data_XQF # _chem_comp.id XQF _chem_comp.name "(2~{R})-~{N}-[4,4-bis(fluoranyl)cyclohexyl]-2-[(2-chloranyl-2-fluoranyl-ethanoyl)-[4-(trifluoromethyloxy)phenyl]amino]-2-pyrimidin-5-yl-propanamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C22 H21 Cl F6 N4 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-11-08 _chem_comp.pdbx_modified_date 2025-05-02 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 538.871 _chem_comp.one_letter_code ? _chem_comp.three_letter_code XQF _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8WZ0 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal XQF C4 C1 C 0 1 Y N N N N N -15.306 2.127 -44.163 3.927 -0.086 1.745 C4 XQF 1 XQF C5 C2 C 0 1 Y N N N N N -14.800 1.765 -42.922 2.619 0.354 1.682 C5 XQF 2 XQF C6 C3 C 0 1 Y N N N N N -15.575 1.927 -41.782 1.839 0.053 0.574 C6 XQF 3 XQF C7 C4 C 0 1 Y N N N N N -16.851 2.477 -41.897 2.373 -0.690 -0.470 C7 XQF 4 XQF C10 C5 C 0 1 N N N N N N -15.378 -0.811 -41.062 -1.480 0.616 -0.871 C10 XQF 5 XQF C13 C6 C 0 1 Y N N N N N -14.278 -0.269 -39.041 0.091 2.508 -0.785 C13 XQF 6 XQF C20 C7 C 0 1 N N S N N N -14.149 3.850 -40.316 -1.737 0.768 1.503 C20 XQF 7 XQF C26 C8 C 0 1 N N N N N N -16.778 -4.082 -41.851 -3.284 -2.595 -1.106 C26 XQF 8 XQF C28 C9 C 0 1 N N N N N N -17.128 -4.625 -44.280 -5.619 -2.618 -0.218 C28 XQF 9 XQF C1 C10 C 0 1 N N N N N N -17.065 2.258 -46.670 6.235 -2.012 -0.350 C1 XQF 10 XQF C2 C11 C 0 1 Y N N N N N -17.350 2.843 -43.127 3.681 -1.130 -0.405 C2 XQF 11 XQF C3 C12 C 0 1 Y N N N N N -16.592 2.664 -44.280 4.462 -0.824 0.700 C3 XQF 12 XQF N8 N1 N 0 1 N N N N N N -15.127 1.573 -40.489 0.512 0.499 0.510 N8 XQF 13 XQF C9 C13 C 0 1 N N R N N N -15.415 0.218 -39.941 -0.030 1.006 -0.754 C9 XQF 14 XQF N11 N2 N 0 1 N N N N N N -16.301 -1.789 -41.190 -1.854 -0.662 -0.661 N11 XQF 15 XQF C12 C14 C 0 1 N N N N N N -16.168 -2.754 -42.283 -3.233 -1.076 -0.932 C12 XQF 16 XQF C14 C15 C 0 1 Y N N N N N -12.957 -0.251 -39.516 0.689 3.194 0.260 C14 XQF 17 XQF N15 N3 N 0 1 Y N N N N N -11.958 -0.671 -38.756 0.782 4.512 0.195 N15 XQF 18 XQF C16 C16 C 0 1 Y N N N N N -12.197 -1.134 -37.547 0.315 5.172 -0.846 C16 XQF 19 XQF N17 N4 N 0 1 Y N N N N N -13.423 -1.186 -37.051 -0.260 4.553 -1.857 N17 XQF 20 XQF C18 C17 C 0 1 Y N N N N N -14.471 -0.774 -37.752 -0.388 3.236 -1.862 C18 XQF 21 XQF C19 C18 C 0 1 N N N N N N -14.489 2.510 -39.745 -0.266 0.462 1.610 C19 XQF 22 XQF F22 F1 F 0 1 N N N N N N -14.093 4.824 -39.339 -2.294 0.837 2.784 F22 XQF 23 XQF C23 C19 C 0 1 N N N N N N -16.782 0.263 -39.244 0.756 0.407 -1.922 C23 XQF 24 XQF O24 O1 O 0 1 N N N N N N -14.103 2.264 -38.627 0.219 0.182 2.686 O24 XQF 25 XQF O25 O2 O 0 1 N N N N N N -14.465 -0.800 -41.869 -2.312 1.452 -1.153 O25 XQF 26 XQF C27 C20 C 0 1 N N N N N N -16.561 -5.128 -42.948 -4.724 -3.027 -1.389 C27 XQF 27 XQF C29 C21 C 0 1 N N N N N N -16.579 -3.242 -44.651 -5.568 -1.099 -0.044 C29 XQF 28 XQF C30 C22 C 0 1 N N N N N N -16.878 -2.244 -43.535 -4.128 -0.666 0.239 C30 XQF 29 XQF F31 F2 F 0 1 N N N N N N -16.756 -5.528 -45.279 -6.936 -3.013 -0.477 F31 XQF 30 XQF F32 F3 F 0 1 N N N N N N -18.526 -4.563 -44.169 -5.168 -3.237 0.953 F32 XQF 31 XQF O33 O3 O 0 1 N N N N N N -17.126 3.057 -45.478 5.749 -1.258 0.762 O33 XQF 32 XQF F34 F4 F 0 1 N N N N N N -17.864 2.826 -47.667 7.566 -2.375 -0.121 F34 XQF 33 XQF F35 F5 F 0 1 N N N N N N -15.768 2.212 -47.151 5.457 -3.165 -0.507 F35 XQF 34 XQF F36 F6 F 0 1 N N N N N N -17.485 0.950 -46.442 6.156 -1.235 -1.510 F36 XQF 35 XQF H1 H1 H 0 1 N N N N N N -14.700 1.993 -45.047 4.534 0.147 2.607 H1 XQF 36 XQF H2 H2 H 0 1 N N N N N N -13.803 1.357 -42.844 2.204 0.932 2.495 H2 XQF 37 XQF H3 H3 H 0 1 N N N N N N -17.454 2.617 -41.012 1.766 -0.925 -1.332 H3 XQF 38 XQF H4 H4 H 0 1 N N N N N N -14.805 4.110 -41.160 -2.232 -0.019 0.933 H4 XQF 39 XQF H6 H6 H 0 1 N N N N N N -17.856 -3.951 -41.679 -2.646 -2.887 -1.941 H6 XQF 40 XQF H7 H7 H 0 1 N N N N N N -16.297 -4.421 -40.922 -2.932 -3.077 -0.194 H7 XQF 41 XQF H8 H8 H 0 1 N N N N N N -18.338 3.273 -43.197 4.096 -1.709 -1.217 H8 XQF 42 XQF H9 H9 H 0 1 N N N N N N -17.064 -1.853 -40.547 -1.209 -1.307 -0.331 H9 XQF 43 XQF H10 H10 H 0 1 N N N N N N -15.104 -2.909 -42.515 -3.584 -0.594 -1.844 H10 XQF 44 XQF H11 H11 H 0 1 N N N N N N -12.753 0.110 -40.513 1.074 2.660 1.116 H11 XQF 45 XQF H12 H12 H 0 1 N N N N N N -11.371 -1.481 -36.944 0.405 6.248 -0.870 H12 XQF 46 XQF H13 H13 H 0 1 N N N N N N -15.464 -0.828 -37.331 -0.856 2.735 -2.697 H13 XQF 47 XQF H14 H14 H 0 1 N N N N N N -16.762 1.018 -38.444 0.567 0.990 -2.824 H14 XQF 48 XQF H15 H15 H 0 1 N N N N N N -17.559 0.526 -39.977 1.821 0.428 -1.693 H15 XQF 49 XQF H16 H16 H 0 1 N N N N N N -17.006 -0.723 -38.811 0.438 -0.623 -2.083 H16 XQF 50 XQF H17 H17 H 0 1 N N N N N N -17.070 -6.061 -42.666 -5.076 -2.545 -2.301 H17 XQF 51 XQF H18 H18 H 0 1 N N N N N N -15.483 -5.318 -43.061 -4.761 -4.110 -1.513 H18 XQF 52 XQF H19 H19 H 0 1 N N N N N N -15.491 -3.309 -44.797 -5.919 -0.616 -0.956 H19 XQF 53 XQF H20 H20 H 0 1 N N N N N N -17.054 -2.900 -45.582 -6.206 -0.807 0.790 H20 XQF 54 XQF H21 H21 H 0 1 N N N N N N -16.498 -1.248 -43.806 -3.776 -1.148 1.151 H21 XQF 55 XQF H22 H22 H 0 1 N N N N N N -17.962 -2.187 -43.359 -4.091 0.416 0.363 H22 XQF 56 XQF CL1 CL1 CL 0 0 N N N N N N -12.511 3.620 -40.940 -1.963 2.348 0.664 CL1 XQF 57 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal XQF F34 C1 SING N N 1 XQF F35 C1 SING N N 2 XQF C1 F36 SING N N 3 XQF C1 O33 SING N N 4 XQF O33 C3 SING N N 5 XQF F31 C28 SING N N 6 XQF C29 C28 SING N N 7 XQF C29 C30 SING N N 8 XQF C28 F32 SING N N 9 XQF C28 C27 SING N N 10 XQF C3 C4 DOUB Y N 11 XQF C3 C2 SING Y N 12 XQF C4 C5 SING Y N 13 XQF C30 C12 SING N N 14 XQF C2 C7 DOUB Y N 15 XQF C27 C26 SING N N 16 XQF C5 C6 DOUB Y N 17 XQF C12 C26 SING N N 18 XQF C12 N11 SING N N 19 XQF C7 C6 SING Y N 20 XQF O25 C10 DOUB N N 21 XQF C6 N8 SING N N 22 XQF N11 C10 SING N N 23 XQF C10 C9 SING N N 24 XQF N8 C9 SING N N 25 XQF N8 C19 SING N N 26 XQF C20 C19 SING N N 27 XQF C20 F22 SING N N 28 XQF C9 C23 SING N N 29 XQF C9 C13 SING N N 30 XQF C19 O24 DOUB N N 31 XQF C14 C13 DOUB Y N 32 XQF C14 N15 SING Y N 33 XQF C13 C18 SING Y N 34 XQF N15 C16 DOUB Y N 35 XQF C18 N17 DOUB Y N 36 XQF C16 N17 SING Y N 37 XQF C4 H1 SING N N 38 XQF C5 H2 SING N N 39 XQF C7 H3 SING N N 40 XQF C20 H4 SING N N 41 XQF C26 H6 SING N N 42 XQF C26 H7 SING N N 43 XQF C2 H8 SING N N 44 XQF N11 H9 SING N N 45 XQF C12 H10 SING N N 46 XQF C14 H11 SING N N 47 XQF C16 H12 SING N N 48 XQF C18 H13 SING N N 49 XQF C23 H14 SING N N 50 XQF C23 H15 SING N N 51 XQF C23 H16 SING N N 52 XQF C27 H17 SING N N 53 XQF C27 H18 SING N N 54 XQF C29 H19 SING N N 55 XQF C29 H20 SING N N 56 XQF C30 H21 SING N N 57 XQF C30 H22 SING N N 58 XQF C20 CL1 SING N N 59 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor XQF InChI InChI 1.06 "InChI=1S/C22H21ClF6N4O3/c1-20(13-10-30-12-31-11-13,19(35)32-14-6-8-21(25,26)9-7-14)33(18(34)17(23)24)15-2-4-16(5-3-15)36-22(27,28)29/h2-5,10-12,14,17H,6-9H2,1H3,(H,32,35)/t17-,20-/m1/s1" XQF InChIKey InChI 1.06 IFNDNNAQPGBKRX-YLJYHZDGSA-N XQF SMILES_CANONICAL CACTVS 3.385 "C[C@](N(C(=O)[C@@H](F)Cl)c1ccc(OC(F)(F)F)cc1)(C(=O)NC2CCC(F)(F)CC2)c3cncnc3" XQF SMILES CACTVS 3.385 "C[C](N(C(=O)[CH](F)Cl)c1ccc(OC(F)(F)F)cc1)(C(=O)NC2CCC(F)(F)CC2)c3cncnc3" XQF SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@@](c1cncnc1)(C(=O)NC2CCC(CC2)(F)F)N(c3ccc(cc3)OC(F)(F)F)C(=O)C(F)Cl" XQF SMILES "OpenEye OEToolkits" 2.0.7 "CC(c1cncnc1)(C(=O)NC2CCC(CC2)(F)F)N(c3ccc(cc3)OC(F)(F)F)C(=O)C(F)Cl" # _pdbx_chem_comp_identifier.comp_id XQF _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{R})-~{N}-[4,4-bis(fluoranyl)cyclohexyl]-2-[(2-chloranyl-2-fluoranyl-ethanoyl)-[4-(trifluoromethyloxy)phenyl]amino]-2-pyrimidin-5-yl-propanamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site XQF "Create component" 2023-11-08 PDBJ XQF "Modify PCM" 2024-09-27 PDBE XQF "Initial release" 2025-05-07 RCSB # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id XQF _pdbx_chem_comp_pcm.modified_residue_id CYS _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C20 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom SG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #