data_XT0 # _chem_comp.id XT0 _chem_comp.name "2-[4-[(4-cyclopentyl-1,2,3-triazol-1-yl)methyl]-2-oxidanyl-phenoxy]benzenecarbonitrile" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C21 H20 N4 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms PT512 _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2017-01-10 _chem_comp.pdbx_modified_date 2020-06-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 360.409 _chem_comp.one_letter_code ? _chem_comp.three_letter_code XT0 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5MTR _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal XT0 NAA N1 N 0 1 N N N 34.859 -12.037 10.870 7.176 0.736 0.632 NAA XT0 1 XT0 CAC C1 C 0 1 N N N 35.749 -11.475 11.395 6.350 0.006 0.356 CAC XT0 2 XT0 CAV C2 C 0 1 Y N N 36.786 -10.834 12.008 5.309 -0.914 0.009 CAV XT0 3 XT0 CAF C3 C 0 1 Y N N 36.695 -9.451 12.148 5.601 -2.267 -0.177 CAF XT0 4 XT0 CAD C4 C 0 1 Y N N 37.703 -8.718 12.781 4.594 -3.148 -0.511 CAD XT0 5 XT0 CAE C5 C 0 1 Y N N 38.800 -9.446 13.234 3.293 -2.697 -0.662 CAE XT0 6 XT0 CAG C6 C 0 1 Y N N 38.933 -10.814 13.057 2.991 -1.362 -0.480 CAG XT0 7 XT0 CAY C7 C 0 1 Y N N 37.915 -11.533 12.416 3.990 -0.463 -0.139 CAY XT0 8 XT0 OAS O1 O 0 1 N N N 37.878 -12.930 12.250 3.693 0.848 0.046 OAS XT0 9 XT0 CAX C8 C 0 1 Y N N 38.996 -13.550 12.725 2.386 1.220 -0.006 CAX XT0 10 XT0 CAT C9 C 0 1 Y N N 39.050 -13.857 14.106 1.592 1.141 1.134 CAT XT0 11 XT0 CAJ C10 C 0 1 Y N N 40.209 -14.447 14.656 0.261 1.522 1.076 CAJ XT0 12 XT0 OAB O2 O 0 1 N N N 37.964 -13.465 14.843 2.122 0.690 2.303 OAB XT0 13 XT0 CAI C11 C 0 1 Y N N 40.050 -13.883 11.929 1.843 1.685 -1.194 CAI XT0 14 XT0 CAH C12 C 0 1 Y N N 41.186 -14.542 12.458 0.514 2.063 -1.244 CAH XT0 15 XT0 CAU C13 C 0 1 Y N N 41.271 -14.772 13.838 -0.275 1.979 -0.113 CAU XT0 16 XT0 CAP C14 C 0 1 N N N 42.371 -15.419 14.334 -1.723 2.393 -0.174 CAP XT0 17 XT0 NBA N2 N 0 1 Y N N 43.575 -14.539 14.416 -2.547 1.237 -0.537 NBA XT0 18 XT0 CAK C15 C 0 1 Y N N 44.174 -13.953 15.435 -3.603 0.765 0.164 CAK XT0 19 XT0 NAR N3 N 0 1 Y N N 44.381 -14.286 13.304 -2.392 0.499 -1.580 NAR XT0 20 XT0 NAQ N4 N 0 1 Y N N 45.425 -13.480 13.664 -3.281 -0.431 -1.601 NAQ XT0 21 XT0 CAW C16 C 0 1 Y N N 45.194 -13.239 14.921 -4.065 -0.305 -0.525 CAW XT0 22 XT0 CAZ C17 C 0 1 N N N 46.252 -12.640 15.607 -5.233 -1.181 -0.152 CAZ XT0 23 XT0 CAN C18 C 0 1 N N N 46.212 -12.490 17.111 -6.554 -0.566 -0.659 CAN XT0 24 XT0 CAL C19 C 0 1 N N N 47.736 -12.830 17.333 -7.611 -0.840 0.426 CAL XT0 25 XT0 CAM C20 C 0 1 N N N 48.233 -11.949 16.047 -6.896 -1.613 1.553 CAM XT0 26 XT0 CAO C21 C 0 1 N N N 46.953 -11.553 15.144 -5.403 -1.232 1.387 CAO XT0 27 XT0 H1 H1 H 0 1 N N N 35.829 -8.935 11.760 6.614 -2.622 -0.061 H1 XT0 28 XT0 H2 H2 H 0 1 N N N 37.635 -7.648 12.911 4.821 -4.193 -0.656 H2 XT0 29 XT0 H3 H3 H 0 1 N N N 39.588 -8.917 13.750 2.511 -3.394 -0.923 H3 XT0 30 XT0 H4 H4 H 0 1 N N N 39.817 -11.324 13.411 1.974 -1.018 -0.600 H4 XT0 31 XT0 H5 H5 H 0 1 N N N 40.264 -14.644 15.717 -0.357 1.460 1.960 H5 XT0 32 XT0 H6 H6 H 0 1 N N N 38.091 -13.713 15.751 2.502 1.385 2.857 H6 XT0 33 XT0 H7 H7 H 0 1 N N N 40.019 -13.640 10.877 2.458 1.752 -2.079 H7 XT0 34 XT0 H8 H8 H 0 1 N N N 41.981 -14.865 11.803 0.092 2.426 -2.170 H8 XT0 35 XT0 H9 H9 H 0 1 N N N 42.136 -15.787 15.344 -2.035 2.770 0.800 H9 XT0 36 XT0 H10 H10 H 0 1 N N N 42.603 -16.271 13.678 -1.846 3.176 -0.922 H10 XT0 37 XT0 H11 H11 H 0 1 N N N 43.900 -14.031 16.477 -3.999 1.162 1.088 H11 XT0 38 XT0 H12 H12 H 0 1 N N N 47.017 -13.426 15.521 -5.100 -2.185 -0.557 H12 XT0 39 XT0 H13 H13 H 0 1 N N N 45.950 -11.471 17.432 -6.435 0.508 -0.801 H13 XT0 40 XT0 H14 H14 H 0 1 N N N 45.538 -13.212 17.595 -6.850 -1.036 -1.596 H14 XT0 41 XT0 H15 H15 H 0 1 N N N 47.960 -13.903 17.237 -8.005 0.101 0.809 H15 XT0 42 XT0 H16 H16 H 0 1 N N N 48.128 -12.458 18.291 -8.420 -1.443 0.014 H16 XT0 43 XT0 H17 H17 H 0 1 N N N 48.938 -12.542 15.446 -7.264 -1.293 2.528 H17 XT0 44 XT0 H18 H18 H 0 1 N N N 48.731 -11.034 16.399 -7.034 -2.686 1.427 H18 XT0 45 XT0 H19 H19 H 0 1 N N N 47.148 -11.578 14.062 -4.759 -1.997 1.821 H19 XT0 46 XT0 H20 H20 H 0 1 N N N 46.502 -10.586 15.413 -5.201 -0.257 1.830 H20 XT0 47 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal XT0 NAA CAC TRIP N N 1 XT0 CAC CAV SING N N 2 XT0 CAI CAH DOUB Y N 3 XT0 CAI CAX SING Y N 4 XT0 CAV CAF DOUB Y N 5 XT0 CAV CAY SING Y N 6 XT0 CAF CAD SING Y N 7 XT0 OAS CAY SING N N 8 XT0 OAS CAX SING N N 9 XT0 CAY CAG DOUB Y N 10 XT0 CAH CAU SING Y N 11 XT0 CAX CAT DOUB Y N 12 XT0 CAD CAE DOUB Y N 13 XT0 CAG CAE SING Y N 14 XT0 NAR NAQ DOUB Y N 15 XT0 NAR NBA SING Y N 16 XT0 NAQ CAW SING Y N 17 XT0 CAU CAP SING N N 18 XT0 CAU CAJ DOUB Y N 19 XT0 CAT CAJ SING Y N 20 XT0 CAT OAB SING N N 21 XT0 CAP NBA SING N N 22 XT0 NBA CAK SING Y N 23 XT0 CAW CAK DOUB Y N 24 XT0 CAW CAZ SING N N 25 XT0 CAO CAZ SING N N 26 XT0 CAO CAM SING N N 27 XT0 CAZ CAN SING N N 28 XT0 CAM CAL SING N N 29 XT0 CAN CAL SING N N 30 XT0 CAF H1 SING N N 31 XT0 CAD H2 SING N N 32 XT0 CAE H3 SING N N 33 XT0 CAG H4 SING N N 34 XT0 CAJ H5 SING N N 35 XT0 OAB H6 SING N N 36 XT0 CAI H7 SING N N 37 XT0 CAH H8 SING N N 38 XT0 CAP H9 SING N N 39 XT0 CAP H10 SING N N 40 XT0 CAK H11 SING N N 41 XT0 CAZ H12 SING N N 42 XT0 CAN H13 SING N N 43 XT0 CAN H14 SING N N 44 XT0 CAL H15 SING N N 45 XT0 CAL H16 SING N N 46 XT0 CAM H17 SING N N 47 XT0 CAM H18 SING N N 48 XT0 CAO H19 SING N N 49 XT0 CAO H20 SING N N 50 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor XT0 InChI InChI 1.03 "InChI=1S/C21H20N4O2/c22-12-17-7-3-4-8-20(17)27-21-10-9-15(11-19(21)26)13-25-14-18(23-24-25)16-5-1-2-6-16/h3-4,7-11,14,16,26H,1-2,5-6,13H2" XT0 InChIKey InChI 1.03 JZCMMIRMZDKLJY-UHFFFAOYSA-N XT0 SMILES_CANONICAL CACTVS 3.385 "Oc1cc(Cn2cc(nn2)C3CCCC3)ccc1Oc4ccccc4C#N" XT0 SMILES CACTVS 3.385 "Oc1cc(Cn2cc(nn2)C3CCCC3)ccc1Oc4ccccc4C#N" XT0 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "c1ccc(c(c1)C#N)Oc2ccc(cc2O)Cn3cc(nn3)C4CCCC4" XT0 SMILES "OpenEye OEToolkits" 2.0.6 "c1ccc(c(c1)C#N)Oc2ccc(cc2O)Cn3cc(nn3)C4CCCC4" # _pdbx_chem_comp_identifier.comp_id XT0 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.6 _pdbx_chem_comp_identifier.identifier "2-[4-[(4-cyclopentyl-1,2,3-triazol-1-yl)methyl]-2-oxidanyl-phenoxy]benzenecarbonitrile" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site XT0 "Create component" 2017-01-10 EBI XT0 "Initial release" 2017-02-15 RCSB XT0 "Modify synonyms" 2020-06-05 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id XT0 _pdbx_chem_comp_synonyms.name PT512 _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##