data_XN6 # _chem_comp.id XN6 _chem_comp.name "3-[4-(carbamimidamidomethyl)-3-fluoranyl-phenyl]-7-propan-2-yl-1~{H}-indole-2-carboxylic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C20 H21 F N4 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-06-08 _chem_comp.pdbx_modified_date 2024-06-21 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 368.405 _chem_comp.one_letter_code ? _chem_comp.three_letter_code XN6 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8PA4 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal XN6 N10 N1 N 0 1 Y N N N N N -22.690 -10.857 11.811 3.217 1.131 -0.016 N10 XN6 1 XN6 C12 C1 C 0 1 N N N N N N -22.546 -9.351 9.879 1.470 2.959 0.042 C12 XN6 2 XN6 C16 C2 C 0 1 Y N N N N N -21.339 -12.062 8.613 -0.409 0.469 -0.046 C16 XN6 3 XN6 C18 C3 C 0 1 Y N N N N N -21.041 -13.372 6.621 -2.484 1.029 -1.121 C18 XN6 4 XN6 C22 C4 C 0 1 N N N N N N -17.313 -13.588 5.379 -6.538 -1.080 -0.402 C22 XN6 5 XN6 C25 C5 C 0 1 Y N N N N N -19.915 -11.304 6.839 -2.497 -0.066 1.016 C25 XN6 6 XN6 C01 C6 C 0 1 N N N N N N -24.856 -12.226 14.645 6.451 -1.220 1.175 C01 XN6 7 XN6 C02 C7 C 0 1 N N N N N N -23.344 -12.078 14.582 5.742 -0.662 -0.061 C02 XN6 8 XN6 C03 C8 C 0 1 N N N N N N -22.627 -12.460 15.872 6.469 -1.134 -1.322 C03 XN6 9 XN6 C04 C9 C 0 1 Y N N N N N -22.787 -12.836 13.365 4.318 -1.153 -0.087 C04 XN6 10 XN6 C05 C10 C 0 1 Y N N N N N -22.509 -14.204 13.410 4.055 -2.504 -0.136 C05 XN6 11 XN6 C06 C11 C 0 1 Y N N N N N -21.985 -14.877 12.287 2.747 -2.971 -0.160 C06 XN6 12 XN6 C07 C12 C 0 1 Y N N N N N -21.732 -14.203 11.099 1.698 -2.096 -0.138 C07 XN6 13 XN6 C08 C13 C 0 1 Y N N N N N -22.012 -12.813 11.016 1.941 -0.721 -0.089 C08 XN6 14 XN6 C09 C14 C 0 1 Y N N N N N -22.511 -12.158 12.158 3.264 -0.242 -0.063 C09 XN6 15 XN6 C11 C15 C 0 1 Y N N N N N -22.333 -10.669 10.538 1.906 1.561 -0.004 C11 XN6 16 XN6 C15 C16 C 0 1 Y N N N N N -21.900 -11.857 9.979 1.071 0.459 -0.044 C15 XN6 17 XN6 C17 C17 C 0 1 Y N N N N N -21.618 -13.192 7.866 -1.104 1.022 -1.123 C17 XN6 18 XN6 C19 C18 C 0 1 Y N N N N N -20.193 -12.425 6.072 -3.180 0.490 -0.054 C19 XN6 19 XN6 C20 C19 C 0 1 N N N N N N -19.546 -12.643 4.664 -4.686 0.502 -0.058 C20 XN6 20 XN6 C27 C20 C 0 1 Y N N N N N -20.468 -11.114 8.089 -1.115 -0.079 1.025 C27 XN6 21 XN6 F26 F1 F 0 1 N N N N N N -19.108 -10.332 6.328 -3.183 -0.596 2.052 F26 XN6 22 XN6 N21 N2 N 0 1 N N N N N N -18.108 -12.531 4.825 -5.185 -0.845 -0.346 N21 XN6 23 XN6 N23 N3 N 0 1 N N N N N N -16.086 -13.407 5.633 -6.982 -2.278 -0.658 N23 XN6 24 XN6 N24 N4 N 0 1 N N N N N N -17.964 -14.833 5.611 -7.424 -0.051 -0.188 N24 XN6 25 XN6 O13 O1 O 0 1 N N N N N N -23.008 -9.360 8.689 0.283 3.226 0.049 O13 XN6 26 XN6 O14 O2 O 0 1 N N N N N N -22.407 -8.290 10.533 2.384 3.951 0.078 O14 XN6 27 XN6 H101 H1 H 0 0 N N N N N N -23.038 -10.144 12.420 3.993 1.713 0.009 H101 XN6 28 XN6 H181 H2 H 0 0 N N N N N N -21.257 -14.272 6.065 -3.021 1.456 -1.954 H181 XN6 29 XN6 H012 H3 H 0 0 N N N N N N -25.242 -11.680 15.518 7.481 -0.864 1.195 H012 XN6 30 XN6 H013 H4 H 0 0 N N N N N N -25.303 -11.814 13.728 5.933 -0.883 2.074 H013 XN6 31 XN6 H011 H5 H 0 0 N N N N N N -25.117 -13.291 14.734 6.443 -2.309 1.138 H011 XN6 32 XN6 H021 H6 H 0 0 N N N N N N -23.137 -11.012 14.409 5.750 0.427 -0.023 H021 XN6 33 XN6 H032 H7 H 0 0 N N N N N N -23.057 -11.895 16.712 5.964 -0.737 -2.202 H032 XN6 34 XN6 H031 H8 H 0 0 N N N N N N -22.749 -13.538 16.054 7.499 -0.779 -1.302 H031 XN6 35 XN6 H033 H9 H 0 0 N N N N N N -21.557 -12.223 15.781 6.461 -2.224 -1.359 H033 XN6 36 XN6 H051 H10 H 0 0 N N N N N N -22.698 -14.755 14.319 4.874 -3.208 -0.155 H051 XN6 37 XN6 H061 H11 H 0 0 N N N N N N -21.777 -15.935 12.352 2.558 -4.033 -0.198 H061 XN6 38 XN6 H071 H12 H 0 0 N N N N N N -21.327 -14.730 10.248 0.684 -2.466 -0.158 H071 XN6 39 XN6 H171 H13 H 0 0 N N N N N N -22.292 -13.940 8.257 -0.562 1.443 -1.957 H171 XN6 40 XN6 H201 H14 H 0 0 N N N N N N -19.907 -11.877 3.962 -5.050 0.823 0.918 H201 XN6 41 XN6 H202 H15 H 0 0 N N N N N N -19.805 -13.641 4.282 -5.042 1.192 -0.823 H202 XN6 42 XN6 H271 H16 H 0 0 N N N N N N -20.224 -10.230 8.659 -0.583 -0.512 1.859 H271 XN6 43 XN6 H211 H17 H 0 0 N N N N N N -17.655 -11.686 4.539 -4.560 -1.571 -0.498 H211 XN6 44 XN6 H231 H19 H 0 0 N N N N N N -15.655 -14.229 6.005 -7.937 -2.444 -0.698 H231 XN6 45 XN6 H241 H20 H 0 0 N N N N N N -17.450 -15.604 5.988 -8.379 -0.216 -0.227 H241 XN6 46 XN6 H2 H21 H 0 1 N N N N N N -22.692 -7.553 10.006 2.001 4.838 0.107 H2 XN6 47 XN6 H242 H22 H 0 0 N N N N N N -18.935 -14.937 5.397 -7.094 0.841 0.003 H242 XN6 48 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal XN6 C20 N21 SING N N 1 XN6 C20 C19 SING N N 2 XN6 N21 C22 SING N N 3 XN6 C22 N24 SING N N 4 XN6 C22 N23 DOUB N N 5 XN6 C19 C18 DOUB Y N 6 XN6 C19 C25 SING Y N 7 XN6 F26 C25 SING N N 8 XN6 C18 C17 SING Y N 9 XN6 C25 C27 DOUB Y N 10 XN6 C17 C16 DOUB Y N 11 XN6 C27 C16 SING Y N 12 XN6 C16 C15 SING N N 13 XN6 O13 C12 DOUB N N 14 XN6 C12 O14 SING N N 15 XN6 C12 C11 SING N N 16 XN6 C15 C11 DOUB Y N 17 XN6 C15 C08 SING Y N 18 XN6 C11 N10 SING Y N 19 XN6 C08 C07 DOUB Y N 20 XN6 C08 C09 SING Y N 21 XN6 C07 C06 SING Y N 22 XN6 N10 C09 SING Y N 23 XN6 C09 C04 DOUB Y N 24 XN6 C06 C05 DOUB Y N 25 XN6 C04 C05 SING Y N 26 XN6 C04 C02 SING N N 27 XN6 C02 C01 SING N N 28 XN6 C02 C03 SING N N 29 XN6 N10 H101 SING N N 30 XN6 C18 H181 SING N N 31 XN6 C01 H012 SING N N 32 XN6 C01 H013 SING N N 33 XN6 C01 H011 SING N N 34 XN6 C02 H021 SING N N 35 XN6 C03 H032 SING N N 36 XN6 C03 H031 SING N N 37 XN6 C03 H033 SING N N 38 XN6 C05 H051 SING N N 39 XN6 C06 H061 SING N N 40 XN6 C07 H071 SING N N 41 XN6 C17 H171 SING N N 42 XN6 C20 H201 SING N N 43 XN6 C20 H202 SING N N 44 XN6 C27 H271 SING N N 45 XN6 N21 H211 SING N N 46 XN6 N23 H231 SING N N 47 XN6 N24 H241 SING N N 48 XN6 O14 H2 SING N N 49 XN6 N24 H242 SING N N 50 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor XN6 InChI InChI 1.06 "InChI=1S/C20H21FN4O2/c1-10(2)13-4-3-5-14-16(18(19(26)27)25-17(13)14)11-6-7-12(15(21)8-11)9-24-20(22)23/h3-8,10,25H,9H2,1-2H3,(H,26,27)(H4,22,23,24)" XN6 InChIKey InChI 1.06 SRELBQAISIRQJL-UHFFFAOYSA-N XN6 SMILES_CANONICAL CACTVS 3.385 "CC(C)c1cccc2c1[nH]c(C(O)=O)c2c3ccc(CNC(N)=N)c(F)c3" XN6 SMILES CACTVS 3.385 "CC(C)c1cccc2c1[nH]c(C(O)=O)c2c3ccc(CNC(N)=N)c(F)c3" XN6 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "[H]/N=C(\N)/NCc1ccc(cc1F)c2c3cccc(c3[nH]c2C(=O)O)C(C)C" XN6 SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)c1cccc2c1[nH]c(c2c3ccc(c(c3)F)CNC(=N)N)C(=O)O" # _pdbx_chem_comp_identifier.comp_id XN6 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "3-[4-(carbamimidamidomethyl)-3-fluoranyl-phenyl]-7-propan-2-yl-1~{H}-indole-2-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site XN6 "Create component" 2023-06-08 PDBE XN6 "Initial release" 2024-06-26 RCSB #