data_XPS # _chem_comp.id XPS _chem_comp.name "6-deoxy-6-(methylamino)-D-galactitol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C7 H17 N O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-12-23 _chem_comp.pdbx_modified_date 2021-09-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 195.214 _chem_comp.one_letter_code ? _chem_comp.three_letter_code XPS _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7L2V _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal XPS C1 C1 C 0 1 N N R 133.061 131.700 104.886 -0.993 -0.490 0.137 C1 XPS 1 XPS C2 C2 C 0 1 N N R 135.179 132.242 103.625 1.497 -0.440 -0.064 C2 XPS 2 XPS C3 C3 C 0 1 N N S 131.917 132.540 105.452 -2.265 0.360 0.125 C3 XPS 3 XPS C4 C4 C 0 1 N N N 136.264 133.308 103.492 2.722 0.472 -0.152 C4 XPS 4 XPS C5 C5 C 0 1 N N N 131.258 133.337 104.329 -3.490 -0.552 0.213 C5 XPS 5 XPS C6 C6 C 0 1 N N N 136.784 134.431 101.471 5.135 0.497 -0.349 C6 XPS 6 XPS N N1 N 0 1 N N N 136.914 133.182 102.200 3.936 -0.347 -0.261 N XPS 7 XPS C C7 C 0 1 N N S 134.349 132.525 104.875 0.225 0.410 -0.076 C XPS 8 XPS O O1 O 0 1 N N N 135.108 132.225 106.013 0.290 1.380 0.972 O XPS 9 XPS O1 O2 O 0 1 N N N 132.728 131.271 103.595 -1.058 -1.459 -0.911 O1 XPS 10 XPS O2 O3 O 0 1 N N N 135.777 130.981 103.735 1.553 -1.196 1.147 O2 XPS 11 XPS O3 O4 O 0 1 N N N 132.408 133.424 106.421 -2.320 1.117 -1.086 O3 XPS 12 XPS O4 O5 O 0 1 N N N 131.272 132.579 103.150 -4.671 0.245 0.319 O4 XPS 13 XPS H1 H1 H 0 1 N N N 133.212 130.832 105.545 -0.905 -0.999 1.097 H1 XPS 14 XPS H2 H2 H 0 1 N N N 134.523 132.287 102.743 1.488 -1.120 -0.916 H2 XPS 15 XPS H3 H3 H 0 1 N N N 131.168 131.865 105.892 -2.256 1.040 0.978 H3 XPS 16 XPS H4 H4 H 0 1 N N N 137.008 133.175 104.291 2.635 1.112 -1.030 H4 XPS 17 XPS H5 H5 H 0 1 N N N 135.809 134.306 103.577 2.780 1.090 0.743 H5 XPS 18 XPS H6 H6 H 0 1 N N N 131.812 134.274 104.170 -3.548 -1.170 -0.682 H6 XPS 19 XPS H7 H7 H 0 1 N N N 130.218 133.568 104.604 -3.403 -1.192 1.092 H7 XPS 20 XPS H8 H8 H 0 1 N N N 137.276 134.337 100.492 5.210 1.115 0.546 H8 XPS 21 XPS H9 H9 H 0 1 N N N 135.718 134.661 101.325 6.019 -0.135 -0.428 H9 XPS 22 XPS H10 H10 H 0 1 N N N 137.259 135.241 102.044 5.065 1.138 -1.228 H10 XPS 23 XPS H11 H11 H 0 1 N N N 136.482 132.445 101.680 3.878 -0.976 -1.048 H11 XPS 24 XPS H13 H13 H 0 1 N N N 134.076 133.591 104.874 0.137 0.919 -1.036 H13 XPS 25 XPS H14 H14 H 0 1 N N N 134.594 132.400 106.792 0.370 0.998 1.857 H14 XPS 26 XPS H15 H15 H 0 1 N N N 131.927 130.762 103.627 -1.138 -1.077 -1.796 H15 XPS 27 XPS H16 H16 H 0 1 N N N 135.103 130.317 103.818 1.564 -0.655 1.949 H16 XPS 28 XPS H17 H17 H 0 1 N N N 132.819 132.931 107.121 -2.332 0.575 -1.887 H17 XPS 29 XPS H18 H18 H 0 1 N N N 130.862 133.074 102.450 -5.488 -0.269 0.380 H18 XPS 30 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal XPS C6 N SING N N 1 XPS N C4 SING N N 2 XPS O4 C5 SING N N 3 XPS C4 C2 SING N N 4 XPS O1 C1 SING N N 5 XPS C2 O2 SING N N 6 XPS C2 C SING N N 7 XPS C5 C3 SING N N 8 XPS C C1 SING N N 9 XPS C O SING N N 10 XPS C1 C3 SING N N 11 XPS C3 O3 SING N N 12 XPS C1 H1 SING N N 13 XPS C2 H2 SING N N 14 XPS C3 H3 SING N N 15 XPS C4 H4 SING N N 16 XPS C4 H5 SING N N 17 XPS C5 H6 SING N N 18 XPS C5 H7 SING N N 19 XPS C6 H8 SING N N 20 XPS C6 H9 SING N N 21 XPS C6 H10 SING N N 22 XPS N H11 SING N N 23 XPS C H13 SING N N 24 XPS O H14 SING N N 25 XPS O1 H15 SING N N 26 XPS O2 H16 SING N N 27 XPS O3 H17 SING N N 28 XPS O4 H18 SING N N 29 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor XPS SMILES ACDLabs 12.01 "C(C(O)CO)(C(C(O)CNC)O)O" XPS InChI InChI 1.03 "InChI=1S/C7H17NO5/c1-8-2-4(10)6(12)7(13)5(11)3-9/h4-13H,2-3H2,1H3/t4-,5+,6+,7-/m1/s1" XPS InChIKey InChI 1.03 MBBZMMPHUWSWHV-JRTVQGFMSA-N XPS SMILES_CANONICAL CACTVS 3.385 "CNC[C@@H](O)[C@H](O)[C@H](O)[C@@H](O)CO" XPS SMILES CACTVS 3.385 "CNC[CH](O)[CH](O)[CH](O)[CH](O)CO" XPS SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CNC[C@H]([C@@H]([C@@H]([C@H](CO)O)O)O)O" XPS SMILES "OpenEye OEToolkits" 2.0.7 "CNCC(C(C(C(CO)O)O)O)O" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier XPS "SYSTEMATIC NAME" ACDLabs 12.01 "6-deoxy-6-(methylamino)-D-galactitol" XPS "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{S},3~{R},4~{S},5~{R})-6-(methylamino)hexane-1,2,3,4,5-pentol" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site XPS "Create component" 2020-12-23 RCSB XPS "Initial release" 2021-09-22 RCSB ##