data_XSO # _chem_comp.id XSO _chem_comp.name "N-{5-[4-(2-amino-4-oxo-1,4-dihydrothieno[2,3-d]pyrimidin-6-yl)butyl]-3-fluoropyridine-2-carbonyl}-L-glutamic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C21 H22 F N5 O6 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-12-06 _chem_comp.pdbx_modified_date 2023-05-05 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 491.493 _chem_comp.one_letter_code ? _chem_comp.three_letter_code XSO _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8FDZ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal XSO C17 C1 C 0 1 N N N 25.616 -9.103 -15.383 -4.865 -1.209 0.217 C17 XSO 1 XSO C12 C2 C 0 1 Y N N 25.449 -10.425 -16.122 -3.408 -1.269 -0.038 C12 XSO 2 XSO C16 C3 C 0 1 Y N N 24.418 -12.533 -16.728 -1.284 -2.343 0.263 C16 XSO 3 XSO C15 C4 C 0 1 Y N N 26.405 -11.613 -17.741 -1.543 -0.359 -1.048 C15 XSO 4 XSO C14 C5 C 0 1 Y N N 24.439 -11.373 -15.947 -2.650 -2.303 0.513 C14 XSO 5 XSO C02 C6 C 0 1 N N N 24.377 -10.807 -24.580 9.906 0.248 -0.285 C02 XSO 6 XSO C04 C7 C 0 1 N N N 24.193 -13.019 -23.948 8.253 1.717 -0.966 C04 XSO 7 XSO C05 C8 C 0 1 Y N N 25.977 -13.874 -22.314 5.821 1.147 -0.060 C05 XSO 8 XSO C06 C9 C 0 1 Y N N 27.104 -13.404 -21.626 5.208 0.251 0.692 C06 XSO 9 XSO C08 C10 C 0 1 Y N N 25.344 -12.867 -23.152 7.248 0.938 -0.212 C08 XSO 10 XSO C09 C11 C 0 1 Y N N 25.968 -11.613 -23.116 7.690 -0.178 0.474 C09 XSO 11 XSO C20 C12 C 0 1 N N S 27.336 -7.220 -15.114 -7.045 -0.161 -0.070 C20 XSO 12 XSO C21 C13 C 0 1 N N N 28.774 -7.319 -14.653 -7.532 1.283 -0.212 C21 XSO 13 XSO C22 C14 C 0 1 N N N 28.919 -8.108 -13.354 -6.901 2.145 0.883 C22 XSO 14 XSO C23 C15 C 0 1 N N N 30.391 -8.448 -13.169 -7.381 3.566 0.742 C23 XSO 15 XSO C26 C16 C 0 1 N N N 27.334 -6.260 -16.281 -7.760 -1.033 -1.069 C26 XSO 16 XSO C29 C17 C 0 1 N N N 28.016 -14.153 -20.693 3.732 0.258 0.994 C29 XSO 17 XSO C30 C18 C 0 1 N N N 28.124 -13.302 -19.460 2.990 -0.553 -0.070 C30 XSO 18 XSO C31 C19 C 0 1 N N N 27.232 -13.963 -18.433 1.491 -0.546 0.236 C31 XSO 19 XSO C32 C20 C 0 1 N N N 25.735 -13.702 -18.635 0.749 -1.357 -0.828 C32 XSO 20 XSO C33 C21 C 0 1 Y N N 25.450 -12.585 -17.650 -0.727 -1.351 -0.526 C33 XSO 21 XSO F34 F1 F 0 1 N N N 23.478 -11.145 -15.001 -3.235 -3.250 1.278 F34 XSO 22 XSO N01 N1 N 0 1 N N N 25.469 -10.607 -23.836 9.031 -0.507 0.424 N01 XSO 23 XSO N03 N2 N 0 1 N N N 23.746 -11.978 -24.636 9.530 1.317 -0.952 N03 XSO 24 XSO N11 N3 N 0 1 N N N 23.833 -9.724 -25.374 11.227 -0.112 -0.303 N11 XSO 25 XSO N13 N4 N 0 1 Y N N 26.396 -10.563 -16.998 -2.833 -0.340 -0.793 N13 XSO 26 XSO N19 N5 N 0 1 N N N 26.904 -8.482 -15.646 -5.602 -0.216 -0.317 N19 XSO 27 XSO O10 O1 O 0 1 N N N 23.530 -14.257 -24.024 7.923 2.713 -1.591 O10 XSO 28 XSO O18 O2 O 0 1 N N N 24.764 -8.621 -14.710 -5.396 -2.060 0.903 O18 XSO 29 XSO O24 O3 O 0 1 N N N 31.281 -7.679 -13.658 -8.149 3.860 -0.143 O24 XSO 30 XSO O25 O4 O 0 1 N N N 30.713 -9.502 -12.563 -6.955 4.506 1.600 O25 XSO 31 XSO O27 O5 O 0 1 N N N 26.835 -5.116 -16.134 -9.098 -1.138 -1.034 O27 XSO 32 XSO O28 O6 O 0 1 N N N 27.840 -6.620 -17.383 -7.129 -1.639 -1.903 O28 XSO 33 XSO S07 S1 S 0 1 Y N N 27.307 -11.781 -22.053 6.338 -0.948 1.292 S07 XSO 34 XSO H1 H1 H 0 1 N N N 23.674 -13.308 -16.623 -0.670 -3.131 0.675 H1 XSO 35 XSO H2 H2 H 0 1 N N N 27.198 -11.730 -18.465 -1.112 0.416 -1.664 H2 XSO 36 XSO H3 H3 H 0 1 N N N 25.613 -14.887 -22.230 5.300 1.970 -0.526 H3 XSO 37 XSO H4 H4 H 0 1 N N N 26.683 -6.862 -14.304 -7.255 -0.517 0.939 H4 XSO 38 XSO H5 H5 H 0 1 N N N 29.362 -7.819 -15.437 -7.244 1.668 -1.190 H5 XSO 39 XSO H6 H6 H 0 1 N N N 29.164 -6.303 -14.494 -8.618 1.311 -0.116 H6 XSO 40 XSO H7 H7 H 0 1 N N N 28.567 -7.500 -12.507 -7.189 1.759 1.860 H7 XSO 41 XSO H8 H8 H 0 1 N N N 28.327 -9.033 -13.412 -5.816 2.116 0.787 H8 XSO 42 XSO H9 H9 H 0 1 N N N 27.588 -15.135 -20.445 3.559 -0.185 1.974 H9 XSO 43 XSO H10 H10 H 0 1 N N N 29.006 -14.290 -21.152 3.365 1.285 0.989 H10 XSO 44 XSO H11 H11 H 0 1 N N N 29.164 -13.272 -19.103 3.162 -0.110 -1.051 H11 XSO 45 XSO H12 H12 H 0 1 N N N 27.778 -12.279 -19.668 3.357 -1.579 -0.066 H12 XSO 46 XSO H13 H13 H 0 1 N N N 27.401 -15.049 -18.478 1.319 -0.990 1.217 H13 XSO 47 XSO H14 H14 H 0 1 N N N 27.516 -13.588 -17.438 1.124 0.480 0.232 H14 XSO 48 XSO H15 H15 H 0 1 N N N 25.525 -13.383 -19.667 0.922 -0.914 -1.809 H15 XSO 49 XSO H16 H16 H 0 1 N N N 25.142 -14.598 -18.400 1.116 -2.384 -0.824 H16 XSO 50 XSO H17 H17 H 0 1 N N N 25.909 -9.709 -23.819 9.350 -1.288 0.902 H17 XSO 51 XSO H18 H18 H 0 1 N N N 23.017 -9.874 -25.932 11.523 -0.895 0.187 H18 XSO 52 XSO H19 H19 H 0 1 N N N 24.273 -8.826 -25.364 11.867 0.417 -0.804 H19 XSO 53 XSO H20 H20 H 0 1 N N N 27.538 -8.972 -16.244 -5.178 0.463 -0.865 H20 XSO 54 XSO H21 H21 H 0 1 N N N 31.659 -9.586 -12.553 -7.290 5.404 1.470 H21 XSO 55 XSO H22 H22 H 0 1 N N N 26.912 -4.630 -16.946 -9.511 -1.709 -1.695 H22 XSO 56 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal XSO N11 C02 SING N N 1 XSO N03 C02 DOUB N N 2 XSO N03 C04 SING N N 3 XSO C02 N01 SING N N 4 XSO O10 C04 DOUB N N 5 XSO C04 C08 SING N N 6 XSO N01 C09 SING N N 7 XSO C08 C09 DOUB Y N 8 XSO C08 C05 SING Y N 9 XSO C09 S07 SING Y N 10 XSO C05 C06 DOUB Y N 11 XSO S07 C06 SING Y N 12 XSO C06 C29 SING N N 13 XSO C29 C30 SING N N 14 XSO C30 C31 SING N N 15 XSO C32 C31 SING N N 16 XSO C32 C33 SING N N 17 XSO C15 C33 DOUB Y N 18 XSO C15 N13 SING Y N 19 XSO C33 C16 SING Y N 20 XSO O28 C26 DOUB N N 21 XSO N13 C12 DOUB Y N 22 XSO C16 C14 DOUB Y N 23 XSO C26 O27 SING N N 24 XSO C26 C20 SING N N 25 XSO C12 C14 SING Y N 26 XSO C12 C17 SING N N 27 XSO C14 F34 SING N N 28 XSO N19 C17 SING N N 29 XSO N19 C20 SING N N 30 XSO C17 O18 DOUB N N 31 XSO C20 C21 SING N N 32 XSO C21 C22 SING N N 33 XSO O24 C23 DOUB N N 34 XSO C22 C23 SING N N 35 XSO C23 O25 SING N N 36 XSO C16 H1 SING N N 37 XSO C15 H2 SING N N 38 XSO C05 H3 SING N N 39 XSO C20 H4 SING N N 40 XSO C21 H5 SING N N 41 XSO C21 H6 SING N N 42 XSO C22 H7 SING N N 43 XSO C22 H8 SING N N 44 XSO C29 H9 SING N N 45 XSO C29 H10 SING N N 46 XSO C30 H11 SING N N 47 XSO C30 H12 SING N N 48 XSO C31 H13 SING N N 49 XSO C31 H14 SING N N 50 XSO C32 H15 SING N N 51 XSO C32 H16 SING N N 52 XSO N01 H17 SING N N 53 XSO N11 H18 SING N N 54 XSO N11 H19 SING N N 55 XSO N19 H20 SING N N 56 XSO O25 H21 SING N N 57 XSO O27 H22 SING N N 58 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor XSO SMILES ACDLabs 12.01 "O=C(O)C(CCC(=O)O)NC(=O)c1ncc(cc1F)CCCCc1cc2C(=O)N=C(N)Nc2s1" XSO InChI InChI 1.06 "InChI=1S/C21H22FN5O6S/c22-13-7-10(9-24-16(13)18(31)25-14(20(32)33)5-6-15(28)29)3-1-2-4-11-8-12-17(30)26-21(23)27-19(12)34-11/h7-9,14H,1-6H2,(H,25,31)(H,28,29)(H,32,33)(H3,23,26,27,30)/t14-/m0/s1" XSO InChIKey InChI 1.06 USGRXMVHCFOWQP-AWEZNQCLSA-N XSO SMILES_CANONICAL CACTVS 3.385 "NC1=NC(=O)c2cc(CCCCc3cnc(C(=O)N[C@@H](CCC(O)=O)C(O)=O)c(F)c3)sc2N1" XSO SMILES CACTVS 3.385 "NC1=NC(=O)c2cc(CCCCc3cnc(C(=O)N[CH](CCC(O)=O)C(O)=O)c(F)c3)sc2N1" XSO SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1c(cnc(c1F)C(=O)N[C@@H](CCC(=O)O)C(=O)O)CCCCc2cc3c(s2)NC(=NC3=O)N" XSO SMILES "OpenEye OEToolkits" 2.0.7 "c1c(cnc(c1F)C(=O)NC(CCC(=O)O)C(=O)O)CCCCc2cc3c(s2)NC(=NC3=O)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier XSO "SYSTEMATIC NAME" ACDLabs 12.01 "N-{5-[4-(2-amino-4-oxo-1,4-dihydrothieno[2,3-d]pyrimidin-6-yl)butyl]-3-fluoropyridine-2-carbonyl}-L-glutamic acid" XSO "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{S})-2-[[5-[4-(2-azanyl-4-oxidanylidene-1~{H}-thieno[2,3-d]pyrimidin-6-yl)butyl]-3-fluoranyl-pyridin-2-yl]carbonylamino]pentanedioic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site XSO "Create component" 2022-12-06 RCSB XSO "Initial release" 2023-05-10 RCSB #