data_XRI # _chem_comp.id XRI _chem_comp.name "5-tert-butyl-2-methyl-4-({5-[(5S)-2-oxa-7-azaspiro[4.4]nonane-7-carbonyl]-1H-pyrazol-3-yl}methoxy)benzonitrile" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H30 N4 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-06-08 _chem_comp.pdbx_modified_date 2024-12-13 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 422.520 _chem_comp.one_letter_code ? _chem_comp.three_letter_code XRI _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7G3E _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal XRI C10 C1 C 0 1 N N N N N N -12.092 8.066 43.155 -3.862 -2.154 -0.121 C10 XRI 1 XRI C11 C2 C 0 1 N N N N N N -11.243 8.421 41.917 -4.999 -3.175 -0.210 C11 XRI 2 XRI C13 C3 C 0 1 N N N N N N -11.633 8.986 44.316 -2.961 -2.286 -1.349 C13 XRI 3 XRI O14 O1 O 0 1 N N N N N N -13.213 7.015 45.539 -2.250 0.155 0.049 O14 XRI 4 XRI C15 C4 C 0 1 N N N N N N -13.777 6.549 46.773 -1.439 1.328 0.135 C15 XRI 5 XRI C16 C5 C 0 1 Y N N N N N -14.072 7.717 47.655 0.015 0.933 0.162 C16 XRI 6 XRI C17 C6 C 0 1 Y N N N N N -13.254 8.706 48.226 0.514 -0.371 0.112 C17 XRI 7 XRI C18 C7 C 0 1 Y N N N N N -14.124 9.516 48.931 1.891 -0.238 0.162 C18 XRI 8 XRI C21 C8 C 0 1 N N N N N N -14.036 10.705 49.802 2.884 -1.324 0.139 C21 XRI 9 XRI C24 C9 C 0 1 N N N N N N -11.505 10.898 49.631 5.293 -2.015 -0.049 C24 XRI 10 XRI C25 C10 C 0 1 N N N N N N -10.571 11.904 50.300 6.541 -1.311 0.547 C25 XRI 11 XRI C26 C11 C 0 1 N N S N N N -11.323 12.288 51.564 6.304 0.146 0.116 C26 XRI 12 XRI C27 C12 C 0 1 N N N N N N -11.119 11.195 52.676 7.020 1.131 1.045 C27 XRI 13 XRI C28 C13 C 0 1 N N N N N N -10.739 11.976 53.927 7.969 1.901 0.095 C28 XRI 14 XRI C1 C14 C 0 1 N N N N N N -11.889 2.404 44.580 -6.056 3.204 0.080 C1 XRI 15 XRI C2 C15 C 0 1 Y N N N N N -11.921 3.854 44.208 -5.485 1.810 0.028 C2 XRI 16 XRI C3 C16 C 0 1 Y N N N N N -12.555 4.750 45.056 -4.122 1.621 0.063 C3 XRI 17 XRI C4 C17 C 0 1 Y N N N N N -12.562 6.095 44.755 -3.595 0.336 0.015 C4 XRI 18 XRI C5 C18 C 0 1 Y N N N N N -12.002 6.582 43.574 -4.440 -0.763 -0.069 C5 XRI 19 XRI C6 C19 C 0 1 Y N N N N N -11.371 5.656 42.746 -5.805 -0.583 -0.105 C6 XRI 20 XRI C7 C20 C 0 1 Y N N N N N -11.298 4.313 43.041 -6.340 0.707 -0.051 C7 XRI 21 XRI C8 C21 C 0 1 N N N N N N -10.633 3.411 42.134 -7.759 0.898 -0.082 C8 XRI 22 XRI N9 N1 N 0 1 N N N N N N -10.128 2.651 41.443 -8.884 1.049 -0.107 N9 XRI 23 XRI C12 C22 C 0 1 N N N N N N -13.559 8.374 42.787 -3.042 -2.413 1.145 C12 XRI 24 XRI N19 N2 N 0 1 Y N N N N N -15.360 8.994 48.780 2.144 1.102 0.239 N19 XRI 25 XRI N20 N3 N 0 1 Y N N N N N -15.377 7.909 48.005 1.035 1.751 0.231 N20 XRI 26 XRI O22 O2 O 0 1 N N N N N N -15.103 11.082 50.257 2.518 -2.484 0.164 O22 XRI 27 XRI N23 N4 N 0 1 N N N N N N -12.849 11.284 50.096 4.199 -1.033 0.088 N23 XRI 28 XRI O29 O3 O 0 1 N N N N N N -11.000 13.333 53.672 7.367 1.775 -1.213 O29 XRI 29 XRI C30 C23 C 0 1 N N N N N N -10.751 13.546 52.287 6.870 0.417 -1.281 C30 XRI 30 XRI C31 C24 C 0 1 N N N N N N -12.741 12.442 50.993 4.785 0.317 0.161 C31 XRI 31 XRI H37 H1 H 0 1 N N N N N N -11.361 9.490 41.685 -5.641 -3.081 0.665 H37 XRI 32 XRI H38 H2 H 0 1 N N N N N N -10.184 8.206 42.125 -5.583 -2.990 -1.111 H38 XRI 33 XRI H39 H3 H 0 1 N N N N N N -11.578 7.820 41.058 -4.581 -4.181 -0.247 H39 XRI 34 XRI H44 H4 H 0 1 N N N N N N -11.703 10.038 44.001 -3.545 -2.102 -2.251 H44 XRI 35 XRI H45 H5 H 0 1 N N N N N N -12.279 8.822 45.191 -2.151 -1.559 -1.286 H45 XRI 36 XRI H43 H6 H 0 1 N N N N N N -10.591 8.751 44.580 -2.543 -3.293 -1.387 H43 XRI 37 XRI H47 H7 H 0 1 N N N N N N -14.708 6.000 46.567 -1.626 1.964 -0.730 H47 XRI 38 XRI H46 H8 H 0 1 N N N N N N -13.061 5.882 47.275 -1.684 1.873 1.047 H46 XRI 39 XRI H17 H9 H 0 1 N N N N N N -12.183 8.810 48.134 -0.053 -1.287 0.048 H17 XRI 40 XRI H50 H10 H 0 1 N N N N N N -11.263 9.872 49.946 5.458 -2.254 -1.099 H50 XRI 41 XRI H51 H11 H 0 1 N N N N N N -11.436 10.971 48.536 5.064 -2.920 0.514 H51 XRI 42 XRI H52 H12 H 0 1 N N N N N N -9.602 11.443 50.542 6.558 -1.399 1.633 H52 XRI 43 XRI H53 H13 H 0 1 N N N N N N -10.409 12.781 49.656 7.458 -1.704 0.109 H53 XRI 44 XRI H54 H14 H 0 1 N N N N N N -12.049 10.631 52.839 6.305 1.811 1.507 H54 XRI 45 XRI H55 H15 H 0 1 N N N N N N -10.314 10.501 52.393 7.589 0.596 1.805 H55 XRI 46 XRI H56 H16 H 0 1 N N N N N N -11.340 11.632 54.782 8.028 2.950 0.386 H56 XRI 47 XRI H57 H17 H 0 1 N N N N N N -9.671 11.834 54.149 8.961 1.449 0.101 H57 XRI 48 XRI H34 H18 H 0 1 N N N N N N -12.766 1.896 44.153 -6.160 3.592 -0.933 H34 XRI 49 XRI H33 H19 H 0 1 N N N N N N -10.971 1.944 44.185 -7.034 3.178 0.561 H33 XRI 50 XRI H32 H20 H 0 1 N N N N N N -11.906 2.306 45.676 -5.387 3.849 0.650 H32 XRI 51 XRI H35 H21 H 0 1 N N N N N N -13.043 4.394 45.951 -3.461 2.473 0.128 H35 XRI 52 XRI H36 H22 H 0 1 N N N N N N -10.918 6.008 41.831 -6.462 -1.439 -0.171 H36 XRI 53 XRI H40 H23 H 0 1 N N N N N N -13.648 9.428 42.485 -2.625 -3.419 1.107 H40 XRI 54 XRI H41 H24 H 0 1 N N N N N N -13.872 7.726 41.955 -2.233 -1.686 1.208 H41 XRI 55 XRI H42 H25 H 0 1 N N N N N N -14.203 8.187 43.659 -3.685 -2.319 2.020 H42 XRI 56 XRI H19 H26 H 0 1 N N N N N N -16.178 9.381 49.205 3.026 1.503 0.287 H19 XRI 57 XRI H59 H27 H 0 1 N N N N N N -9.671 13.639 52.100 7.682 -0.275 -1.504 H59 XRI 58 XRI H58 H28 H 0 1 N N N N N N -11.263 14.455 51.940 6.084 0.337 -2.032 H58 XRI 59 XRI H61 H29 H 0 1 N N N N N N -12.846 13.386 50.438 4.492 0.800 1.093 H61 XRI 60 XRI H60 H30 H 0 1 N N N N N N -13.498 12.399 51.790 4.451 0.914 -0.688 H60 XRI 61 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal XRI C1 C2 SING N N 1 XRI C2 C3 DOUB Y N 2 XRI C2 C7 SING Y N 3 XRI C3 C4 SING Y N 4 XRI C4 C5 DOUB Y N 5 XRI C4 O14 SING N N 6 XRI C5 C6 SING Y N 7 XRI C5 C10 SING N N 8 XRI C6 C7 DOUB Y N 9 XRI C7 C8 SING N N 10 XRI C8 N9 TRIP N N 11 XRI C10 C11 SING N N 12 XRI C10 C12 SING N N 13 XRI C10 C13 SING N N 14 XRI O14 C15 SING N N 15 XRI C15 C16 SING N N 16 XRI C16 C17 SING Y N 17 XRI C16 N20 DOUB Y N 18 XRI C17 C18 DOUB Y N 19 XRI C18 N19 SING Y N 20 XRI C18 C21 SING N N 21 XRI N19 N20 SING Y N 22 XRI C21 O22 DOUB N N 23 XRI C21 N23 SING N N 24 XRI N23 C24 SING N N 25 XRI N23 C31 SING N N 26 XRI C24 C25 SING N N 27 XRI C25 C26 SING N N 28 XRI C26 C27 SING N N 29 XRI C26 C30 SING N N 30 XRI C26 C31 SING N N 31 XRI C27 C28 SING N N 32 XRI C28 O29 SING N N 33 XRI O29 C30 SING N N 34 XRI C11 H37 SING N N 35 XRI C11 H38 SING N N 36 XRI C11 H39 SING N N 37 XRI C13 H44 SING N N 38 XRI C13 H45 SING N N 39 XRI C13 H43 SING N N 40 XRI C15 H47 SING N N 41 XRI C15 H46 SING N N 42 XRI C17 H17 SING N N 43 XRI C24 H50 SING N N 44 XRI C24 H51 SING N N 45 XRI C25 H52 SING N N 46 XRI C25 H53 SING N N 47 XRI C27 H54 SING N N 48 XRI C27 H55 SING N N 49 XRI C28 H56 SING N N 50 XRI C28 H57 SING N N 51 XRI C1 H34 SING N N 52 XRI C1 H33 SING N N 53 XRI C1 H32 SING N N 54 XRI C3 H35 SING N N 55 XRI C6 H36 SING N N 56 XRI C12 H40 SING N N 57 XRI C12 H41 SING N N 58 XRI C12 H42 SING N N 59 XRI N19 H19 SING N N 60 XRI C30 H59 SING N N 61 XRI C30 H58 SING N N 62 XRI C31 H61 SING N N 63 XRI C31 H60 SING N N 64 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor XRI SMILES ACDLabs 12.01 "CC(C)(C)c1cc(C#N)c(C)cc1OCc1cc([NH]n1)C(=O)N1CCC2(CCOC2)C1" XRI InChI InChI 1.06 "InChI=1S/C24H30N4O3/c1-16-9-21(19(23(2,3)4)10-17(16)12-25)31-13-18-11-20(27-26-18)22(29)28-7-5-24(14-28)6-8-30-15-24/h9-11H,5-8,13-15H2,1-4H3,(H,26,27)/t24-/m0/s1" XRI InChIKey InChI 1.06 RYNYQPKWTQAPAX-DEOSSOPVSA-N XRI SMILES_CANONICAL CACTVS 3.385 "Cc1cc(OCc2cc([nH]n2)C(=O)N3CC[C@]4(CCOC4)C3)c(cc1C#N)C(C)(C)C" XRI SMILES CACTVS 3.385 "Cc1cc(OCc2cc([nH]n2)C(=O)N3CC[C]4(CCOC4)C3)c(cc1C#N)C(C)(C)C" XRI SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1cc(c(cc1C#N)C(C)(C)C)OCc2cc([nH]n2)C(=O)N3CC[C@@]4(C3)CCOC4" XRI SMILES "OpenEye OEToolkits" 2.0.7 "Cc1cc(c(cc1C#N)C(C)(C)C)OCc2cc([nH]n2)C(=O)N3CCC4(C3)CCOC4" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier XRI "SYSTEMATIC NAME" ACDLabs 12.01 "5-tert-butyl-2-methyl-4-({5-[(5S)-2-oxa-7-azaspiro[4.4]nonane-7-carbonyl]-1H-pyrazol-3-yl}methoxy)benzonitrile" XRI "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "5-~{tert}-butyl-2-methyl-4-[[5-[[(5~{S})-2-oxa-7-azaspiro[4.4]nonan-7-yl]carbonyl]-1~{H}-pyrazol-3-yl]methoxy]benzenecarbonitrile" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site XRI "Create component" 2023-06-08 RCSB XRI "Initial release" 2024-12-18 RCSB #