data_XOT # _chem_comp.id XOT _chem_comp.name "(4aR,5aR)-4,4a,5,5a-tetrahydro-1H-cyclopropa[4,5]cyclopenta[1,2-c]pyrazole-3-carboxylic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C8 H8 N2 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "MK 1903" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-11-06 _chem_comp.pdbx_modified_date 2025-02-21 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 164.161 _chem_comp.one_letter_code ? _chem_comp.three_letter_code XOT _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8UTD _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal XOT C1 C1 C 0 1 N N R N N N 147.321 163.572 123.141 2.545 -1.084 0.323 C1 XOT 1 XOT C2 C2 C 0 1 N N N N N N 147.940 163.339 124.525 1.063 -1.478 0.230 C2 XOT 2 XOT C3 C3 C 0 1 Y N N N N N 148.957 164.441 124.659 0.280 -0.196 0.131 C3 XOT 3 XOT C4 C4 C 0 1 Y N N N N N 148.853 165.301 123.593 1.093 0.876 0.159 C4 XOT 4 XOT C5 C5 C 0 1 Y N N N N N 149.960 164.923 125.457 -1.035 0.321 0.016 C5 XOT 5 XOT C6 C6 C 0 1 N N N N N N 150.486 164.380 126.737 -2.285 -0.462 -0.052 C6 XOT 6 XOT C7 C7 C 0 1 N N R N N N 147.798 164.908 122.626 2.536 0.452 0.283 C7 XOT 7 XOT C8 C8 C 0 1 N N N N N N 146.360 164.703 122.966 3.189 -0.383 -0.876 C8 XOT 8 XOT N1 N1 N 0 1 Y N N N N N 149.776 166.270 123.751 0.308 1.976 0.064 N1 XOT 9 XOT N2 N2 N 0 1 Y N N N N N 150.460 166.038 124.904 -0.927 1.634 -0.018 N2 XOT 10 XOT O1 O1 O 0 1 N N N N N N 149.975 163.330 127.198 -2.245 -1.675 -0.010 O1 XOT 11 XOT O2 O2 O 0 1 N N N N N N 151.424 164.991 127.305 -3.470 0.170 -0.162 O2 XOT 12 XOT H1 H1 H 0 1 N N N N N N 147.277 162.723 122.443 3.172 -1.637 1.022 H1 XOT 13 XOT H2 H2 H 0 1 N N N N N N 147.176 163.414 125.313 0.893 -2.088 -0.657 H2 XOT 14 XOT H3 H3 H 0 1 N N N N N N 148.424 162.352 124.576 0.766 -2.028 1.123 H3 XOT 15 XOT H4 H4 H 0 1 N N N N N N 148.054 164.960 121.558 3.179 1.036 0.941 H4 XOT 16 XOT H5 H5 H 0 1 N N N N N N 145.930 165.198 123.849 4.277 -0.386 -0.941 H5 XOT 17 XOT H6 H6 H 0 1 N N N N N N 145.608 164.664 122.165 2.661 -0.419 -1.829 H6 XOT 18 XOT H7 H7 H 0 1 N N N N N N 149.932 167.033 123.124 0.631 2.891 0.060 H7 XOT 19 XOT H8 H8 H 0 1 N N N N N N 151.661 164.535 128.104 -4.261 -0.385 -0.203 H8 XOT 20 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal XOT C7 C8 SING N N 1 XOT C7 C1 SING N N 2 XOT C7 C4 SING N N 3 XOT C8 C1 SING N N 4 XOT C1 C2 SING N N 5 XOT C4 N1 SING Y N 6 XOT C4 C3 DOUB Y N 7 XOT N1 N2 SING Y N 8 XOT C2 C3 SING N N 9 XOT C3 C5 SING Y N 10 XOT N2 C5 DOUB Y N 11 XOT C5 C6 SING N N 12 XOT C6 O1 DOUB N N 13 XOT C6 O2 SING N N 14 XOT C1 H1 SING N N 15 XOT C2 H2 SING N N 16 XOT C2 H3 SING N N 17 XOT C7 H4 SING N N 18 XOT C8 H5 SING N N 19 XOT C8 H6 SING N N 20 XOT N1 H7 SING N N 21 XOT O2 H8 SING N N 22 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor XOT SMILES ACDLabs 12.01 "O=C(O)c1n[NH]c2C3CC3Cc21" XOT InChI InChI 1.06 "InChI=1S/C8H8N2O2/c11-8(12)7-5-2-3-1-4(3)6(5)9-10-7/h3-4H,1-2H2,(H,9,10)(H,11,12)/t3-,4-/m1/s1" XOT InChIKey InChI 1.06 CUTZNERBKDMLAP-QWWZWVQMSA-N XOT SMILES_CANONICAL CACTVS 3.385 "OC(=O)c1n[nH]c2[C@@H]3C[C@@H]3Cc12" XOT SMILES CACTVS 3.385 "OC(=O)c1n[nH]c2[CH]3C[CH]3Cc12" XOT SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C1c2c([nH]nc2C(=O)O)[C@H]3[C@@H]1C3" XOT SMILES "OpenEye OEToolkits" 2.0.7 "C1c2c([nH]nc2C(=O)O)C3C1C3" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier XOT "SYSTEMATIC NAME" ACDLabs 12.01 "(4aR,5aR)-4,4a,5,5a-tetrahydro-1H-cyclopropa[4,5]cyclopenta[1,2-c]pyrazole-3-carboxylic acid" XOT "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{R},4~{R})-8,9-diazatricyclo[4.3.0.0^{2,4}]nona-1(6),7-diene-7-carboxylic acid" # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id XOT _pdbx_chem_comp_synonyms.name "MK 1903" _pdbx_chem_comp_synonyms.provenance AUTHOR _pdbx_chem_comp_synonyms.type ? # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site XOT "Create component" 2023-11-06 RCSB XOT "Initial release" 2025-02-26 RCSB #