data_XO4 # _chem_comp.id XO4 _chem_comp.name "(5S)-5-butyl-4-({1-[(4-fluorophenyl)methyl]-1H-imidazol-5-yl}methyl)-1-[3-(trifluoromethoxy)phenyl]piperazin-2-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C26 H28 F4 N4 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-12-22 _chem_comp.pdbx_modified_date 2022-11-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 504.520 _chem_comp.one_letter_code ? _chem_comp.three_letter_code XO4 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7L40 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal XO4 C10 C1 C 0 1 N N N 36.835 -36.630 -3.799 0.744 -2.735 -1.495 C10 XO4 1 XO4 C13 C2 C 0 1 Y N N 37.517 -33.367 -5.139 2.801 -0.546 -1.468 C13 XO4 2 XO4 C20 C3 C 0 1 Y N N 34.915 -34.381 -2.004 3.721 3.578 -1.051 C20 XO4 3 XO4 C21 C4 C 0 1 Y N N 33.888 -35.314 -1.926 4.235 4.315 -0.001 C21 XO4 4 XO4 C22 C5 C 0 1 Y N N 32.952 -35.434 -2.974 3.750 4.123 1.282 C22 XO4 5 XO4 C24 C6 C 0 1 Y N N 33.057 -34.607 -4.116 2.750 3.193 1.511 C24 XO4 6 XO4 C26 C7 C 0 1 Y N N 33.788 -38.550 -5.464 -2.544 -1.521 -0.126 C26 XO4 7 XO4 C28 C8 C 0 1 Y N N 31.421 -38.911 -5.879 -4.236 0.158 0.158 C28 XO4 8 XO4 C01 C9 C 0 1 N N N 38.272 -39.088 -9.933 5.155 -3.961 3.099 C01 XO4 9 XO4 C02 C10 C 0 1 N N N 38.518 -38.640 -8.476 3.907 -3.085 3.221 C02 XO4 10 XO4 C03 C11 C 0 1 N N N 37.400 -37.718 -7.916 3.036 -3.262 1.975 C03 XO4 11 XO4 C04 C12 C 0 1 N N N 37.691 -37.195 -6.507 1.788 -2.386 2.097 C04 XO4 12 XO4 C05 C13 C 0 1 N N S 36.641 -36.039 -6.033 0.858 -2.657 0.912 C05 XO4 13 XO4 C06 C14 C 0 1 N N N 35.241 -36.566 -6.169 -0.408 -1.816 1.054 C06 XO4 14 XO4 C08 C15 C 0 1 N N N 35.665 -37.699 -3.977 -0.682 -2.286 -1.344 C08 XO4 15 XO4 C12 C16 C 0 1 N N N 37.865 -34.806 -4.589 1.781 -0.840 -0.399 C12 XO4 16 XO4 C14 C17 C 0 1 Y N N 37.908 -32.853 -6.392 3.731 -1.395 -1.945 C14 XO4 17 XO4 C16 C18 C 0 1 Y N N 36.721 -31.326 -5.366 3.983 0.466 -3.008 C16 XO4 18 XO4 C18 C19 C 0 1 N N N 36.184 -32.529 -3.175 2.160 1.850 -1.968 C18 XO4 19 XO4 C19 C20 C 0 1 Y N N 35.032 -33.555 -3.146 2.719 2.653 -0.822 C19 XO4 20 XO4 C25 C21 C 0 1 Y N N 34.097 -33.666 -4.206 2.238 2.457 0.459 C25 XO4 21 XO4 C27 C22 C 0 1 Y N N 32.498 -38.053 -5.624 -2.898 -0.200 0.111 C27 XO4 22 XO4 C29 C23 C 0 1 Y N N 31.654 -40.293 -5.941 -5.219 -0.804 -0.032 C29 XO4 23 XO4 C30 C24 C 0 1 Y N N 32.949 -40.801 -5.765 -4.864 -2.118 -0.274 C30 XO4 24 XO4 C31 C25 C 0 1 Y N N 34.022 -39.934 -5.527 -3.532 -2.479 -0.322 C31 XO4 25 XO4 C33 C26 C 0 1 N N N 29.922 -37.068 -6.556 -5.984 1.748 0.426 C33 XO4 26 XO4 F23 F1 F 0 1 N N N 31.946 -36.357 -2.851 4.252 4.842 2.309 F23 XO4 27 XO4 F34 F2 F 0 1 N N N 28.640 -36.906 -7.034 -6.562 1.418 -0.804 F34 XO4 28 XO4 F35 F3 F 0 1 N N N 30.744 -36.822 -7.617 -6.163 3.113 0.674 F35 XO4 29 XO4 F36 F4 F 0 1 N N N 30.179 -36.163 -5.549 -6.593 1.005 1.442 F36 XO4 30 XO4 N07 N1 N 0 1 N N N 34.880 -37.617 -5.208 -1.195 -1.887 -0.175 N07 XO4 31 XO4 N11 N2 N 0 1 N N N 36.860 -35.618 -4.741 1.534 -2.286 -0.341 N11 XO4 32 XO4 N15 N3 N 0 1 Y N N 37.422 -31.615 -6.490 4.439 -0.750 -2.884 N15 XO4 33 XO4 N17 N4 N 0 1 Y N N 36.800 -32.433 -4.547 2.956 0.633 -2.146 N17 XO4 34 XO4 O09 O1 O 0 1 N N N 35.434 -38.533 -3.135 -1.398 -2.284 -2.322 O09 XO4 35 XO4 O32 O2 O 0 1 N N N 30.082 -38.403 -6.042 -4.586 1.450 0.391 O32 XO4 36 XO4 H1 H1 H 0 1 N N N 37.795 -37.165 -3.850 0.776 -3.822 -1.556 H1 XO4 37 XO4 H2 H2 H 0 1 N N N 36.725 -36.168 -2.807 1.162 -2.309 -2.408 H2 XO4 38 XO4 H3 H3 H 0 1 N N N 35.623 -34.287 -1.194 4.099 3.728 -2.051 H3 XO4 39 XO4 H4 H4 H 0 1 N N N 33.806 -35.951 -1.058 5.015 5.040 -0.181 H4 XO4 40 XO4 H5 H5 H 0 1 N N N 32.339 -34.698 -4.918 2.372 3.042 2.511 H5 XO4 41 XO4 H6 H6 H 0 1 N N N 39.098 -39.735 -10.263 4.859 -5.006 3.009 H6 XO4 42 XO4 H7 H7 H 0 1 N N N 37.325 -39.645 -9.990 5.721 -3.667 2.216 H7 XO4 43 XO4 H8 H8 H 0 1 N N N 38.217 -38.203 -10.584 5.775 -3.835 3.987 H8 XO4 44 XO4 H9 H9 H 0 1 N N N 38.581 -39.536 -7.842 3.341 -3.380 4.105 H9 XO4 45 XO4 H10 H10 H 0 1 N N N 39.472 -38.095 -8.436 4.203 -2.040 3.311 H10 XO4 46 XO4 H11 H11 H 0 1 N N N 37.288 -36.857 -8.591 3.602 -2.968 1.092 H11 XO4 47 XO4 H12 H12 H 0 1 N N N 36.459 -38.288 -7.889 2.740 -4.307 1.885 H12 XO4 48 XO4 H13 H13 H 0 1 N N N 37.631 -38.036 -5.800 1.269 -2.620 3.027 H13 XO4 49 XO4 H14 H14 H 0 1 N N N 38.707 -36.775 -6.491 2.079 -1.336 2.097 H14 XO4 50 XO4 H15 H15 H 0 1 N N N 36.761 -35.196 -6.729 0.596 -3.715 0.887 H15 XO4 51 XO4 H16 H16 H 0 1 N N N 34.545 -35.725 -6.034 -1.004 -2.196 1.884 H16 XO4 52 XO4 H17 H17 H 0 1 N N N 35.127 -36.977 -7.183 -0.134 -0.780 1.252 H17 XO4 53 XO4 H18 H18 H 0 1 N N N 38.733 -35.201 -5.138 2.156 -0.496 0.566 H18 XO4 54 XO4 H19 H19 H 0 1 N N N 38.110 -34.733 -3.519 0.851 -0.321 -0.632 H19 XO4 55 XO4 H20 H20 H 0 1 N N N 38.495 -33.369 -7.138 3.882 -2.416 -1.627 H20 XO4 56 XO4 H21 H21 H 0 1 N N N 36.200 -30.404 -5.153 4.359 1.214 -3.691 H21 XO4 57 XO4 H22 H22 H 0 1 N N N 36.957 -32.838 -2.456 1.127 1.579 -1.751 H22 XO4 58 XO4 H23 H23 H 0 1 N N N 35.792 -31.542 -2.889 2.196 2.445 -2.880 H23 XO4 59 XO4 H24 H24 H 0 1 N N N 34.183 -33.032 -5.076 1.458 1.731 0.637 H24 XO4 60 XO4 H25 H25 H 0 1 N N N 32.325 -36.990 -5.550 -2.132 0.547 0.259 H25 XO4 61 XO4 H26 H26 H 0 1 N N N 30.832 -40.969 -6.125 -6.261 -0.524 0.005 H26 XO4 62 XO4 H27 H27 H 0 1 N N N 33.119 -41.866 -5.813 -5.630 -2.864 -0.421 H27 XO4 63 XO4 H28 H28 H 0 1 N N N 35.020 -40.325 -5.393 -3.257 -3.506 -0.511 H28 XO4 64 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal XO4 C01 C02 SING N N 1 XO4 C02 C03 SING N N 2 XO4 C03 C04 SING N N 3 XO4 F35 C33 SING N N 4 XO4 F34 C33 SING N N 5 XO4 C33 O32 SING N N 6 XO4 C33 F36 SING N N 7 XO4 C04 C05 SING N N 8 XO4 N15 C14 SING Y N 9 XO4 N15 C16 DOUB Y N 10 XO4 C14 C13 DOUB Y N 11 XO4 C06 C05 SING N N 12 XO4 C06 N07 SING N N 13 XO4 O32 C28 SING N N 14 XO4 C05 N11 SING N N 15 XO4 C29 C28 DOUB Y N 16 XO4 C29 C30 SING Y N 17 XO4 C28 C27 SING Y N 18 XO4 C30 C31 DOUB Y N 19 XO4 C27 C26 DOUB Y N 20 XO4 C31 C26 SING Y N 21 XO4 C26 N07 SING N N 22 XO4 C16 N17 SING Y N 23 XO4 N07 C08 SING N N 24 XO4 C13 C12 SING N N 25 XO4 C13 N17 SING Y N 26 XO4 N11 C12 SING N N 27 XO4 N11 C10 SING N N 28 XO4 N17 C18 SING N N 29 XO4 C25 C24 DOUB Y N 30 XO4 C25 C19 SING Y N 31 XO4 C24 C22 SING Y N 32 XO4 C08 C10 SING N N 33 XO4 C08 O09 DOUB N N 34 XO4 C18 C19 SING N N 35 XO4 C19 C20 DOUB Y N 36 XO4 C22 F23 SING N N 37 XO4 C22 C21 DOUB Y N 38 XO4 C20 C21 SING Y N 39 XO4 C10 H1 SING N N 40 XO4 C10 H2 SING N N 41 XO4 C20 H3 SING N N 42 XO4 C21 H4 SING N N 43 XO4 C24 H5 SING N N 44 XO4 C01 H6 SING N N 45 XO4 C01 H7 SING N N 46 XO4 C01 H8 SING N N 47 XO4 C02 H9 SING N N 48 XO4 C02 H10 SING N N 49 XO4 C03 H11 SING N N 50 XO4 C03 H12 SING N N 51 XO4 C04 H13 SING N N 52 XO4 C04 H14 SING N N 53 XO4 C05 H15 SING N N 54 XO4 C06 H16 SING N N 55 XO4 C06 H17 SING N N 56 XO4 C12 H18 SING N N 57 XO4 C12 H19 SING N N 58 XO4 C14 H20 SING N N 59 XO4 C16 H21 SING N N 60 XO4 C18 H22 SING N N 61 XO4 C18 H23 SING N N 62 XO4 C25 H24 SING N N 63 XO4 C27 H25 SING N N 64 XO4 C29 H26 SING N N 65 XO4 C30 H27 SING N N 66 XO4 C31 H28 SING N N 67 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor XO4 SMILES ACDLabs 12.01 "C2C(=O)N(c1cc(ccc1)OC(F)(F)F)CC(CCCC)N2Cc3n(cnc3)Cc4ccc(F)cc4" XO4 InChI InChI 1.03 "InChI=1S/C26H28F4N4O2/c1-2-3-5-22-16-34(21-6-4-7-24(12-21)36-26(28,29)30)25(35)17-32(22)15-23-13-31-18-33(23)14-19-8-10-20(27)11-9-19/h4,6-13,18,22H,2-3,5,14-17H2,1H3/t22-/m0/s1" XO4 InChIKey InChI 1.03 OUYZKEOWZZQKSB-QFIPXVFZSA-N XO4 SMILES_CANONICAL CACTVS 3.385 "CCCC[C@H]1CN(C(=O)CN1Cc2cncn2Cc3ccc(F)cc3)c4cccc(OC(F)(F)F)c4" XO4 SMILES CACTVS 3.385 "CCCC[CH]1CN(C(=O)CN1Cc2cncn2Cc3ccc(F)cc3)c4cccc(OC(F)(F)F)c4" XO4 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCCC[C@H]1CN(C(=O)CN1Cc2cncn2Cc3ccc(cc3)F)c4cccc(c4)OC(F)(F)F" XO4 SMILES "OpenEye OEToolkits" 2.0.7 "CCCCC1CN(C(=O)CN1Cc2cncn2Cc3ccc(cc3)F)c4cccc(c4)OC(F)(F)F" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier XO4 "SYSTEMATIC NAME" ACDLabs 12.01 "(5S)-5-butyl-4-({1-[(4-fluorophenyl)methyl]-1H-imidazol-5-yl}methyl)-1-[3-(trifluoromethoxy)phenyl]piperazin-2-one" XO4 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(5~{S})-5-butyl-4-[[3-[(4-fluorophenyl)methyl]imidazol-4-yl]methyl]-1-[3-(trifluoromethyloxy)phenyl]piperazin-2-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site XO4 "Create component" 2020-12-22 RCSB XO4 "Initial release" 2022-11-09 RCSB #