data_XSM # _chem_comp.id XSM _chem_comp.name "(2R)-4-borono-2-{[(1H-imidazol-4-yl)methyl]amino}butanoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C8 H14 B N3 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-01-10 _chem_comp.pdbx_modified_date 2022-01-07 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 227.025 _chem_comp.one_letter_code ? _chem_comp.three_letter_code XSM _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7LA5 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal XSM CAO C1 C 0 1 Y N N -22.241 -28.514 -6.121 3.742 -0.165 0.435 CAO XSM 1 XSM NAP N1 N 0 1 Y N N -22.347 -29.677 -5.465 4.598 0.875 0.681 NAP XSM 2 XSM CAQ C2 C 0 1 Y N N -23.560 -29.742 -4.920 4.100 1.960 0.049 CAQ XSM 3 XSM NAR N2 N 0 1 Y N N -24.222 -28.623 -5.230 2.996 1.620 -0.558 NAR XSM 4 XSM CAN C3 C 0 1 Y N N -23.402 -27.879 -5.970 2.751 0.320 -0.338 CAN XSM 5 XSM CAM C4 C 0 1 N N N -23.726 -26.499 -6.561 1.574 -0.461 -0.862 CAM XSM 6 XSM NAF N3 N 0 1 N N N -24.701 -26.555 -7.674 0.430 -0.289 0.042 NAF XSM 7 XSM CAD C5 C 0 1 N N R -24.511 -25.481 -8.672 -0.739 -1.038 -0.439 CAD XSM 8 XSM CAB C6 C 0 1 N N N -24.717 -24.062 -8.032 -0.655 -2.463 0.044 CAB XSM 9 XSM OAA O1 O 0 1 N N N -24.234 -23.854 -6.895 -1.621 -3.338 -0.277 OAA XSM 10 XSM OAC O2 O 0 1 N N N -25.320 -23.206 -8.707 0.282 -2.818 0.719 OAC XSM 11 XSM CAG C7 C 0 1 N N N -23.083 -25.556 -9.259 -2.016 -0.392 0.100 CAG XSM 12 XSM CAH C8 C 0 1 N N N -22.714 -26.984 -9.781 -2.165 1.012 -0.490 CAH XSM 13 XSM BAI B1 B 0 1 N N N -21.722 -27.080 -10.870 -3.476 1.676 0.062 BAI XSM 14 XSM OAL O3 O 0 1 N N N -20.481 -26.585 -10.482 -3.548 3.086 0.217 OAL XSM 15 XSM OAK O4 O 0 1 N N N -21.630 -28.352 -11.402 -4.591 0.866 0.407 OAK XSM 16 XSM H1 H1 H 0 1 N N N -21.380 -28.159 -6.667 3.844 -1.180 0.789 H1 XSM 17 XSM H2 H2 H 0 1 N N N -21.636 -30.377 -5.396 5.410 0.840 1.210 H2 XSM 18 XSM H3 H3 H 0 1 N N N -23.944 -30.560 -4.328 4.542 2.945 0.046 H3 XSM 19 XSM H5 H5 H 0 1 N N N -22.794 -26.051 -6.935 1.311 -0.098 -1.856 H5 XSM 20 XSM H6 H6 H 0 1 N N N -24.142 -25.866 -5.763 1.836 -1.518 -0.919 H6 XSM 21 XSM H7 H7 H 0 1 N N N -25.622 -26.475 -7.293 0.208 0.688 0.162 H7 XSM 22 XSM H9 H9 H 0 1 N N N -25.237 -25.603 -9.490 -0.756 -1.024 -1.529 H9 XSM 23 XSM H10 H10 H 0 1 N N N -24.401 -22.954 -6.639 -1.524 -4.241 0.056 H10 XSM 24 XSM H11 H11 H 0 1 N N N -22.366 -25.273 -8.475 -2.877 -0.998 -0.183 H11 XSM 25 XSM H12 H12 H 0 1 N N N -23.010 -24.846 -10.096 -1.960 -0.325 1.186 H12 XSM 26 XSM H13 H13 H 0 1 N N N -23.642 -27.453 -10.139 -1.304 1.618 -0.208 H13 XSM 27 XSM H14 H14 H 0 1 N N N -22.321 -27.555 -8.927 -2.222 0.946 -1.577 H14 XSM 28 XSM H15 H15 H 0 1 N N N -20.586 -25.712 -10.123 -4.394 3.401 0.564 H15 XSM 29 XSM H16 H16 H 0 1 N N N -22.495 -28.654 -11.654 -4.448 -0.080 0.268 H16 XSM 30 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal XSM OAK BAI SING N N 1 XSM BAI OAL SING N N 2 XSM BAI CAH SING N N 3 XSM CAH CAG SING N N 4 XSM CAG CAD SING N N 5 XSM OAC CAB DOUB N N 6 XSM CAD CAB SING N N 7 XSM CAD NAF SING N N 8 XSM CAB OAA SING N N 9 XSM NAF CAM SING N N 10 XSM CAM CAN SING N N 11 XSM CAO CAN DOUB Y N 12 XSM CAO NAP SING Y N 13 XSM CAN NAR SING Y N 14 XSM NAP CAQ SING Y N 15 XSM NAR CAQ DOUB Y N 16 XSM CAO H1 SING N N 17 XSM NAP H2 SING N N 18 XSM CAQ H3 SING N N 19 XSM CAM H5 SING N N 20 XSM CAM H6 SING N N 21 XSM NAF H7 SING N N 22 XSM CAD H9 SING N N 23 XSM OAA H10 SING N N 24 XSM CAG H11 SING N N 25 XSM CAG H12 SING N N 26 XSM CAH H13 SING N N 27 XSM CAH H14 SING N N 28 XSM OAL H15 SING N N 29 XSM OAK H16 SING N N 30 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor XSM SMILES ACDLabs 12.01 "c1c(ncn1)CNC(C(O)=O)CCB(O)O" XSM InChI InChI 1.03 "InChI=1S/C8H14BN3O4/c13-8(14)7(1-2-9(15)16)11-4-6-3-10-5-12-6/h3,5,7,11,15-16H,1-2,4H2,(H,10,12)(H,13,14)/t7-/m1/s1" XSM InChIKey InChI 1.03 JBISBMUZBNLAPG-SSDOTTSWSA-N XSM SMILES_CANONICAL CACTVS 3.385 "OB(O)CC[C@@H](NCc1c[nH]cn1)C(O)=O" XSM SMILES CACTVS 3.385 "OB(O)CC[CH](NCc1c[nH]cn1)C(O)=O" XSM SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "B(CC[C@H](C(=O)O)NCc1c[nH]cn1)(O)O" XSM SMILES "OpenEye OEToolkits" 2.0.7 "B(CCC(C(=O)O)NCc1c[nH]cn1)(O)O" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier XSM "SYSTEMATIC NAME" ACDLabs 12.01 "(2R)-4-borono-2-{[(1H-imidazol-4-yl)methyl]amino}butanoic acid" XSM "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{R})-4-(dihydroxyboranyl)-2-(1~{H}-imidazol-4-ylmethylamino)butanoic acid" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site XSM "Create component" 2021-01-10 RCSB XSM "Initial release" 2022-01-12 RCSB ##