data_XP8 # _chem_comp.id XP8 _chem_comp.name "O-phosphono-N-(8-sulfanyloctanoyl)-L-threonine" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C12 H24 N O7 P S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2010-03-12 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 357.360 _chem_comp.one_letter_code ? _chem_comp.three_letter_code XP8 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3M2V _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal XP8 C C C 0 1 N N N 23.134 37.750 -45.171 -2.819 -1.631 -0.185 C XP8 1 XP8 N N N 0 1 N N N 24.449 38.432 -47.134 -1.291 0.146 0.444 N XP8 2 XP8 O O O 0 1 N N N 22.505 38.158 -44.137 -3.840 -2.481 0.013 O XP8 3 XP8 P P P 0 1 N N N 20.257 36.597 -47.499 -5.552 0.716 -0.540 P XP8 4 XP8 C1 C1 C 0 1 N N N 25.246 39.370 -47.630 -0.032 -0.318 0.574 C1 XP8 5 XP8 O1 O1 O 0 1 N N N 24.992 40.572 -47.526 0.164 -1.407 1.071 O1 XP8 6 XP8 C2 C2 C 0 1 N N N 26.504 38.884 -48.348 1.131 0.517 0.104 C2 XP8 7 XP8 C3 C3 C 0 1 N N N 27.646 39.908 -48.184 2.437 -0.235 0.366 C3 XP8 8 XP8 C4 C4 C 0 1 N N N 29.076 39.419 -48.525 3.618 0.612 -0.112 C4 XP8 9 XP8 C5 C5 C 0 1 N N N 29.207 38.675 -49.848 4.924 -0.140 0.150 C5 XP8 10 XP8 C6 C6 C 0 1 N N N 28.939 39.608 -51.057 6.106 0.707 -0.328 C6 XP8 11 XP8 C7 C7 C 0 1 N N N 30.088 40.608 -51.267 7.412 -0.045 -0.065 C7 XP8 12 XP8 C8 C8 C 0 1 N N N 30.094 41.152 -52.698 8.593 0.802 -0.543 C8 XP8 13 XP8 S8 S8 S 0 1 N N N 31.101 40.177 -53.839 10.142 -0.090 -0.232 S8 XP8 14 XP8 CA CA C 0 1 N N S 23.243 38.700 -46.370 -2.422 -0.665 0.901 CA XP8 15 XP8 CB CB C 0 1 N N R 21.968 38.619 -47.198 -3.605 0.248 1.229 CB XP8 16 XP8 CG CG C 0 1 N N N 22.051 39.520 -48.418 -3.165 1.309 2.241 CG XP8 17 XP8 O1P O1P O 0 1 N N N 20.554 35.070 -47.703 -5.785 -0.816 -0.979 O1P XP8 18 XP8 O2P O2P O 0 1 N N N 19.685 36.979 -46.154 -5.750 1.676 -1.817 O2P XP8 19 XP8 O3P O3P O 0 1 N N N 19.451 37.192 -48.665 -6.530 1.083 0.509 O3P XP8 20 XP8 O4P O4P O 0 1 N N N 21.736 37.253 -47.620 -4.058 0.888 0.035 O4P XP8 21 XP8 OXT OXT O 0 1 N N N 23.683 36.616 -45.236 -2.216 -1.645 -1.232 OXT XP8 22 XP8 HN HN H 0 1 N N N 24.695 37.477 -47.297 -1.448 1.017 0.046 HN XP8 23 XP8 HO HO H 0 1 N N N 22.528 37.486 -43.466 -4.057 -3.082 -0.712 HO XP8 24 XP8 H2 H2 H 0 1 N N N 26.817 37.922 -47.917 1.031 0.709 -0.965 H2 XP8 25 XP8 H2A H2A H 0 1 N N N 26.283 38.758 -49.418 1.141 1.463 0.644 H2A XP8 26 XP8 H3 H3 H 0 1 N N N 27.424 40.751 -48.855 2.537 -0.428 1.434 H3 XP8 27 XP8 H3A H3A H 0 1 N N N 27.653 40.218 -47.129 2.427 -1.182 -0.175 H3A XP8 28 XP8 H4 H4 H 0 1 N N N 29.728 40.304 -48.574 3.518 0.804 -1.180 H4 XP8 29 XP8 H4A H4A H 0 1 N N N 29.394 38.734 -47.725 3.629 1.558 0.428 H4A XP8 30 XP8 H5 H5 H 0 1 N N N 30.228 38.275 -49.929 5.024 -0.333 1.219 H5 XP8 31 XP8 H5A H5A H 0 1 N N N 28.476 37.854 -49.866 4.914 -1.087 -0.390 H5A XP8 32 XP8 H6 H6 H 0 1 N N N 28.836 38.992 -51.963 6.006 0.900 -1.396 H6 XP8 33 XP8 H6A H6A H 0 1 N N N 28.011 40.169 -50.872 6.116 1.653 0.213 H6A XP8 34 XP8 H7 H7 H 0 1 N N N 29.962 41.447 -50.567 7.512 -0.238 1.003 H7 XP8 35 XP8 H7A H7A H 0 1 N N N 31.044 40.098 -51.076 7.401 -0.992 -0.606 H7A XP8 36 XP8 H8 H8 H 0 1 N N N 29.058 41.150 -53.069 8.493 0.995 -1.611 H8 XP8 37 XP8 H8A H8A H 0 1 N N N 30.498 42.175 -52.673 8.604 1.748 -0.003 H8A XP8 38 XP8 HS8 HS8 H 0 1 N N N 30.947 40.824 -54.956 11.077 0.759 -0.694 HS8 XP8 39 XP8 HA HA H 0 1 N N N 23.338 39.739 -46.021 -2.133 -1.220 1.794 HA XP8 40 XP8 HB HB H 0 1 N N N 21.132 38.958 -46.569 -4.415 -0.345 1.653 HB XP8 41 XP8 HG HG H 0 1 N N N 21.119 39.442 -48.996 -4.008 1.959 2.475 HG XP8 42 XP8 HGA HGA H 0 1 N N N 22.196 40.562 -48.095 -2.820 0.820 3.152 HGA XP8 43 XP8 HGB HGB H 0 1 N N N 22.899 39.209 -49.046 -2.355 1.902 1.817 HGB XP8 44 XP8 HO1P HO1P H 0 0 N N N 20.176 34.781 -48.525 -5.177 -1.125 -1.665 HO1P XP8 45 XP8 HO2P HO2P H 0 0 N N N 18.919 37.526 -46.279 -6.629 1.624 -2.216 HO2P XP8 46 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal XP8 CA C SING N N 1 XP8 OXT C DOUB N N 2 XP8 C O SING N N 3 XP8 C1 N SING N N 4 XP8 N CA SING N N 5 XP8 N HN SING N N 6 XP8 O HO SING N N 7 XP8 O3P P DOUB N N 8 XP8 O1P P SING N N 9 XP8 O4P P SING N N 10 XP8 P O2P SING N N 11 XP8 C2 C1 SING N N 12 XP8 C1 O1 DOUB N N 13 XP8 C2 C3 SING N N 14 XP8 C2 H2 SING N N 15 XP8 C2 H2A SING N N 16 XP8 C4 C3 SING N N 17 XP8 C3 H3 SING N N 18 XP8 C3 H3A SING N N 19 XP8 C5 C4 SING N N 20 XP8 C4 H4 SING N N 21 XP8 C4 H4A SING N N 22 XP8 C6 C5 SING N N 23 XP8 C5 H5 SING N N 24 XP8 C5 H5A SING N N 25 XP8 C7 C6 SING N N 26 XP8 C6 H6 SING N N 27 XP8 C6 H6A SING N N 28 XP8 C8 C7 SING N N 29 XP8 C7 H7 SING N N 30 XP8 C7 H7A SING N N 31 XP8 S8 C8 SING N N 32 XP8 C8 H8 SING N N 33 XP8 C8 H8A SING N N 34 XP8 S8 HS8 SING N N 35 XP8 CB CA SING N N 36 XP8 CA HA SING N N 37 XP8 CG CB SING N N 38 XP8 O4P CB SING N N 39 XP8 CB HB SING N N 40 XP8 CG HG SING N N 41 XP8 CG HGA SING N N 42 XP8 CG HGB SING N N 43 XP8 O1P HO1P SING N N 44 XP8 O2P HO2P SING N N 45 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor XP8 SMILES ACDLabs 12.01 "O=C(O)C(NC(=O)CCCCCCCS)C(OP(=O)(O)O)C" XP8 SMILES_CANONICAL CACTVS 3.370 "C[C@@H](O[P](O)(O)=O)[C@H](NC(=O)CCCCCCCS)C(O)=O" XP8 SMILES CACTVS 3.370 "C[CH](O[P](O)(O)=O)[CH](NC(=O)CCCCCCCS)C(O)=O" XP8 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "C[C@H]([C@@H](C(=O)O)NC(=O)CCCCCCCS)OP(=O)(O)O" XP8 SMILES "OpenEye OEToolkits" 1.7.0 "CC(C(C(=O)O)NC(=O)CCCCCCCS)OP(=O)(O)O" XP8 InChI InChI 1.03 "InChI=1S/C12H24NO7PS/c1-9(20-21(17,18)19)11(12(15)16)13-10(14)7-5-3-2-4-6-8-22/h9,11,22H,2-8H2,1H3,(H,13,14)(H,15,16)(H2,17,18,19)/t9-,11+/m1/s1" XP8 InChIKey InChI 1.03 WKMFNKCCBNAWBN-KOLCDFICSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier XP8 "SYSTEMATIC NAME" ACDLabs 12.01 "O-phosphono-N-(8-sulfanyloctanoyl)-L-threonine" XP8 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "(2S,3R)-3-phosphonooxy-2-(8-sulfanyloctanoylamino)butanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site XP8 "Create component" 2010-03-12 RCSB XP8 "Modify descriptor" 2011-06-04 RCSB #