data_XSI # _chem_comp.id XSI _chem_comp.name "N-{5-[4-(2-amino-4-oxo-3,4-dihydrothieno[2,3-d]pyrimidin-6-yl)butyl]pyridine-2-carbonyl}-L-glutamic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C21 H23 N5 O6 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-12-06 _chem_comp.pdbx_modified_date 2023-05-05 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 473.502 _chem_comp.one_letter_code ? _chem_comp.three_letter_code XSI _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8FDY _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal XSI C12 C1 C 0 1 Y N N -23.923 11.513 34.759 -3.438 -0.891 0.785 C12 XSI 1 XSI C14 C2 C 0 1 Y N N -24.206 12.434 33.763 -2.625 -1.744 1.528 C14 XSI 2 XSI C15 C3 C 0 1 Y N N -26.210 11.098 35.049 -1.679 0.551 0.400 C15 XSI 3 XSI C16 C4 C 0 1 Y N N -25.496 12.674 33.426 -1.289 -1.419 1.699 C16 XSI 4 XSI C21 C5 C 0 1 N N N -20.141 11.976 37.422 -7.869 0.555 -0.571 C21 XSI 5 XSI C22 C6 C 0 1 N N N -18.808 12.256 36.729 -7.823 1.442 0.675 C22 XSI 6 XSI C17 C7 C 0 1 N N N -22.481 11.217 35.163 -4.869 -1.223 0.592 C17 XSI 7 XSI C23 C8 C 0 1 N N N -17.940 13.190 37.567 -8.603 2.707 0.420 C23 XSI 8 XSI N11 N1 N 0 1 N N N -24.518 9.368 25.718 10.901 1.741 -0.283 N11 XSI 9 XSI N13 N2 N 0 1 Y N N -24.926 10.859 35.384 -2.943 0.219 0.252 N13 XSI 10 XSI C20 C9 C 0 1 N N S -20.793 10.678 36.956 -7.077 -0.728 -0.313 C20 XSI 11 XSI C02 C10 C 0 1 N N N -24.918 10.530 26.484 9.736 1.023 -0.179 C02 XSI 12 XSI C04 C11 C 0 1 N N N -24.539 12.716 27.087 8.603 -0.867 0.644 C04 XSI 13 XSI C05 C12 C 0 1 Y N N -26.188 13.713 28.709 6.081 -0.965 -0.011 C05 XSI 14 XSI C06 C13 C 0 1 Y N N -27.343 13.352 29.410 5.190 -0.263 -0.684 C06 XSI 15 XSI C08 C14 C 0 1 Y N N -25.654 12.675 27.896 7.413 -0.390 0.018 C08 XSI 16 XSI C09 C15 C 0 1 Y N N -26.384 11.483 27.954 7.483 0.806 -0.692 C09 XSI 17 XSI C26 C16 C 0 1 N N N -20.770 9.628 38.070 -7.223 -1.655 -1.492 C26 XSI 18 XSI C29 C17 C 0 1 N N N -28.126 14.243 30.362 3.744 -0.656 -0.845 C29 XSI 19 XSI C30 C18 C 0 1 N N N -27.701 13.932 31.792 2.923 -0.059 0.300 C30 XSI 20 XSI C31 C19 C 0 1 N N N -28.130 12.524 32.197 1.455 -0.457 0.137 C31 XSI 21 XSI C32 C20 C 0 1 N N N -27.959 12.272 33.691 0.634 0.139 1.282 C32 XSI 22 XSI C33 C21 C 0 1 Y N N -26.502 12.014 34.058 -0.812 -0.253 1.122 C33 XSI 23 XSI N01 N3 N 0 1 N N N -25.997 10.442 27.247 8.653 1.473 -0.764 N01 XSI 24 XSI N03 N4 N 0 1 N N N -24.192 11.638 26.395 9.734 -0.144 0.527 N03 XSI 25 XSI N19 N5 N 0 1 N N N -22.161 10.959 36.558 -5.662 -0.400 -0.122 N19 XSI 26 XSI O10 O1 O 0 1 N N N -23.899 13.713 27.016 8.596 -1.908 1.277 O10 XSI 27 XSI O18 O2 O 0 1 N N N -21.629 11.189 34.340 -5.328 -2.239 1.077 O18 XSI 28 XSI O24 O3 O 0 1 N N N -16.974 13.808 37.046 -9.139 2.880 -0.649 O24 XSI 29 XSI O25 O4 O 0 1 N N N -18.202 13.343 38.788 -8.701 3.639 1.380 O25 XSI 30 XSI O27 O5 O 0 1 N N N -21.801 8.950 38.318 -6.245 -2.004 -2.110 O27 XSI 31 XSI O28 O6 O 0 1 N N N -19.722 9.431 38.746 -8.439 -2.091 -1.856 O28 XSI 32 XSI S07 S1 S 0 1 Y N N -27.678 11.744 29.016 5.903 1.185 -1.368 S07 XSI 33 XSI H1 H1 H 0 1 N N N -23.405 12.956 33.260 -3.031 -2.645 1.964 H1 XSI 34 XSI H2 H2 H 0 1 N N N -27.008 10.574 35.554 -1.312 1.463 -0.048 H2 XSI 35 XSI H3 H3 H 0 1 N N N -25.726 13.392 32.653 -0.634 -2.061 2.271 H3 XSI 36 XSI H4 H4 H 0 1 N N N -19.966 11.911 38.506 -8.904 0.304 -0.801 H4 XSI 37 XSI H5 H5 H 0 1 N N N -20.828 12.809 37.211 -7.429 1.090 -1.414 H5 XSI 38 XSI H6 H6 H 0 1 N N N -18.274 11.306 36.580 -8.263 0.908 1.517 H6 XSI 39 XSI H7 H7 H 0 1 N N N -19.002 12.725 35.753 -6.788 1.694 0.904 H7 XSI 40 XSI H8 H8 H 0 1 N N N -25.053 8.525 25.773 10.916 2.570 -0.786 H8 XSI 41 XSI H9 H9 H 0 1 N N N -23.707 9.409 25.134 11.709 1.419 0.145 H9 XSI 42 XSI H10 H10 H 0 1 N N N -20.229 10.289 36.095 -7.460 -1.217 0.583 H10 XSI 43 XSI H11 H11 H 0 1 N N N -25.741 14.694 28.779 5.837 -1.892 0.485 H11 XSI 44 XSI H12 H12 H 0 1 N N N -27.916 15.299 30.136 3.368 -0.278 -1.796 H12 XSI 45 XSI H13 H13 H 0 1 N N N -29.203 14.050 30.247 3.658 -1.742 -0.826 H13 XSI 46 XSI H14 H14 H 0 1 N N N -26.606 14.010 31.867 3.299 -0.436 1.251 H14 XSI 47 XSI H15 H15 H 0 1 N N N -28.168 14.660 32.472 3.009 1.028 0.281 H15 XSI 48 XSI H16 H16 H 0 1 N N N -29.190 12.388 31.935 1.079 -0.080 -0.814 H16 XSI 49 XSI H17 H17 H 0 1 N N N -27.519 11.796 31.644 1.369 -1.544 0.156 H17 XSI 50 XSI H18 H18 H 0 1 N N N -28.315 13.154 34.244 1.010 -0.238 2.234 H18 XSI 51 XSI H19 H19 H 0 1 N N N -28.559 11.395 33.975 0.720 1.226 1.263 H19 XSI 52 XSI H20 H20 H 0 1 N N N -23.384 11.660 25.807 10.552 -0.455 0.947 H20 XSI 53 XSI H21 H21 H 0 1 N N N -22.886 10.975 37.246 -5.296 0.411 -0.509 H21 XSI 54 XSI H22 H22 H 0 1 N N N -17.582 13.953 39.171 -9.211 4.433 1.170 H22 XSI 55 XSI H23 H23 H 0 1 N N N -19.882 8.749 39.388 -8.482 -2.684 -2.619 H23 XSI 56 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal XSI N11 C02 SING N N 1 XSI N03 C02 SING N N 2 XSI N03 C04 SING N N 3 XSI C02 N01 DOUB N N 4 XSI O10 C04 DOUB N N 5 XSI C04 C08 SING N N 6 XSI N01 C09 SING N N 7 XSI C08 C09 DOUB Y N 8 XSI C08 C05 SING Y N 9 XSI C09 S07 SING Y N 10 XSI C05 C06 DOUB Y N 11 XSI S07 C06 SING Y N 12 XSI C06 C29 SING N N 13 XSI C29 C30 SING N N 14 XSI C30 C31 SING N N 15 XSI C31 C32 SING N N 16 XSI C16 C14 DOUB Y N 17 XSI C16 C33 SING Y N 18 XSI C32 C33 SING N N 19 XSI C14 C12 SING Y N 20 XSI C33 C15 DOUB Y N 21 XSI O18 C17 DOUB N N 22 XSI C12 C17 SING N N 23 XSI C12 N13 DOUB Y N 24 XSI C15 N13 SING Y N 25 XSI C17 N19 SING N N 26 XSI N19 C20 SING N N 27 XSI C22 C21 SING N N 28 XSI C22 C23 SING N N 29 XSI C20 C21 SING N N 30 XSI C20 C26 SING N N 31 XSI O24 C23 DOUB N N 32 XSI C23 O25 SING N N 33 XSI C26 O27 DOUB N N 34 XSI C26 O28 SING N N 35 XSI C14 H1 SING N N 36 XSI C15 H2 SING N N 37 XSI C16 H3 SING N N 38 XSI C21 H4 SING N N 39 XSI C21 H5 SING N N 40 XSI C22 H6 SING N N 41 XSI C22 H7 SING N N 42 XSI N11 H8 SING N N 43 XSI N11 H9 SING N N 44 XSI C20 H10 SING N N 45 XSI C05 H11 SING N N 46 XSI C29 H12 SING N N 47 XSI C29 H13 SING N N 48 XSI C30 H14 SING N N 49 XSI C30 H15 SING N N 50 XSI C31 H16 SING N N 51 XSI C31 H17 SING N N 52 XSI C32 H18 SING N N 53 XSI C32 H19 SING N N 54 XSI N03 H20 SING N N 55 XSI N19 H21 SING N N 56 XSI O25 H22 SING N N 57 XSI O28 H23 SING N N 58 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor XSI SMILES ACDLabs 12.01 "O=C(O)C(CCC(=O)O)NC(=O)c1ccc(cn1)CCCCc1cc2C(=O)NC(N)=Nc2s1" XSI InChI InChI 1.06 "InChI=1S/C21H23N5O6S/c22-21-25-17(29)13-9-12(33-19(13)26-21)4-2-1-3-11-5-6-14(23-10-11)18(30)24-15(20(31)32)7-8-16(27)28/h5-6,9-10,15H,1-4,7-8H2,(H,24,30)(H,27,28)(H,31,32)(H3,22,25,26,29)/t15-/m0/s1" XSI InChIKey InChI 1.06 BKEFFQOOMQZMDH-HNNXBMFYSA-N XSI SMILES_CANONICAL CACTVS 3.385 "NC1=Nc2sc(CCCCc3ccc(nc3)C(=O)N[C@@H](CCC(O)=O)C(O)=O)cc2C(=O)N1" XSI SMILES CACTVS 3.385 "NC1=Nc2sc(CCCCc3ccc(nc3)C(=O)N[CH](CCC(O)=O)C(O)=O)cc2C(=O)N1" XSI SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(ncc1CCCCc2cc3c(s2)N=C(NC3=O)N)C(=O)N[C@@H](CCC(=O)O)C(=O)O" XSI SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(ncc1CCCCc2cc3c(s2)N=C(NC3=O)N)C(=O)NC(CCC(=O)O)C(=O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier XSI "SYSTEMATIC NAME" ACDLabs 12.01 "N-{5-[4-(2-amino-4-oxo-3,4-dihydrothieno[2,3-d]pyrimidin-6-yl)butyl]pyridine-2-carbonyl}-L-glutamic acid" XSI "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{S})-2-[[5-[4-(2-azanyl-4-oxidanylidene-3~{H}-thieno[2,3-d]pyrimidin-6-yl)butyl]pyridin-2-yl]carbonylamino]pentanedioic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site XSI "Create component" 2022-12-06 RCSB XSI "Initial release" 2023-05-10 RCSB #