data_XQ5 # _chem_comp.id XQ5 _chem_comp.name "7-[(1~{S})-1-[4-(carbamimidamidomethyl)-1,2,3-triazol-1-yl]ethyl]-3-[3-fluoranyl-4-(methylsulfonylmethyl)phenyl]-1~{H}-indole-2-carboxylic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C23 H24 F N7 O4 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-06-08 _chem_comp.pdbx_modified_date 2024-06-21 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 513.545 _chem_comp.one_letter_code ? _chem_comp.three_letter_code XQ5 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8PB2 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal XQ5 C12 C1 C 0 1 Y N N N N N -20.376 -10.948 8.001 3.651 0.831 1.247 C12 XQ5 1 XQ5 C13 C2 C 0 1 Y N N N N N -19.846 -11.053 6.721 4.934 0.327 1.308 C13 XQ5 2 XQ5 C14 C3 C 0 1 Y N N N N N -20.104 -12.174 5.953 5.248 -0.854 0.661 C14 XQ5 3 XQ5 C15 C4 C 0 1 N N N N N N -19.531 -12.299 4.528 6.652 -1.398 0.732 C15 XQ5 4 XQ5 C17 C5 C 0 1 N N N N N N -20.705 -9.744 3.795 9.245 -1.508 -0.365 C17 XQ5 5 XQ5 C20 C6 C 0 1 Y N N N N N -20.894 -13.182 6.495 4.278 -1.539 -0.052 C20 XQ5 6 XQ5 N27 N1 N 0 1 Y N N N N N -24.721 -12.237 14.478 -4.418 0.782 0.004 N27 XQ5 7 XQ5 C01 C7 C 0 1 N N N N N N -22.559 -12.478 15.730 -4.082 1.958 2.122 C01 XQ5 8 XQ5 C02 C8 C 0 1 N N S N N N -23.282 -12.100 14.448 -3.431 1.499 0.816 C02 XQ5 9 XQ5 C03 C9 C 0 1 Y N N N N N -22.699 -12.865 13.234 -2.274 0.584 1.125 C03 XQ5 10 XQ5 C04 C10 C 0 1 Y N N N N N -22.431 -12.164 12.049 -0.987 0.924 0.715 C04 XQ5 11 XQ5 C06 C11 C 0 1 Y N N N N N -22.216 -10.632 10.528 0.885 1.862 -0.129 C06 XQ5 12 XQ5 C07 C12 C 0 1 N N N N N N -22.369 -9.269 9.897 1.764 2.814 -0.813 C07 XQ5 13 XQ5 C10 C13 C 0 1 Y N N N N N -21.738 -11.804 9.950 1.289 0.680 0.465 C10 XQ5 14 XQ5 C11 C14 C 0 1 Y N N N N N -21.179 -11.954 8.528 2.668 0.147 0.530 C11 XQ5 15 XQ5 C22 C15 C 0 1 Y N N N N N -21.423 -13.076 7.772 2.990 -1.045 -0.121 C22 XQ5 16 XQ5 C23 C16 C 0 1 Y N N N N N -21.884 -12.794 10.941 0.080 0.058 1.019 C23 XQ5 17 XQ5 C24 C17 C 0 1 Y N N N N N -21.597 -14.166 10.995 -0.158 -1.124 1.723 C24 XQ5 18 XQ5 C25 C18 C 0 1 Y N N N N N -21.857 -14.873 12.167 -1.429 -1.436 2.115 C25 XQ5 19 XQ5 C26 C19 C 0 1 Y N N N N N -22.403 -14.229 13.278 -2.487 -0.586 1.819 C26 XQ5 20 XQ5 C28 C20 C 0 1 Y N N N N N -25.531 -12.812 15.364 -5.403 -0.017 0.476 C28 XQ5 21 XQ5 C29 C21 C 0 1 Y N N N N N -26.853 -12.573 14.839 -6.073 -0.470 -0.609 C29 XQ5 22 XQ5 C30 C22 C 0 1 N N N N N N -28.184 -13.012 15.422 -7.261 -1.397 -0.613 C30 XQ5 23 XQ5 C32 C23 C 0 1 N N N N N N -29.934 -14.776 15.066 -9.715 -1.242 -0.677 C32 XQ5 24 XQ5 F21 F1 F 0 1 N N N N N N -21.156 -14.293 5.756 4.593 -2.693 -0.682 F21 XQ5 25 XQ5 N05 N2 N 0 1 Y N N N N N -22.602 -10.876 11.758 -0.479 1.999 0.026 N05 XQ5 26 XQ5 N31 N3 N 0 1 N N N N N N -28.737 -14.085 14.630 -8.495 -0.608 -0.664 N31 XQ5 27 XQ5 N33 N4 N 0 1 N N N N N N -30.541 -14.478 16.118 -9.778 -2.615 -0.641 N33 XQ5 28 XQ5 N34 N5 N 0 1 N N N N N N -30.448 -15.848 14.252 -10.813 -0.540 -0.723 N34 XQ5 29 XQ5 N35 N6 N 0 1 Y N N N N N -26.706 -11.884 13.712 -5.473 0.067 -1.677 N35 XQ5 30 XQ5 N36 N7 N 0 1 Y N N N N N -25.430 -11.684 13.521 -4.500 0.808 -1.280 N36 XQ5 31 XQ5 O08 O1 O 0 1 N N N N N N -22.223 -8.247 10.609 1.250 3.937 -1.357 O08 XQ5 32 XQ5 O09 O2 O 0 1 N N N N N N -22.834 -9.222 8.706 2.957 2.592 -0.891 O09 XQ5 33 XQ5 O18 O3 O 0 1 N N N N N N -20.324 -11.589 1.924 7.092 -1.238 -1.863 O18 XQ5 34 XQ5 O19 O4 O 0 1 N N N N N N -22.012 -12.082 3.505 7.760 0.668 -0.474 O19 XQ5 35 XQ5 S16 S1 S 0 1 N N N N N N -20.677 -11.505 3.344 7.628 -0.736 -0.646 S16 XQ5 36 XQ5 H121 H1 H 0 0 N N N N N N -20.161 -10.072 8.596 3.407 1.751 1.757 H121 XQ5 37 XQ5 H131 H2 H 0 0 N N N N N N -19.232 -10.258 6.325 5.694 0.857 1.863 H131 XQ5 38 XQ5 H152 H3 H 0 0 N N N N N N -19.415 -13.362 4.271 7.109 -1.102 1.676 H152 XQ5 39 XQ5 H151 H4 H 0 0 N N N N N N -18.551 -11.801 4.481 6.624 -2.486 0.668 H151 XQ5 40 XQ5 H172 H5 H 0 0 N N N N N N -20.967 -9.641 4.858 9.941 -1.187 -1.140 H172 XQ5 41 XQ5 H173 H6 H 0 0 N N N N N N -19.712 -9.305 3.618 9.626 -1.208 0.611 H173 XQ5 42 XQ5 H171 H7 H 0 0 N N N N N N -21.452 -9.220 3.181 9.141 -2.592 -0.397 H171 XQ5 43 XQ5 H013 H8 H 0 0 N N N N N N -22.992 -11.921 16.574 -4.919 2.619 1.899 H013 XQ5 44 XQ5 H011 H9 H 0 0 N N N N N N -22.669 -13.558 15.908 -4.444 1.089 2.673 H011 XQ5 45 XQ5 H012 H10 H 0 0 N N N N N N -21.492 -12.229 15.636 -3.349 2.491 2.727 H012 XQ5 46 XQ5 H021 H11 H 0 0 N N N N N N -23.061 -11.037 14.271 -3.070 2.368 0.266 H021 XQ5 47 XQ5 H221 H12 H 0 0 N N N N N N -22.028 -13.876 8.173 2.234 -1.579 -0.677 H221 XQ5 48 XQ5 H241 H13 H 0 0 N N N N N N -21.178 -14.670 10.136 0.659 -1.790 1.957 H241 XQ5 49 XQ5 H251 H14 H 0 0 N N N N N N -21.634 -15.929 12.216 -1.613 -2.351 2.659 H251 XQ5 50 XQ5 H261 H15 H 0 0 N N N N N N -22.598 -14.790 14.180 -3.485 -0.844 2.139 H261 XQ5 51 XQ5 H281 H16 H 0 0 N N N N N N -25.260 -13.337 16.268 -5.612 -0.247 1.510 H281 XQ5 52 XQ5 H302 H17 H 0 0 N N N N N N -28.881 -12.161 15.421 -7.210 -2.050 -1.484 H302 XQ5 53 XQ5 H301 H18 H 0 0 N N N N N N -28.033 -13.361 16.454 -7.254 -2.001 0.295 H301 XQ5 54 XQ5 H051 H19 H 0 0 N N N N N N -22.972 -10.192 12.387 -1.003 2.746 -0.304 H051 XQ5 55 XQ5 H311 H20 H 0 0 N N N N N N -28.292 -14.353 13.776 -8.451 0.360 -0.690 H311 XQ5 56 XQ5 H1 H21 H 0 1 N N N N N N -30.204 -13.736 16.697 -8.961 -3.136 -0.606 H1 XQ5 57 XQ5 H331 H22 H 0 0 N N N N N N -31.364 -14.982 16.380 -10.639 -3.061 -0.650 H331 XQ5 58 XQ5 H341 H23 H 0 0 N N N N N N -31.275 -16.252 14.643 -11.674 -0.987 -0.732 H341 XQ5 59 XQ5 H2 H24 H 0 1 N N N N N N -22.506 -7.480 10.125 1.906 4.502 -1.786 H2 XQ5 60 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal XQ5 O18 S16 DOUB N N 1 XQ5 S16 O19 DOUB N N 2 XQ5 S16 C17 SING N N 3 XQ5 S16 C15 SING N N 4 XQ5 C15 C14 SING N N 5 XQ5 F21 C20 SING N N 6 XQ5 C14 C20 DOUB Y N 7 XQ5 C14 C13 SING Y N 8 XQ5 C20 C22 SING Y N 9 XQ5 C13 C12 DOUB Y N 10 XQ5 C22 C11 DOUB Y N 11 XQ5 C12 C11 SING Y N 12 XQ5 C11 C10 SING N N 13 XQ5 O09 C07 DOUB N N 14 XQ5 C07 C06 SING N N 15 XQ5 C07 O08 SING N N 16 XQ5 C10 C06 DOUB Y N 17 XQ5 C10 C23 SING Y N 18 XQ5 C06 N05 SING Y N 19 XQ5 C23 C24 DOUB Y N 20 XQ5 C23 C04 SING Y N 21 XQ5 C24 C25 SING Y N 22 XQ5 N05 C04 SING Y N 23 XQ5 C04 C03 DOUB Y N 24 XQ5 C25 C26 DOUB Y N 25 XQ5 C03 C26 SING Y N 26 XQ5 C03 C02 SING N N 27 XQ5 N36 N35 DOUB Y N 28 XQ5 N36 N27 SING Y N 29 XQ5 N35 C29 SING Y N 30 XQ5 N34 C32 DOUB N N 31 XQ5 C02 N27 SING N N 32 XQ5 C02 C01 SING N N 33 XQ5 N27 C28 SING Y N 34 XQ5 N31 C32 SING N N 35 XQ5 N31 C30 SING N N 36 XQ5 C29 C28 DOUB Y N 37 XQ5 C29 C30 SING N N 38 XQ5 C32 N33 SING N N 39 XQ5 C12 H121 SING N N 40 XQ5 C13 H131 SING N N 41 XQ5 C15 H152 SING N N 42 XQ5 C15 H151 SING N N 43 XQ5 C17 H172 SING N N 44 XQ5 C17 H173 SING N N 45 XQ5 C17 H171 SING N N 46 XQ5 C01 H013 SING N N 47 XQ5 C01 H011 SING N N 48 XQ5 C01 H012 SING N N 49 XQ5 C02 H021 SING N N 50 XQ5 C22 H221 SING N N 51 XQ5 C24 H241 SING N N 52 XQ5 C25 H251 SING N N 53 XQ5 C26 H261 SING N N 54 XQ5 C28 H281 SING N N 55 XQ5 C30 H302 SING N N 56 XQ5 C30 H301 SING N N 57 XQ5 N05 H051 SING N N 58 XQ5 N31 H311 SING N N 59 XQ5 N33 H1 SING N N 60 XQ5 N33 H331 SING N N 61 XQ5 N34 H341 SING N N 62 XQ5 O08 H2 SING N N 63 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor XQ5 InChI InChI 1.06 "InChI=1S/C23H24FN7O4S/c1-12(31-10-15(29-30-31)9-27-23(25)26)16-4-3-5-17-19(21(22(32)33)28-20(16)17)13-6-7-14(18(24)8-13)11-36(2,34)35/h3-8,10,12,28H,9,11H2,1-2H3,(H,32,33)(H4,25,26,27)/t12-/m0/s1" XQ5 InChIKey InChI 1.06 CJYFTDZSIPERAZ-LBPRGKRZSA-N XQ5 SMILES_CANONICAL CACTVS 3.385 "C[C@H](n1cc(CNC(N)=N)nn1)c2cccc3c2[nH]c(C(O)=O)c3c4ccc(C[S](C)(=O)=O)c(F)c4" XQ5 SMILES CACTVS 3.385 "C[CH](n1cc(CNC(N)=N)nn1)c2cccc3c2[nH]c(C(O)=O)c3c4ccc(C[S](C)(=O)=O)c(F)c4" XQ5 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "[H]/N=C(/N)\NCc1cn(nn1)[C@@H](C)c2cccc3c2[nH]c(c3c4ccc(c(c4)F)CS(=O)(=O)C)C(=O)O" XQ5 SMILES "OpenEye OEToolkits" 2.0.7 "CC(c1cccc2c1[nH]c(c2c3ccc(c(c3)F)CS(=O)(=O)C)C(=O)O)n4cc(nn4)CNC(=N)N" # _pdbx_chem_comp_identifier.comp_id XQ5 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "7-[(1~{S})-1-[4-(carbamimidamidomethyl)-1,2,3-triazol-1-yl]ethyl]-3-[3-fluoranyl-4-(methylsulfonylmethyl)phenyl]-1~{H}-indole-2-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site XQ5 "Create component" 2023-06-08 PDBE XQ5 "Initial release" 2024-06-26 RCSB #