data_XON # _chem_comp.id XON _chem_comp.name "~{N}-[3,5-bis(fluoranyl)-4-[[3-[1-(trifluoromethyl)cyclopropyl]-1~{H}-pyrrolo[2,3-b]pyridin-4-yl]oxy]phenyl]-2,9-dioxa-4-azaspiro[5.5]undec-3-en-3-amine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C25 H23 F5 N4 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-06-08 _chem_comp.pdbx_modified_date 2024-06-21 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 522.467 _chem_comp.one_letter_code ? _chem_comp.three_letter_code XON _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8PAR _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal XON N1 N1 N 0 1 N N N N N N 14.557 15.165 31.209 3.170 -1.432 -1.406 N1 XON 1 XON N3 N2 N 0 1 Y N N N N N 22.158 12.663 28.146 -4.692 -3.278 0.476 N3 XON 2 XON C4 C1 C 0 1 Y N N N N N 16.834 12.270 30.827 -0.396 -0.577 -1.705 C4 XON 3 XON C5 C2 C 0 1 Y N N N N N 15.940 13.125 31.423 0.906 -0.890 -2.049 C5 XON 4 XON C6 C3 C 0 1 Y N N N N N 15.482 14.215 30.694 1.851 -1.115 -1.057 C6 XON 5 XON C7 C4 C 0 1 N N N N N N 13.561 15.063 32.149 4.212 -0.997 -0.621 C7 XON 6 XON C8 C5 C 0 1 N N N N N N 11.760 16.042 33.460 6.587 -1.016 -0.153 C8 XON 7 XON C10 C6 C 0 1 N N N N N N 12.451 13.685 33.722 4.938 -0.007 1.411 C10 XON 8 XON C13 C7 C 0 1 Y N N N N N 20.116 12.917 29.418 -2.518 -2.517 -0.031 C13 XON 9 XON C15 C8 C 0 1 Y N N N N N 21.530 11.702 27.468 -5.132 -2.037 0.651 C15 XON 10 XON C17 C9 C 0 1 Y N N N N N 19.946 10.267 26.718 -5.037 0.255 0.747 C17 XON 11 XON C20 C10 C 0 1 N N N N N N 18.169 9.338 25.090 -3.420 2.069 1.662 C20 XON 12 XON C21 C11 C 0 1 N N N N N N 18.626 8.300 27.400 -4.537 2.325 -0.690 C21 XON 13 XON C22 C12 C 0 1 N N N N N N 10.916 14.732 35.415 6.190 1.454 -0.186 C22 XON 14 XON C24 C13 C 0 1 N N N N N N 13.210 16.067 36.597 8.701 0.710 1.030 C24 XON 15 XON C1 C14 C 0 1 Y N N N N N 20.200 11.295 27.687 -4.252 -0.953 0.487 C1 XON 16 XON C2 C15 C 0 1 Y N N N N N 19.494 11.926 28.705 -2.916 -1.197 0.138 C2 XON 17 XON O1 O1 O 0 1 N N N N N N 18.185 11.566 28.984 -2.039 -0.175 -0.029 O1 XON 18 XON C3 C16 C 0 1 Y N N N N N 17.293 12.466 29.541 -0.757 -0.482 -0.367 C3 XON 19 XON F1 F1 F 0 1 N N N N N N 17.312 11.219 31.512 -1.316 -0.359 -2.670 F1 XON 20 XON N2 N3 N 0 1 N N N N N N 12.732 16.112 32.367 5.401 -1.397 -0.916 N2 XON 21 XON C9 C17 C 0 1 N N N N N N 12.124 14.965 34.486 6.278 0.213 0.703 C9 XON 22 XON O2 O2 O 0 1 N N N N N N 13.546 13.892 32.791 3.931 -0.176 0.407 O2 XON 23 XON C11 C18 C 0 1 Y N N N N N 15.935 14.437 29.400 1.489 -1.026 0.280 C11 XON 24 XON C12 C19 C 0 1 Y N N N N N 16.843 13.575 28.852 0.189 -0.702 0.625 C12 XON 25 XON F2 F2 F 0 1 N N N N N N 17.270 13.791 27.593 -0.163 -0.614 1.926 F2 XON 26 XON C14 C20 C 0 1 Y N N N N N 21.436 13.253 29.107 -3.442 -3.532 0.148 C14 XON 27 XON N4 N4 N 0 1 Y N N N N N 22.046 10.981 26.436 -6.357 -1.514 0.987 N4 XON 28 XON C16 C21 C 0 1 Y N N N N N 21.093 10.109 25.998 -6.284 -0.147 1.040 C16 XON 29 XON C18 C22 C 0 1 N N N N N N 18.726 9.483 26.474 -4.540 1.676 0.696 C18 XON 30 XON C19 C23 C 0 1 N N N N N N 17.456 10.170 26.073 -4.844 2.575 1.896 C19 XON 31 XON F3 F3 F 0 1 N N N N N N 17.496 7.619 27.235 -5.620 1.843 -1.432 F3 XON 32 XON F4 F4 F 0 1 N N N N N N 19.601 7.437 27.189 -4.644 3.713 -0.555 F4 XON 33 XON F5 F5 F 0 1 N N N N N N 18.701 8.658 28.681 -3.343 2.012 -1.349 F5 XON 34 XON C23 C24 C 0 1 N N N N N N 10.931 15.643 36.629 7.558 1.713 -0.825 C23 XON 35 XON O3 O3 O 0 1 N N N N N N 12.146 15.533 37.374 8.540 1.863 0.201 O3 XON 36 XON C25 C25 C 0 1 N N N N N N 13.402 15.372 35.263 7.381 0.410 1.745 C25 XON 37 XON H1 H1 H 0 1 N N N N N N 14.649 16.078 30.812 3.348 -1.962 -2.198 H1 XON 38 XON H2 H2 H 0 1 N N N N N N 15.601 12.954 32.434 1.188 -0.959 -3.089 H2 XON 39 XON H3 H3 H 0 1 N N N N N N 11.725 17.018 33.967 6.880 -1.844 0.494 H3 XON 40 XON H4 H4 H 0 1 N N N N N N 10.770 15.812 33.040 7.403 -0.785 -0.838 H4 XON 41 XON H5 H5 H 0 1 N N N N N N 11.560 13.364 33.162 4.990 -0.902 2.030 H5 XON 42 XON H6 H6 H 0 1 N N N N N N 12.734 12.901 34.440 4.702 0.858 2.031 H6 XON 43 XON H7 H7 H 0 1 N N N N N N 19.593 13.432 30.210 -1.498 -2.749 -0.300 H7 XON 44 XON H8 H8 H 0 1 N N N N N N 17.739 8.378 24.770 -3.042 1.298 2.335 H8 XON 45 XON H9 H9 H 0 1 N N N N N N 18.682 9.812 24.240 -2.681 2.789 1.311 H9 XON 46 XON H10 H10 H 0 1 N N N N N N 9.993 14.918 34.846 5.448 1.291 -0.967 H10 XON 47 XON H11 H11 H 0 1 N N N N N N 10.931 13.687 35.758 5.902 2.315 0.418 H11 XON 48 XON H12 H12 H 0 1 N N N N N N 14.142 15.974 37.174 8.983 -0.144 0.414 H12 XON 49 XON H13 H13 H 0 1 N N N N N N 13.001 17.130 36.407 9.480 0.899 1.769 H13 XON 50 XON H14 H14 H 0 1 N N N N N N 15.574 15.282 28.833 2.224 -1.201 1.052 H14 XON 51 XON H15 H15 H 0 1 N N N N N N 21.905 14.040 29.679 -3.130 -4.557 0.016 H15 XON 52 XON H16 H16 H 0 1 N N N N N N 22.969 11.075 26.062 -7.156 -2.035 1.160 H16 XON 53 XON H17 H17 H 0 1 N N N N N N 21.227 9.397 25.197 -7.106 0.510 1.281 H17 XON 54 XON H18 H18 H 0 1 N N N N N N 17.438 11.264 25.955 -5.404 2.138 2.723 H18 XON 55 XON H19 H19 H 0 1 N N N N N N 16.495 9.829 26.485 -5.043 3.628 1.699 H19 XON 56 XON H20 H20 H 0 1 N N N N N N 10.816 16.684 36.292 7.825 0.871 -1.464 H20 XON 57 XON H21 H21 H 0 1 N N N N N N 10.089 15.374 37.284 7.513 2.624 -1.422 H21 XON 58 XON H22 H22 H 0 1 N N N N N N 13.983 14.456 35.448 7.486 -0.498 2.339 H22 XON 59 XON H23 H23 H 0 1 N N N N N N 13.980 16.049 34.617 7.122 1.244 2.397 H23 XON 60 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal XON C20 C19 SING N N 1 XON C20 C18 SING N N 2 XON C16 N4 SING Y N 3 XON C16 C17 DOUB Y N 4 XON C19 C18 SING N N 5 XON N4 C15 SING Y N 6 XON C18 C17 SING N N 7 XON C18 C21 SING N N 8 XON C17 C1 SING Y N 9 XON F4 C21 SING N N 10 XON F3 C21 SING N N 11 XON C21 F5 SING N N 12 XON C15 C1 DOUB Y N 13 XON C15 N3 SING Y N 14 XON F2 C12 SING N N 15 XON C1 C2 SING Y N 16 XON N3 C14 DOUB Y N 17 XON C2 O1 SING N N 18 XON C2 C13 DOUB Y N 19 XON C12 C11 DOUB Y N 20 XON C12 C3 SING Y N 21 XON O1 C3 SING N N 22 XON C14 C13 SING Y N 23 XON C11 C6 SING Y N 24 XON C3 C4 DOUB Y N 25 XON C6 N1 SING N N 26 XON C6 C5 DOUB Y N 27 XON C4 C5 SING Y N 28 XON C4 F1 SING N N 29 XON N1 C7 SING N N 30 XON C7 N2 DOUB N N 31 XON C7 O2 SING N N 32 XON N2 C8 SING N N 33 XON O2 C10 SING N N 34 XON C8 C9 SING N N 35 XON C10 C9 SING N N 36 XON C9 C25 SING N N 37 XON C9 C22 SING N N 38 XON C25 C24 SING N N 39 XON C22 C23 SING N N 40 XON C24 O3 SING N N 41 XON C23 O3 SING N N 42 XON N1 H1 SING N N 43 XON C5 H2 SING N N 44 XON C8 H3 SING N N 45 XON C8 H4 SING N N 46 XON C10 H5 SING N N 47 XON C10 H6 SING N N 48 XON C13 H7 SING N N 49 XON C20 H8 SING N N 50 XON C20 H9 SING N N 51 XON C22 H10 SING N N 52 XON C22 H11 SING N N 53 XON C24 H12 SING N N 54 XON C24 H13 SING N N 55 XON C11 H14 SING N N 56 XON C14 H15 SING N N 57 XON N4 H16 SING N N 58 XON C16 H17 SING N N 59 XON C19 H18 SING N N 60 XON C19 H19 SING N N 61 XON C23 H20 SING N N 62 XON C23 H21 SING N N 63 XON C25 H22 SING N N 64 XON C25 H23 SING N N 65 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor XON InChI InChI 1.06 "InChI=1S/C25H23F5N4O3/c26-16-9-14(34-22-33-12-23(13-36-22)4-7-35-8-5-23)10-17(27)20(16)37-18-1-6-31-21-19(18)15(11-32-21)24(2-3-24)25(28,29)30/h1,6,9-11H,2-5,7-8,12-13H2,(H,31,32)(H,33,34)" XON InChIKey InChI 1.06 FXMIIWBGTCDJJQ-UHFFFAOYSA-N XON SMILES_CANONICAL CACTVS 3.385 "Fc1cc(NC2=NCC3(CCOCC3)CO2)cc(F)c1Oc4ccnc5[nH]cc(c45)C6(CC6)C(F)(F)F" XON SMILES CACTVS 3.385 "Fc1cc(NC2=NCC3(CCOCC3)CO2)cc(F)c1Oc4ccnc5[nH]cc(c45)C6(CC6)C(F)(F)F" XON SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cnc2c(c1Oc3c(cc(cc3F)NC4=NCC5(CCOCC5)CO4)F)c(c[nH]2)C6(CC6)C(F)(F)F" XON SMILES "OpenEye OEToolkits" 2.0.7 "c1cnc2c(c1Oc3c(cc(cc3F)NC4=NCC5(CCOCC5)CO4)F)c(c[nH]2)C6(CC6)C(F)(F)F" # _pdbx_chem_comp_identifier.comp_id XON _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{N}-[3,5-bis(fluoranyl)-4-[[3-[1-(trifluoromethyl)cyclopropyl]-1~{H}-pyrrolo[2,3-b]pyridin-4-yl]oxy]phenyl]-2,9-dioxa-4-azaspiro[5.5]undec-3-en-3-amine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site XON "Create component" 2023-06-08 PDBE XON "Initial release" 2024-06-26 RCSB #