data_XN4 # _chem_comp.id XN4 _chem_comp.name "(5S)-5-butyl-4-({1-[(4-chlorophenyl)methyl]-1H-imidazol-5-yl}methyl)-1-[3-(trifluoromethoxy)phenyl]piperazin-2-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C26 H28 Cl F3 N4 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-12-21 _chem_comp.pdbx_modified_date 2022-11-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 520.974 _chem_comp.one_letter_code ? _chem_comp.three_letter_code XN4 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7L46 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal XN4 C10 C1 C 0 1 Y N N 29.913 -38.510 -6.159 5.188 -1.836 0.001 C10 XN4 1 XN4 C21 C2 C 0 1 N N N 34.641 -36.087 -2.981 -0.297 -3.075 1.329 C21 XN4 2 XN4 C24 C3 C 0 1 Y N N 36.336 -33.241 -4.442 -2.535 -1.093 1.544 C24 XN4 3 XN4 C01 C4 C 0 1 N N N 37.484 -38.558 -8.446 -4.683 -4.386 -3.287 C01 XN4 4 XN4 C02 C5 C 0 1 N N N 36.841 -38.793 -7.048 -3.544 -3.365 -3.344 C02 XN4 5 XN4 C03 C6 C 0 1 N N N 35.723 -37.769 -6.724 -2.622 -3.562 -2.138 C03 XN4 6 XN4 C04 C7 C 0 1 N N N 35.812 -37.183 -5.287 -1.484 -2.542 -2.195 C04 XN4 7 XN4 C05 C8 C 0 1 N N S 35.031 -35.822 -5.229 -0.495 -2.816 -1.061 C05 XN4 8 XN4 C06 C9 C 0 1 N N N 33.686 -36.227 -5.702 0.683 -1.852 -1.163 C06 XN4 9 XN4 C08 C10 C 0 1 Y N N 31.387 -36.980 -5.024 2.819 -1.450 -0.016 C08 XN4 10 XN4 C09 C11 C 0 1 Y N N 31.224 -38.114 -5.786 3.897 -2.324 0.051 C09 XN4 11 XN4 C11 C12 C 0 1 Y N N 28.822 -37.776 -5.765 5.411 -0.477 -0.117 C11 XN4 12 XN4 C12 C13 C 0 1 Y N N 28.971 -36.638 -5.003 4.338 0.401 -0.184 C12 XN4 13 XN4 C14 C14 C 0 1 N N N 26.541 -36.242 -4.977 5.921 2.168 -0.344 C14 XN4 14 XN4 C18 C15 C 0 1 Y N N 30.292 -36.240 -4.639 3.041 -0.086 -0.133 C18 XN4 15 XN4 C19 C16 C 0 1 N N N 33.160 -36.575 -3.228 1.076 -2.483 1.180 C19 XN4 16 XN4 C23 C17 C 0 1 N N N 36.037 -34.501 -3.585 -1.539 -1.205 0.418 C23 XN4 17 XN4 C25 C18 C 0 1 Y N N 37.045 -33.212 -5.633 -3.379 -2.053 1.967 C25 XN4 18 XN4 C27 C19 C 0 1 Y N N 36.459 -31.220 -5.173 -3.720 -0.327 3.217 C27 XN4 19 XN4 C29 C20 C 0 1 N N N 35.211 -31.457 -3.007 -2.055 1.288 2.250 C29 XN4 20 XN4 C30 C21 C 0 1 Y N N 33.684 -31.807 -2.969 -2.724 2.153 1.214 C30 XN4 21 XN4 C31 C22 C 0 1 Y N N 32.833 -31.475 -4.026 -2.327 2.080 -0.108 C31 XN4 22 XN4 C32 C23 C 0 1 Y N N 31.471 -31.790 -3.983 -2.941 2.873 -1.060 C32 XN4 23 XN4 C33 C24 C 0 1 Y N N 30.955 -32.433 -2.860 -3.953 3.740 -0.688 C33 XN4 24 XN4 C35 C25 C 0 1 Y N N 31.786 -32.749 -1.780 -4.351 3.812 0.635 C35 XN4 25 XN4 C36 C26 C 0 1 Y N N 33.143 -32.431 -1.845 -3.740 3.015 1.584 C36 XN4 26 XN4 F15 F1 F 0 1 N N N 26.377 -36.331 -6.344 5.966 3.561 -0.463 F15 XN4 27 XN4 F16 F2 F 0 1 N N N 25.681 -35.294 -4.539 6.558 1.586 -1.446 F16 XN4 28 XN4 F17 F3 F 0 1 N N N 26.214 -37.454 -4.400 6.573 1.778 0.831 F17 XN4 29 XN4 N07 N1 N 0 1 N N N 32.707 -36.588 -4.658 1.511 -1.945 0.035 N07 XN4 30 XN4 N22 N2 N 0 1 N N N 34.991 -35.214 -3.942 -1.162 -2.613 0.235 N22 XN4 31 XN4 N26 N3 N 0 1 Y N N 37.125 -31.966 -6.074 -4.091 -1.558 2.990 N26 XN4 32 XN4 N28 N4 N 0 1 Y N N 35.974 -31.959 -4.190 -2.750 0.002 2.337 N28 XN4 33 XN4 O13 O1 O 0 1 N N N 27.855 -35.863 -4.589 4.559 1.737 -0.299 O13 XN4 34 XN4 O20 O2 O 0 1 N N N 32.428 -36.839 -2.325 1.820 -2.492 2.137 O20 XN4 35 XN4 CL34 CL1 CL 0 0 N N N 29.203 -32.859 -2.809 -4.725 4.736 -1.883 CL34 XN4 36 XN4 H1 H1 H 0 1 N N N 29.773 -39.397 -6.759 6.024 -2.516 0.057 H1 XN4 37 XN4 H2 H2 H 0 1 N N N 35.321 -36.951 -3.005 -0.227 -4.162 1.300 H2 XN4 38 XN4 H3 H3 H 0 1 N N N 34.707 -35.597 -1.999 -0.723 -2.765 2.283 H3 XN4 39 XN4 H4 H4 H 0 1 N N N 38.267 -39.310 -8.621 -5.339 -4.246 -4.146 H4 XN4 40 XN4 H5 H5 H 0 1 N N N 36.711 -38.645 -9.224 -4.269 -5.394 -3.306 H5 XN4 41 XN4 H6 H6 H 0 1 N N N 37.928 -37.552 -8.481 -5.252 -4.244 -2.368 H6 XN4 42 XN4 H7 H7 H 0 1 N N N 36.409 -39.804 -7.025 -2.975 -3.507 -4.263 H7 XN4 43 XN4 H8 H8 H 0 1 N N N 37.626 -38.712 -6.282 -3.958 -2.357 -3.325 H8 XN4 44 XN4 H9 H9 H 0 1 N N N 35.793 -36.939 -7.443 -3.191 -3.420 -1.219 H9 XN4 45 XN4 H10 H10 H 0 1 N N N 34.750 -38.270 -6.835 -2.208 -4.570 -2.158 H10 XN4 46 XN4 H11 H11 H 0 1 N N N 35.367 -37.892 -4.573 -0.970 -2.624 -3.153 H11 XN4 47 XN4 H12 H12 H 0 1 N N N 36.867 -37.012 -5.025 -1.891 -1.536 -2.087 H12 XN4 48 XN4 H13 H13 H 0 1 N N N 35.483 -35.135 -5.959 -0.136 -3.843 -1.130 H13 XN4 49 XN4 H14 H14 H 0 1 N N N 33.267 -35.389 -6.279 1.284 -2.106 -2.037 H14 XN4 50 XN4 H15 H15 H 0 1 N N N 33.811 -37.099 -6.360 0.308 -0.833 -1.268 H15 XN4 51 XN4 H16 H16 H 0 1 N N N 32.081 -38.694 -6.096 3.725 -3.387 0.142 H16 XN4 52 XN4 H17 H17 H 0 1 N N N 27.832 -38.095 -6.057 6.421 -0.098 -0.156 H17 XN4 53 XN4 H18 H18 H 0 1 N N N 30.435 -35.344 -4.052 2.205 0.596 -0.185 H18 XN4 54 XN4 H19 H19 H 0 1 N N N 36.920 -35.155 -3.631 -1.986 -0.826 -0.501 H19 XN4 55 XN4 H20 H20 H 0 1 N N N 35.879 -34.171 -2.548 -0.651 -0.619 0.658 H20 XN4 56 XN4 H21 H21 H 0 1 N N N 37.468 -34.075 -6.126 -3.468 -3.047 1.554 H21 XN4 57 XN4 H22 H22 H 0 1 N N N 36.336 -30.149 -5.244 -4.121 0.320 3.983 H22 XN4 58 XN4 H23 H23 H 0 1 N N N 35.675 -31.881 -2.104 -1.015 1.121 1.967 H23 XN4 59 XN4 H24 H24 H 0 1 N N N 35.305 -30.361 -2.988 -2.092 1.787 3.219 H24 XN4 60 XN4 H25 H25 H 0 1 N N N 33.233 -30.967 -4.891 -1.536 1.403 -0.398 H25 XN4 61 XN4 H26 H26 H 0 1 N N N 30.826 -31.537 -4.812 -2.630 2.816 -2.092 H26 XN4 62 XN4 H27 H27 H 0 1 N N N 31.381 -33.234 -0.904 -5.141 4.489 0.925 H27 XN4 63 XN4 H28 H28 H 0 1 N N N 33.785 -32.672 -1.011 -4.053 3.068 2.616 H28 XN4 64 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal XN4 C01 C02 SING N N 1 XN4 C02 C03 SING N N 2 XN4 C03 C04 SING N N 3 XN4 F15 C14 SING N N 4 XN4 C10 C09 DOUB Y N 5 XN4 C10 C11 SING Y N 6 XN4 N26 C25 SING Y N 7 XN4 N26 C27 DOUB Y N 8 XN4 C09 C08 SING Y N 9 XN4 C11 C12 DOUB Y N 10 XN4 C06 C05 SING N N 11 XN4 C06 N07 SING N N 12 XN4 C25 C24 DOUB Y N 13 XN4 C04 C05 SING N N 14 XN4 C05 N22 SING N N 15 XN4 C27 N28 SING Y N 16 XN4 C08 N07 SING N N 17 XN4 C08 C18 DOUB Y N 18 XN4 C12 C18 SING Y N 19 XN4 C12 O13 SING N N 20 XN4 C14 O13 SING N N 21 XN4 C14 F16 SING N N 22 XN4 C14 F17 SING N N 23 XN4 N07 C19 SING N N 24 XN4 C24 N28 SING Y N 25 XN4 C24 C23 SING N N 26 XN4 N28 C29 SING N N 27 XN4 C31 C32 DOUB Y N 28 XN4 C31 C30 SING Y N 29 XN4 C32 C33 SING Y N 30 XN4 N22 C23 SING N N 31 XN4 N22 C21 SING N N 32 XN4 C19 C21 SING N N 33 XN4 C19 O20 DOUB N N 34 XN4 C29 C30 SING N N 35 XN4 C30 C36 DOUB Y N 36 XN4 C33 CL34 SING N N 37 XN4 C33 C35 DOUB Y N 38 XN4 C36 C35 SING Y N 39 XN4 C10 H1 SING N N 40 XN4 C21 H2 SING N N 41 XN4 C21 H3 SING N N 42 XN4 C01 H4 SING N N 43 XN4 C01 H5 SING N N 44 XN4 C01 H6 SING N N 45 XN4 C02 H7 SING N N 46 XN4 C02 H8 SING N N 47 XN4 C03 H9 SING N N 48 XN4 C03 H10 SING N N 49 XN4 C04 H11 SING N N 50 XN4 C04 H12 SING N N 51 XN4 C05 H13 SING N N 52 XN4 C06 H14 SING N N 53 XN4 C06 H15 SING N N 54 XN4 C09 H16 SING N N 55 XN4 C11 H17 SING N N 56 XN4 C18 H18 SING N N 57 XN4 C23 H19 SING N N 58 XN4 C23 H20 SING N N 59 XN4 C25 H21 SING N N 60 XN4 C27 H22 SING N N 61 XN4 C29 H23 SING N N 62 XN4 C29 H24 SING N N 63 XN4 C31 H25 SING N N 64 XN4 C32 H26 SING N N 65 XN4 C35 H27 SING N N 66 XN4 C36 H28 SING N N 67 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor XN4 SMILES ACDLabs 12.01 "c4cc(N1CC(CCCC)N(CC1=O)Cc2n(cnc2)Cc3ccc(cc3)Cl)cc(c4)OC(F)(F)F" XN4 InChI InChI 1.03 "InChI=1S/C26H28ClF3N4O2/c1-2-3-5-22-16-34(21-6-4-7-24(12-21)36-26(28,29)30)25(35)17-32(22)15-23-13-31-18-33(23)14-19-8-10-20(27)11-9-19/h4,6-13,18,22H,2-3,5,14-17H2,1H3/t22-/m0/s1" XN4 InChIKey InChI 1.03 POBHWQSJZMJUAH-QFIPXVFZSA-N XN4 SMILES_CANONICAL CACTVS 3.385 "CCCC[C@H]1CN(C(=O)CN1Cc2cncn2Cc3ccc(Cl)cc3)c4cccc(OC(F)(F)F)c4" XN4 SMILES CACTVS 3.385 "CCCC[CH]1CN(C(=O)CN1Cc2cncn2Cc3ccc(Cl)cc3)c4cccc(OC(F)(F)F)c4" XN4 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCCC[C@H]1CN(C(=O)CN1Cc2cncn2Cc3ccc(cc3)Cl)c4cccc(c4)OC(F)(F)F" XN4 SMILES "OpenEye OEToolkits" 2.0.7 "CCCCC1CN(C(=O)CN1Cc2cncn2Cc3ccc(cc3)Cl)c4cccc(c4)OC(F)(F)F" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier XN4 "SYSTEMATIC NAME" ACDLabs 12.01 "(5S)-5-butyl-4-({1-[(4-chlorophenyl)methyl]-1H-imidazol-5-yl}methyl)-1-[3-(trifluoromethoxy)phenyl]piperazin-2-one" XN4 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(5~{S})-5-butyl-4-[[3-[(4-chlorophenyl)methyl]imidazol-4-yl]methyl]-1-[3-(trifluoromethyloxy)phenyl]piperazin-2-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site XN4 "Create component" 2020-12-21 RCSB XN4 "Initial release" 2022-11-09 RCSB #