data_XP5 # _chem_comp.id XP5 _chem_comp.name "(4S,7R)-7-(heptanoyloxy)-4-hydroxy-N,N,N-trimethyl-10-oxo-3,5,9-trioxa-4-phosphahexadecan-1-aminium 4-oxide" _chem_comp.type non-polymer _chem_comp.pdbx_type ? _chem_comp.formula "C22 H45 N O8 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 1 _chem_comp.pdbx_initial_date 2008-09-22 _chem_comp.pdbx_modified_date 2013-04-05 _chem_comp.pdbx_ambiguous_flag ? _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 482.568 _chem_comp.one_letter_code ? _chem_comp.three_letter_code XP5 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 2V4G _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal XP5 O1 O1 O 0 1 N N N 25.169 47.464 15.055 -0.883 -2.296 -2.651 O1 XP5 1 XP5 O2 O2 O 0 1 N N N 25.202 44.929 14.706 0.790 -3.098 -0.940 O2 XP5 2 XP5 P1 P1 P 0 1 N N S 25.817 46.362 14.307 -0.308 -1.984 -1.324 P1 XP5 3 XP5 O3 O3 O 0 1 N N N 27.400 46.236 14.588 -1.479 -1.982 -0.218 O3 XP5 4 XP5 C1 C1 C 0 1 N N N 28.108 45.052 14.208 -2.350 -3.094 -0.005 C1 XP5 5 XP5 C2 C2 C 0 1 N N N 29.500 45.052 14.842 -3.417 -2.716 1.024 C2 XP5 6 XP5 N1 N1 N 1 1 N N N 29.578 44.047 15.914 -4.359 -3.832 1.186 N1 XP5 7 XP5 C3 C3 C 0 1 N N N 29.473 42.692 15.351 -3.645 -5.002 1.713 C3 XP5 8 XP5 C4 C4 C 0 1 N N N 28.497 44.250 16.890 -5.422 -3.444 2.123 C4 XP5 9 XP5 C5 C5 C 0 1 N N N 30.874 44.183 16.597 -4.951 -4.165 -0.116 C5 XP5 10 XP5 O4 O4 O 0 1 N N N 25.584 46.492 12.718 0.391 -0.535 -1.368 O4 XP5 11 XP5 C6 C6 C 0 1 N N N 24.362 47.057 12.233 1.404 -0.188 -2.315 C6 XP5 12 XP5 C8 C8 C 0 1 N N N 24.091 45.525 10.236 0.776 2.208 -1.988 C8 XP5 13 XP5 O5 O5 O 0 1 N N N 25.379 44.929 10.012 -0.228 1.768 -1.036 O5 XP5 14 XP5 C9 C9 C 0 1 N N N 25.246 43.654 9.548 -1.362 2.483 -0.971 C9 XP5 15 XP5 O6 O6 O 0 1 N N N 24.134 43.140 9.444 -1.550 3.388 -1.749 O6 XP5 16 XP5 C10 C10 C 0 1 N N N 26.501 42.855 9.189 -2.400 2.157 0.071 C10 XP5 17 XP5 C11 C11 C 0 1 N N N 26.935 41.987 10.370 -3.523 3.195 0.014 C11 XP5 18 XP5 C12 C12 C 0 1 N N N 28.313 41.356 10.151 -4.577 2.864 1.073 C12 XP5 19 XP5 C13 C13 C 0 1 N N N 28.780 40.740 11.471 -5.701 3.902 1.016 C13 XP5 20 XP5 C14 C14 C 0 1 N N N 30.233 40.264 11.420 -6.754 3.571 2.075 C14 XP5 21 XP5 C15 C15 C 0 1 N N N 30.690 39.840 12.818 -7.878 4.609 2.018 C15 XP5 22 XP5 O7 O7 O 0 1 N N N 20.861 47.864 10.310 4.484 0.687 -1.705 O7 XP5 23 XP5 C17 C17 C 0 1 N N N 21.874 47.414 10.847 3.896 0.921 -0.676 C17 XP5 24 XP5 O8 O8 O 0 1 N N N 23.069 47.677 10.246 2.584 1.204 -0.702 O8 XP5 25 XP5 C18 C18 C 0 1 N N N 21.728 46.538 12.094 4.635 0.894 0.637 C18 XP5 26 XP5 C19 C19 C 0 1 N N N 20.434 45.720 12.051 6.104 0.549 0.388 C19 XP5 27 XP5 C20 C20 C 0 1 N N N 20.056 45.145 13.418 6.855 0.522 1.721 C20 XP5 28 XP5 C21 C21 C 0 1 N N N 19.519 46.238 14.346 8.324 0.176 1.473 C21 XP5 29 XP5 C22 C22 C 0 1 N N N 19.011 45.653 15.666 9.075 0.149 2.806 C22 XP5 30 XP5 C23 C23 C 0 1 N N N 18.277 46.711 16.492 10.544 -0.197 2.557 C23 XP5 31 XP5 CAM CAM C 0 1 N N R 24.228 46.965 10.709 1.937 1.212 -2.002 CAM XP5 32 XP5 H2 H2 H 0 1 N N N 25.081 44.406 13.922 1.209 -2.957 -0.080 H2 XP5 33 XP5 H11C H11C H 0 0 N N N 27.551 44.168 14.553 -2.831 -3.364 -0.945 H11C XP5 34 XP5 H12C H12C H 0 0 N N N 28.208 45.026 13.113 -1.773 -3.942 0.364 H12C XP5 35 XP5 H21C H21C H 0 0 N N N 30.247 44.815 14.071 -2.940 -2.502 1.980 H21C XP5 36 XP5 H22C H22C H 0 0 N N N 29.696 46.046 15.270 -3.956 -1.832 0.681 H22C XP5 37 XP5 H31C H31C H 0 0 N N N 29.447 42.752 14.253 -3.205 -4.755 2.679 H31C XP5 38 XP5 H32C H32C H 0 0 N N N 30.343 42.096 15.665 -4.343 -5.830 1.833 H32C XP5 39 XP5 H33C H33C H 0 0 N N N 28.551 42.215 15.714 -2.856 -5.290 1.018 H33C XP5 40 XP5 H41C H41C H 0 0 N N N 28.922 44.301 17.903 -5.951 -2.575 1.732 H41C XP5 41 XP5 H42C H42C H 0 0 N N N 27.972 45.190 16.665 -6.120 -4.272 2.243 H42C XP5 42 XP5 H43C H43C H 0 0 N N N 27.788 43.411 16.831 -4.982 -3.196 3.089 H43C XP5 43 XP5 H51C H51C H 0 0 N N N 31.681 44.217 15.850 -4.182 -4.575 -0.771 H51C XP5 44 XP5 H52C H52C H 0 0 N N N 30.882 45.111 17.187 -5.742 -4.902 0.022 H52C XP5 45 XP5 H53C H53C H 0 0 N N N 31.028 43.322 17.264 -5.369 -3.264 -0.567 H53C XP5 46 XP5 H61C H61C H 0 0 N N N 23.523 46.511 12.688 2.219 -0.909 -2.255 H61C XP5 47 XP5 H62C H62C H 0 0 N N N 24.358 48.123 12.504 0.982 -0.200 -3.320 H62C XP5 48 XP5 HAM HAM H 0 1 N N N 25.147 47.409 10.299 2.658 1.505 -2.765 HAM XP5 49 XP5 H81C H81C H 0 0 N N N 23.523 45.511 9.294 0.333 2.265 -2.982 H81C XP5 50 XP5 H82C H82C H 0 0 N N N 23.569 44.949 11.014 1.145 3.192 -1.697 H82C XP5 51 XP5 H101 H101 H 0 0 N N N 26.283 42.208 8.326 -2.811 1.166 -0.122 H101 XP5 52 XP5 H102 H102 H 0 0 N N N 27.313 43.555 8.943 -1.941 2.174 1.059 H102 XP5 53 XP5 H111 H111 H 0 0 N N N 26.978 42.617 11.270 -3.113 4.186 0.208 H111 XP5 54 XP5 H112 H112 H 0 0 N N N 26.203 41.173 10.478 -3.983 3.179 -0.974 H112 XP5 55 XP5 H121 H121 H 0 0 N N N 28.247 40.576 9.378 -4.988 1.873 0.879 H121 XP5 56 XP5 H122 H122 H 0 0 N N N 29.029 42.122 9.819 -4.118 2.880 2.061 H122 XP5 57 XP5 H131 H131 H 0 0 N N N 28.692 41.501 12.260 -5.290 4.893 1.209 H131 XP5 58 XP5 H132 H132 H 0 0 N N N 28.148 39.862 11.672 -6.160 3.885 0.028 H132 XP5 59 XP5 H141 H141 H 0 0 N N N 30.312 39.407 10.735 -7.165 2.580 1.881 H141 XP5 60 XP5 H142 H142 H 0 0 N N N 30.872 41.085 11.063 -6.295 3.587 3.063 H142 XP5 61 XP5 H151 H151 H 0 0 N N N 31.785 39.738 12.831 -8.337 4.592 1.030 H151 XP5 62 XP5 H152 H152 H 0 0 N N N 30.384 40.602 13.550 -8.628 4.373 2.772 H152 XP5 63 XP5 H153 H153 H 0 0 N N N 30.229 38.875 13.077 -7.467 5.599 2.211 H153 XP5 64 XP5 H181 H181 H 0 0 N N N 22.583 45.848 12.146 4.567 1.873 1.112 H181 XP5 65 XP5 H182 H182 H 0 0 N N N 21.697 47.192 12.978 4.190 0.143 1.289 H182 XP5 66 XP5 H191 H191 H 0 0 N N N 19.619 46.376 11.712 6.172 -0.430 -0.086 H191 XP5 67 XP5 H192 H192 H 0 0 N N N 20.594 44.875 11.365 6.549 1.300 -0.264 H192 XP5 68 XP5 H201 H201 H 0 0 N N N 19.278 44.379 13.281 6.787 1.500 2.196 H201 XP5 69 XP5 H202 H202 H 0 0 N N N 20.956 44.708 13.875 6.410 -0.230 2.374 H202 XP5 70 XP5 H211 H211 H 0 0 N N N 20.330 46.949 14.562 8.392 -0.803 0.998 H211 XP5 71 XP5 H212 H212 H 0 0 N N N 18.678 46.738 13.842 8.769 0.928 0.821 H212 XP5 72 XP5 H221 H221 H 0 0 N N N 18.318 44.827 15.447 9.007 1.128 3.280 H221 XP5 73 XP5 H222 H222 H 0 0 N N N 19.875 45.294 16.245 8.630 -0.603 3.458 H222 XP5 74 XP5 H231 H231 H 0 0 N N N 18.101 46.327 17.508 10.612 -1.175 2.082 H231 XP5 75 XP5 H232 H232 H 0 0 N N N 18.889 47.623 16.546 10.989 0.555 1.905 H232 XP5 76 XP5 H233 H233 H 0 0 N N N 17.313 46.944 16.016 11.079 -0.216 3.507 H233 XP5 77 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal XP5 O1 P1 DOUB N N 1 XP5 O2 P1 SING N N 2 XP5 P1 O3 SING N N 3 XP5 P1 O4 SING N N 4 XP5 O3 C1 SING N N 5 XP5 C1 C2 SING N N 6 XP5 C2 N1 SING N N 7 XP5 N1 C3 SING N N 8 XP5 N1 C4 SING N N 9 XP5 N1 C5 SING N N 10 XP5 O4 C6 SING N N 11 XP5 C6 CAM SING N N 12 XP5 C8 O5 SING N N 13 XP5 C8 CAM SING N N 14 XP5 O5 C9 SING N N 15 XP5 C9 O6 DOUB N N 16 XP5 C9 C10 SING N N 17 XP5 C10 C11 SING N N 18 XP5 C11 C12 SING N N 19 XP5 C12 C13 SING N N 20 XP5 C13 C14 SING N N 21 XP5 C14 C15 SING N N 22 XP5 O7 C17 DOUB N N 23 XP5 C17 O8 SING N N 24 XP5 C17 C18 SING N N 25 XP5 O8 CAM SING N N 26 XP5 C18 C19 SING N N 27 XP5 C19 C20 SING N N 28 XP5 C20 C21 SING N N 29 XP5 C21 C22 SING N N 30 XP5 C22 C23 SING N N 31 XP5 O2 H2 SING N N 32 XP5 C1 H11C SING N N 33 XP5 C1 H12C SING N N 34 XP5 C2 H21C SING N N 35 XP5 C2 H22C SING N N 36 XP5 C3 H31C SING N N 37 XP5 C3 H32C SING N N 38 XP5 C3 H33C SING N N 39 XP5 C4 H41C SING N N 40 XP5 C4 H42C SING N N 41 XP5 C4 H43C SING N N 42 XP5 C5 H51C SING N N 43 XP5 C5 H52C SING N N 44 XP5 C5 H53C SING N N 45 XP5 C6 H61C SING N N 46 XP5 C6 H62C SING N N 47 XP5 CAM HAM SING N N 48 XP5 C8 H81C SING N N 49 XP5 C8 H82C SING N N 50 XP5 C10 H101 SING N N 51 XP5 C10 H102 SING N N 52 XP5 C11 H111 SING N N 53 XP5 C11 H112 SING N N 54 XP5 C12 H121 SING N N 55 XP5 C12 H122 SING N N 56 XP5 C13 H131 SING N N 57 XP5 C13 H132 SING N N 58 XP5 C14 H141 SING N N 59 XP5 C14 H142 SING N N 60 XP5 C15 H151 SING N N 61 XP5 C15 H152 SING N N 62 XP5 C15 H153 SING N N 63 XP5 C18 H181 SING N N 64 XP5 C18 H182 SING N N 65 XP5 C19 H191 SING N N 66 XP5 C19 H192 SING N N 67 XP5 C20 H201 SING N N 68 XP5 C20 H202 SING N N 69 XP5 C21 H211 SING N N 70 XP5 C21 H212 SING N N 71 XP5 C22 H221 SING N N 72 XP5 C22 H222 SING N N 73 XP5 C23 H231 SING N N 74 XP5 C23 H232 SING N N 75 XP5 C23 H233 SING N N 76 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor XP5 SMILES ACDLabs 10.04 "O=C(OCC(OC(=O)CCCCCC)COP(=O)(OCC[N+](C)(C)C)O)CCCCCC" XP5 SMILES_CANONICAL CACTVS 3.341 "CCCCCCC(=O)OC[C@H](CO[P@](O)(=O)OCC[N+](C)(C)C)OC(=O)CCCCCC" XP5 SMILES CACTVS 3.341 "CCCCCCC(=O)OC[CH](CO[P](O)(=O)OCC[N+](C)(C)C)OC(=O)CCCCCC" XP5 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CCCCCCC(=O)OC[C@H](CO[P@@](=O)(O)OCC[N+](C)(C)C)OC(=O)CCCCCC" XP5 SMILES "OpenEye OEToolkits" 1.5.0 "CCCCCCC(=O)OCC(COP(=O)(O)OCC[N+](C)(C)C)OC(=O)CCCCCC" XP5 InChI InChI 1.03 "InChI=1S/C22H44NO8P/c1-6-8-10-12-14-21(24)28-18-20(31-22(25)15-13-11-9-7-2)19-30-32(26,27)29-17-16-23(3,4)5/h20H,6-19H2,1-5H3/p+1/t20-/m1/s1" XP5 InChIKey InChI 1.03 RBFSPQDASPEAID-HXUWFJFHSA-O # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier XP5 "SYSTEMATIC NAME" ACDLabs 10.04 "(4S,7R)-7-(heptanoyloxy)-4-hydroxy-N,N,N-trimethyl-10-oxo-3,5,9-trioxa-4-phosphahexadecan-1-aminium 4-oxide" XP5 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "2-[[(2R)-2,3-di(heptanoyloxy)propoxy]-hydroxy-phosphoryl]oxyethyl-trimethyl-azanium" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site XP5 "Create component" 2008-09-22 EBI XP5 "Modify descriptor" 2011-06-04 RCSB XP5 "Initial release" 2013-04-10 RCSB #