc2NCc3ccc(cc3O)F" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier XM6 "SYSTEMATIC NAME" ACDLabs 12.01 "2-({[(2M)-[2,3'-bipyridin]-2'-yl]amino}methyl)-5-fluorophenol" XM6 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "5-fluoranyl-2-[[(3-pyridin-2-ylpyridin-2-yl)amino]methyl]phenol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site XM6 "Create component" 2022-11-29 RCSB XM6 "Initial release" 2023-12-13 RCSB #