data_XPA # _chem_comp.id XPA _chem_comp.name 1,2-DIDECANOYL-SN-GLYCERO-3-PHOSPHATE _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C23 H44 O8 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge -1 _chem_comp.pdbx_initial_date 2004-08-02 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 479.564 _chem_comp.one_letter_code ? _chem_comp.three_letter_code XPA _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1U4U _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal XPA O1 O1 O -1 1 N N N 11.267 29.271 11.969 0.760 3.919 -2.191 O1 XPA 1 XPA O2 O2 O 0 1 N N N 13.357 28.214 11.131 -1.343 4.700 -1.036 O2 XPA 2 XPA P1 P1 P 0 1 N N N 12.089 28.957 10.720 -0.600 3.473 -1.610 P1 XPA 3 XPA O3 O3 O 0 1 N N N 12.475 30.268 10.025 -1.488 2.805 -2.776 O3 XPA 4 XPA O4 O4 O 0 1 N N N 11.266 28.084 9.759 -0.356 2.396 -0.438 O4 XPA 5 XPA C1 C1 C 0 1 N N N 12.056 27.707 8.595 0.530 3.005 0.504 C1 XPA 6 XPA C2 C2 C 0 1 N N R 11.379 28.233 7.323 0.804 2.029 1.650 C2 XPA 7 XPA C3 C3 C 0 1 N N N 12.315 28.167 6.113 -0.522 1.577 2.264 C3 XPA 8 XPA O5 O5 O 0 1 N N N 13.373 27.227 6.409 -1.374 1.026 1.225 O5 XPA 9 XPA C4 C4 C 0 1 N N N 14.439 27.239 5.419 -2.595 0.563 1.534 C4 XPA 10 XPA O6 O6 O 0 1 N N N 15.562 26.757 5.661 -2.987 0.606 2.676 O6 XPA 11 XPA C5 C5 C 0 1 N N N 14.082 27.887 4.076 -3.479 -0.009 0.456 C5 XPA 12 XPA C6 C6 C 0 1 N N N 15.195 27.867 3.027 -4.806 -0.461 1.070 C6 XPA 13 XPA C7 C7 C 0 1 N N N 16.553 28.207 3.625 -5.703 -1.042 -0.025 C7 XPA 14 XPA C8 C8 C 0 1 N N N 16.605 29.621 4.135 -7.029 -1.494 0.589 C8 XPA 15 XPA C9 C9 C 0 1 N N N 18.028 30.134 4.173 -7.927 -2.075 -0.505 C9 XPA 16 XPA C10 C10 C 0 1 N N N 18.149 31.460 3.438 -9.253 -2.526 0.109 C10 XPA 17 XPA C11 C11 C 0 1 N N N 18.016 31.283 1.929 -10.150 -3.108 -0.986 C11 XPA 18 XPA C12 C12 C 0 1 N N N 19.312 31.616 1.206 -11.477 -3.559 -0.371 C12 XPA 19 XPA C13 C13 C 0 1 N N N 19.445 33.104 0.975 -12.374 -4.140 -1.466 C13 XPA 20 XPA O7 O7 O 0 1 N N N 10.089 27.549 7.125 1.520 0.873 1.140 O7 XPA 21 XPA C14 C14 C 0 1 N N N 10.076 26.088 6.863 2.862 0.871 1.116 C14 XPA 22 XPA O8 O8 O 0 1 N N N 9.005 25.464 6.701 3.474 1.832 1.519 O8 XPA 23 XPA C15 C15 C 0 1 N N N 11.416 25.372 6.762 3.605 -0.329 0.588 C15 XPA 24 XPA C16 C16 C 0 1 N N N 11.389 24.193 5.782 5.111 -0.074 0.671 C16 XPA 25 XPA C17 C17 C 0 1 N N N 11.093 22.865 6.481 5.865 -1.292 0.134 C17 XPA 26 XPA C18 C18 C 0 1 N N N 12.315 21.950 6.515 7.371 -1.037 0.218 C18 XPA 27 XPA C19 C19 C 0 1 N N N 13.316 22.375 7.588 8.126 -2.255 -0.319 C19 XPA 28 XPA C20 C20 C 0 1 N N N 13.977 21.171 8.242 9.632 -2.000 -0.236 C20 XPA 29 XPA C21 C21 C 0 1 N N N 15.450 21.415 8.471 10.386 -3.218 -0.773 C21 XPA 30 XPA C22 C22 C 0 1 N N N 16.291 20.351 7.800 11.892 -2.963 -0.689 C22 XPA 31 XPA C23 C23 C 0 1 N N N 17.760 20.494 8.166 12.646 -4.181 -1.226 C23 XPA 32 XPA H1 H1 H 0 1 N N N 12.251 30.202 8.940 -1.610 3.482 -3.456 H1 XPA 33 XPA H2 H2 H 0 1 N N N 13.086 28.103 8.705 0.072 3.911 0.900 H2 XPA 34 XPA H3 H3 H 0 1 N N N 12.172 26.603 8.570 1.468 3.257 0.009 H3 XPA 35 XPA H4 H4 H 0 1 N N N 11.113 29.295 7.437 1.408 2.523 2.411 H4 XPA 36 XPA H5 H5 H 0 1 N N N 12.751 29.158 5.868 -1.019 2.431 2.725 H5 XPA 37 XPA H6 H6 H 0 1 N N N 11.781 27.852 5.191 -0.332 0.816 3.020 H6 XPA 38 XPA H7 H7 H 0 1 N N N 13.184 27.386 3.658 -2.983 -0.863 -0.005 H7 XPA 39 XPA H8 H8 H 0 1 N N N 13.769 28.937 4.252 -3.669 0.752 -0.301 H8 XPA 40 XPA H9 H9 H 0 1 N N N 14.958 28.580 2.209 -4.616 -1.222 1.826 H9 XPA 41 XPA H10 H10 H 0 1 N N N 15.239 26.872 2.537 -5.302 0.393 1.531 H10 XPA 42 XPA H11 H11 H 0 1 N N N 16.794 27.504 4.451 -5.207 -1.896 -0.486 H11 XPA 43 XPA H12 H12 H 0 1 N N N 17.354 28.051 2.872 -5.893 -0.281 -0.781 H12 XPA 44 XPA H13 H13 H 0 1 N N N 16.147 29.678 5.144 -7.526 -0.639 1.050 H13 XPA 45 XPA H14 H14 H 0 1 N N N 15.976 30.277 3.497 -6.839 -2.255 1.346 H14 XPA 46 XPA H15 H15 H 0 1 N N N 18.365 30.246 5.225 -7.430 -2.929 -0.966 H15 XPA 47 XPA H16 H16 H 0 1 N N N 18.716 29.385 3.728 -8.117 -1.313 -1.262 H16 XPA 48 XPA H17 H17 H 0 1 N N N 19.120 31.940 3.681 -9.749 -1.672 0.570 H17 XPA 49 XPA H18 H18 H 0 1 N N N 17.378 32.168 3.806 -9.063 -3.288 0.865 H18 XPA 50 XPA H19 H19 H 0 1 N N N 17.708 30.242 1.694 -9.654 -3.962 -1.447 H19 XPA 51 XPA H20 H20 H 0 1 N N N 17.192 31.919 1.542 -10.341 -2.346 -1.742 H20 XPA 52 XPA H21 H21 H 0 1 N N N 19.362 31.075 0.238 -11.973 -2.705 0.090 H21 XPA 53 XPA H22 H22 H 0 1 N N N 20.183 31.243 1.787 -11.287 -4.320 0.385 H22 XPA 54 XPA H23 H23 H 0 1 N N N 18.474 33.523 0.640 -11.878 -4.994 -1.927 H23 XPA 55 XPA H24 H24 H 0 1 N N N 20.210 33.300 0.195 -13.319 -4.462 -1.029 H24 XPA 56 XPA H25 H25 H 0 1 N N N 19.751 33.608 1.915 -12.564 -3.379 -2.222 H25 XPA 57 XPA H26 H26 H 0 1 N N N 12.200 26.097 6.459 3.351 -1.205 1.184 H26 XPA 58 XPA H27 H27 H 0 1 N N N 11.724 25.019 7.769 3.323 -0.502 -0.451 H27 XPA 59 XPA H28 H28 H 0 1 N N N 12.359 24.127 5.245 5.365 0.803 0.075 H28 XPA 60 XPA H29 H29 H 0 1 N N N 10.633 24.377 4.990 5.393 0.100 1.710 H29 XPA 61 XPA H30 H30 H 0 1 N N N 10.734 23.052 7.514 5.611 -2.168 0.731 H30 XPA 62 XPA H31 H31 H 0 1 N N N 10.250 22.350 5.973 5.583 -1.465 -0.904 H31 XPA 63 XPA H32 H32 H 0 1 N N N 12.808 21.940 5.520 7.625 -0.160 -0.379 H32 XPA 64 XPA H33 H33 H 0 1 N N N 11.997 20.900 6.689 7.654 -0.863 1.256 H33 XPA 65 XPA H34 H34 H 0 1 N N N 14.089 23.039 7.148 7.872 -3.131 0.277 H34 XPA 66 XPA H35 H35 H 0 1 N N N 12.810 22.995 8.358 7.843 -2.428 -1.358 H35 XPA 67 XPA H36 H36 H 0 1 N N N 13.836 20.267 7.614 9.886 -1.123 -0.832 H36 XPA 68 XPA H37 H37 H 0 1 N N N 13.478 20.934 9.205 9.914 -1.826 0.803 H37 XPA 69 XPA H38 H38 H 0 1 N N N 15.733 22.420 8.096 10.132 -4.094 -0.176 H38 XPA 70 XPA H39 H39 H 0 1 N N N 15.666 21.444 9.560 10.104 -3.391 -1.811 H39 XPA 71 XPA H40 H40 H 0 1 N N N 16.163 20.406 6.700 12.146 -2.086 -1.285 H40 XPA 72 XPA H41 H41 H 0 1 N N N 15.922 19.342 8.083 12.174 -2.789 0.350 H41 XPA 73 XPA H42 H42 H 0 1 N N N 18.077 19.641 8.802 12.364 -4.354 -2.264 H42 XPA 74 XPA H43 H43 H 0 1 N N N 17.922 21.439 8.725 13.719 -3.999 -1.166 H43 XPA 75 XPA H44 H44 H 0 1 N N N 18.381 20.508 7.246 12.393 -5.057 -0.629 H44 XPA 76 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal XPA O1 P1 SING N N 1 XPA O2 P1 DOUB N N 2 XPA P1 O3 SING N N 3 XPA P1 O4 SING N N 4 XPA O3 H1 SING N N 5 XPA O4 C1 SING N N 6 XPA C1 C2 SING N N 7 XPA C1 H2 SING N N 8 XPA C1 H3 SING N N 9 XPA C2 C3 SING N N 10 XPA C2 O7 SING N N 11 XPA C2 H4 SING N N 12 XPA C3 O5 SING N N 13 XPA C3 H5 SING N N 14 XPA C3 H6 SING N N 15 XPA O5 C4 SING N N 16 XPA C4 O6 DOUB N N 17 XPA C4 C5 SING N N 18 XPA C5 C6 SING N N 19 XPA C5 H7 SING N N 20 XPA C5 H8 SING N N 21 XPA C6 C7 SING N N 22 XPA C6 H9 SING N N 23 XPA C6 H10 SING N N 24 XPA C7 C8 SING N N 25 XPA C7 H11 SING N N 26 XPA C7 H12 SING N N 27 XPA C8 C9 SING N N 28 XPA C8 H13 SING N N 29 XPA C8 H14 SING N N 30 XPA C9 C10 SING N N 31 XPA C9 H15 SING N N 32 XPA C9 H16 SING N N 33 XPA C10 C11 SING N N 34 XPA C10 H17 SING N N 35 XPA C10 H18 SING N N 36 XPA C11 C12 SING N N 37 XPA C11 H19 SING N N 38 XPA C11 H20 SING N N 39 XPA C12 C13 SING N N 40 XPA C12 H21 SING N N 41 XPA C12 H22 SING N N 42 XPA C13 H23 SING N N 43 XPA C13 H24 SING N N 44 XPA C13 H25 SING N N 45 XPA O7 C14 SING N N 46 XPA C14 O8 DOUB N N 47 XPA C14 C15 SING N N 48 XPA C15 C16 SING N N 49 XPA C15 H26 SING N N 50 XPA C15 H27 SING N N 51 XPA C16 C17 SING N N 52 XPA C16 H28 SING N N 53 XPA C16 H29 SING N N 54 XPA C17 C18 SING N N 55 XPA C17 H30 SING N N 56 XPA C17 H31 SING N N 57 XPA C18 C19 SING N N 58 XPA C18 H32 SING N N 59 XPA C18 H33 SING N N 60 XPA C19 C20 SING N N 61 XPA C19 H34 SING N N 62 XPA C19 H35 SING N N 63 XPA C20 C21 SING N N 64 XPA C20 H36 SING N N 65 XPA C20 H37 SING N N 66 XPA C21 C22 SING N N 67 XPA C21 H38 SING N N 68 XPA C21 H39 SING N N 69 XPA C22 C23 SING N N 70 XPA C22 H40 SING N N 71 XPA C22 H41 SING N N 72 XPA C23 H42 SING N N 73 XPA C23 H43 SING N N 74 XPA C23 H44 SING N N 75 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor XPA SMILES ACDLabs 10.04 "O=P([O-])(O)OCC(OC(=O)CCCCCCCCC)COC(=O)CCCCCCCCC" XPA SMILES_CANONICAL CACTVS 3.341 "CCCCCCCCCC(=O)OC[C@H](CO[P](O)([O-])=O)OC(=O)CCCCCCCCC" XPA SMILES CACTVS 3.341 "CCCCCCCCCC(=O)OC[CH](CO[P](O)([O-])=O)OC(=O)CCCCCCCCC" XPA SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CCCCCCCCCC(=O)OC[C@H](CO[P@@](=O)(O)[O-])OC(=O)CCCCCCCCC" XPA SMILES "OpenEye OEToolkits" 1.5.0 "CCCCCCCCCC(=O)OCC(COP(=O)(O)[O-])OC(=O)CCCCCCCCC" XPA InChI InChI 1.03 "InChI=1S/C23H45O8P/c1-3-5-7-9-11-13-15-17-22(24)29-19-21(20-30-32(26,27)28)31-23(25)18-16-14-12-10-8-6-4-2/h21H,3-20H2,1-2H3,(H2,26,27,28)/p-1/t21-/m1/s1" XPA InChIKey InChI 1.03 PHQFPHNJHDEXLJ-OAQYLSRUSA-M # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier XPA "SYSTEMATIC NAME" ACDLabs 10.04 "(2R)-2,3-bis(decanoyloxy)propyl hydrogen phosphate" XPA "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[(2R)-2,3-di(decanoyloxy)propyl] hydrogen phosphate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site XPA "Create component" 2004-08-02 EBI XPA "Modify descriptor" 2011-06-04 RCSB #