data_XTA # _chem_comp.id XTA _chem_comp.name "(1-{[2-(3,5-dichlorophenyl)-6-{[2-(4-methylpiperazin-1-yl)pyrimidin-5-yl]oxy}pyridin-4-yl]methyl}piperidin-4-yl)acetic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C28 H32 Cl2 N6 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-01-12 _chem_comp.pdbx_modified_date 2022-01-07 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 571.498 _chem_comp.one_letter_code ? _chem_comp.three_letter_code XTA _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7LCU _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal XTA C10 C1 C 0 1 Y N N -67.369 -34.890 98.762 -2.398 -2.300 2.309 C10 XTA 1 XTA C11 C2 C 0 1 Y N N -67.229 -36.258 98.648 -1.328 -2.211 1.425 C11 XTA 2 XTA C13 C3 C 0 1 Y N N -65.000 -36.427 97.716 0.556 -0.866 1.681 C13 XTA 3 XTA C14 C4 C 0 1 Y N N -63.732 -36.857 98.066 1.893 -0.713 2.025 C14 XTA 4 XTA C15 C5 C 0 1 Y N N -62.675 -36.468 97.257 2.513 0.508 1.814 C15 XTA 5 XTA C16 C6 C 0 1 N N N -61.264 -36.893 97.581 3.962 0.709 2.176 C16 XTA 6 XTA C18 C7 C 0 1 N N N -59.322 -38.169 96.942 6.199 0.770 1.253 C18 XTA 7 XTA C19 C8 C 0 1 N N N -58.756 -39.252 96.035 7.017 0.530 -0.018 C19 XTA 8 XTA C20 C9 C 0 1 N N N -59.468 -40.578 96.223 6.951 -0.954 -0.389 C20 XTA 9 XTA C21 C10 C 0 1 N N N -58.936 -41.630 95.242 7.717 -1.189 -1.692 C21 XTA 10 XTA C22 C11 C 0 1 N N N -59.391 -43.031 95.484 7.757 -2.665 -1.992 C22 XTA 11 XTA C25 C12 C 0 1 N N N -60.963 -40.358 96.061 5.486 -1.361 -0.575 C25 XTA 12 XTA C26 C13 C 0 1 N N N -61.483 -39.230 96.952 4.713 -1.067 0.712 C26 XTA 13 XTA C27 C14 C 0 1 Y N N -62.939 -35.679 96.155 1.771 1.541 1.263 C27 XTA 14 XTA C28 C15 C 0 1 Y N N -64.245 -35.291 95.886 0.435 1.321 0.941 C28 XTA 15 XTA C30 C16 C 0 1 Y N N -64.587 -34.481 94.694 -0.369 2.419 0.350 C30 XTA 16 XTA C31 C17 C 0 1 Y N N -65.719 -33.667 94.678 -1.735 2.248 0.137 C31 XTA 17 XTA C32 C18 C 0 1 Y N N -66.020 -32.946 93.540 -2.479 3.273 -0.414 C32 XTA 18 XTA C34 C19 C 0 1 Y N N -65.238 -33.005 92.408 -1.870 4.469 -0.753 C34 XTA 19 XTA C01 C20 C 0 1 N N N -74.389 -32.973 100.815 -8.839 -2.050 -1.873 C01 XTA 20 XTA C03 C21 C 0 1 N N N -73.119 -34.839 100.003 -6.591 -2.950 -1.889 C03 XTA 21 XTA C04 C22 C 0 1 N N N -72.101 -35.297 98.980 -5.157 -2.699 -1.416 C04 XTA 22 XTA C06 C23 C 0 1 N N N -71.018 -33.098 99.201 -6.004 -1.594 0.564 C06 XTA 23 XTA C07 C24 C 0 1 N N N -72.079 -32.734 100.216 -7.438 -1.845 0.091 C07 XTA 24 XTA C08 C25 C 0 1 Y N N -69.622 -35.127 98.957 -3.833 -2.503 0.521 C08 XTA 25 XTA C35 C26 C 0 1 Y N N -64.129 -33.820 92.441 -0.513 4.644 -0.543 C35 XTA 26 XTA C37 C27 C 0 1 Y N N -63.799 -34.560 93.550 0.239 3.626 0.012 C37 XTA 27 XTA C38 C28 C 0 1 Y N N -68.382 -37.014 98.729 -1.589 -2.280 0.061 C38 XTA 28 XTA N02 N1 N 0 1 N N N -73.326 -33.407 99.908 -7.466 -1.886 -1.378 N02 XTA 29 XTA N05 N2 N 0 1 N N N -70.841 -34.551 99.127 -5.129 -2.658 0.053 N05 XTA 30 XTA N09 N3 N 0 1 Y N N -68.562 -34.302 98.924 -3.621 -2.446 1.827 N09 XTA 31 XTA N17 N4 N 0 1 N N N -60.756 -37.968 96.716 4.806 0.365 1.024 N17 XTA 32 XTA N29 N5 N 0 1 Y N N -65.277 -35.676 96.658 -0.125 0.136 1.152 N29 XTA 33 XTA N39 N6 N 0 1 Y N N -69.594 -36.465 98.866 -2.838 -2.428 -0.350 N39 XTA 34 XTA O12 O1 O 0 1 N N N -65.980 -36.873 98.553 -0.057 -2.059 1.884 O12 XTA 35 XTA O23 O2 O 0 1 N N N -59.250 -43.600 96.547 8.381 -3.110 -3.094 O23 XTA 36 XTA O24 O3 O 0 1 N N N -59.946 -43.575 94.432 7.226 -3.449 -1.241 O24 XTA 37 XTA CL3 CL1 CL 0 0 N N N -67.434 -31.930 93.527 -4.182 3.062 -0.680 CL3 XTA 38 XTA CL6 CL2 CL 0 0 N N N -63.129 -33.937 91.026 0.244 6.146 -0.971 CL6 XTA 39 XTA H51 H1 H 0 1 N N N -66.485 -34.271 98.719 -2.232 -2.254 3.375 H51 XTA 40 XTA H52 H2 H 0 1 N N N -63.571 -37.474 98.938 2.444 -1.537 2.454 H52 XTA 41 XTA H53 H3 H 0 1 N N N -61.238 -37.244 98.623 4.127 1.751 2.450 H53 XTA 42 XTA H54 H4 H 0 1 N N N -60.605 -36.019 97.472 4.218 0.067 3.019 H54 XTA 43 XTA H55 H5 H 0 1 N N N -59.164 -38.463 97.990 6.618 0.183 2.071 H55 XTA 44 XTA H56 H6 H 0 1 N N N -58.794 -37.225 96.743 6.232 1.828 1.513 H56 XTA 45 XTA H57 H7 H 0 1 N N N -57.689 -39.386 96.265 6.607 1.128 -0.832 H57 XTA 46 XTA H58 H8 H 0 1 N N N -58.869 -38.933 94.988 8.054 0.816 0.157 H58 XTA 47 XTA H59 H9 H 0 1 N N N -59.278 -40.934 97.246 7.396 -1.549 0.408 H59 XTA 48 XTA H60 H10 H 0 1 N N N -57.837 -41.618 95.296 7.218 -0.666 -2.507 H60 XTA 49 XTA H61 H11 H 0 1 N N N -59.256 -41.341 94.230 8.735 -0.812 -1.588 H61 XTA 50 XTA H64 H12 H 0 1 N N N -61.172 -40.104 95.011 5.052 -0.793 -1.398 H64 XTA 51 XTA H63 H13 H 0 1 N N N -61.488 -41.288 96.325 5.430 -2.426 -0.798 H63 XTA 52 XTA H66 H14 H 0 1 N N N -62.551 -39.071 96.739 3.667 -1.342 0.579 H66 XTA 53 XTA H65 H15 H 0 1 N N N -61.358 -39.522 98.005 5.139 -1.645 1.532 H65 XTA 54 XTA H67 H16 H 0 1 N N N -62.135 -35.365 95.506 2.224 2.505 1.087 H67 XTA 55 XTA H68 H17 H 0 1 N N N -66.355 -33.601 95.549 -2.211 1.315 0.401 H68 XTA 56 XTA H69 H18 H 0 1 N N N -65.486 -32.433 91.526 -2.454 5.267 -1.187 H69 XTA 57 XTA H42 H19 H 0 1 N N N -74.527 -31.885 100.725 -9.231 -3.013 -1.546 H42 XTA 58 XTA H40 H20 H 0 1 N N N -75.327 -33.485 100.552 -9.466 -1.250 -1.480 H40 XTA 59 XTA H41 H21 H 0 1 N N N -74.113 -33.223 101.850 -8.840 -2.010 -2.963 H41 XTA 60 XTA H43 H22 H 0 1 N N N -74.073 -35.355 99.821 -6.619 -2.951 -2.979 H43 XTA 61 XTA H44 H23 H 0 1 N N N -72.755 -35.086 101.011 -6.934 -3.914 -1.515 H44 XTA 62 XTA H45 H24 H 0 1 N N N -72.504 -35.129 97.970 -4.511 -3.502 -1.770 H45 XTA 63 XTA H46 H25 H 0 1 N N N -71.904 -36.370 99.123 -4.804 -1.747 -1.813 H46 XTA 64 XTA H48 H26 H 0 1 N N N -70.065 -32.634 99.494 -5.661 -0.629 0.190 H48 XTA 65 XTA H47 H27 H 0 1 N N N -71.321 -32.721 98.213 -5.976 -1.592 1.654 H47 XTA 66 XTA H50 H28 H 0 1 N N N -71.741 -33.038 101.218 -7.791 -2.797 0.488 H50 XTA 67 XTA H49 H29 H 0 1 N N N -72.240 -31.646 100.197 -8.084 -1.042 0.445 H49 XTA 68 XTA H70 H30 H 0 1 N N N -62.930 -35.201 93.534 1.298 3.764 0.176 H70 XTA 69 XTA H71 H31 H 0 1 N N N -68.302 -38.090 98.680 -0.782 -2.214 -0.654 H71 XTA 70 XTA H3 H34 H 0 1 N N N -59.601 -44.480 96.484 8.380 -4.065 -3.244 H3 XTA 71 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal XTA CL6 C35 SING N N 1 XTA C34 C35 DOUB Y N 2 XTA C34 C32 SING Y N 3 XTA C35 C37 SING Y N 4 XTA CL3 C32 SING N N 5 XTA C32 C31 DOUB Y N 6 XTA C37 C30 DOUB Y N 7 XTA O24 C22 DOUB N N 8 XTA C31 C30 SING Y N 9 XTA C30 C28 SING N N 10 XTA C21 C22 SING N N 11 XTA C21 C20 SING N N 12 XTA C22 O23 SING N N 13 XTA C28 C27 DOUB Y N 14 XTA C28 N29 SING Y N 15 XTA C19 C20 SING N N 16 XTA C19 C18 SING N N 17 XTA C25 C20 SING N N 18 XTA C25 C26 SING N N 19 XTA C27 C15 SING Y N 20 XTA N29 C13 DOUB Y N 21 XTA N17 C18 SING N N 22 XTA N17 C26 SING N N 23 XTA N17 C16 SING N N 24 XTA C15 C16 SING N N 25 XTA C15 C14 DOUB Y N 26 XTA C13 C14 SING Y N 27 XTA C13 O12 SING N N 28 XTA O12 C11 SING N N 29 XTA C11 C38 DOUB Y N 30 XTA C11 C10 SING Y N 31 XTA C38 N39 SING Y N 32 XTA C10 N09 DOUB Y N 33 XTA N39 C08 DOUB Y N 34 XTA N09 C08 SING Y N 35 XTA C08 N05 SING N N 36 XTA C04 N05 SING N N 37 XTA C04 C03 SING N N 38 XTA N05 C06 SING N N 39 XTA C06 C07 SING N N 40 XTA N02 C03 SING N N 41 XTA N02 C07 SING N N 42 XTA N02 C01 SING N N 43 XTA C10 H51 SING N N 44 XTA C14 H52 SING N N 45 XTA C16 H53 SING N N 46 XTA C16 H54 SING N N 47 XTA C18 H55 SING N N 48 XTA C18 H56 SING N N 49 XTA C19 H57 SING N N 50 XTA C19 H58 SING N N 51 XTA C20 H59 SING N N 52 XTA C21 H60 SING N N 53 XTA C21 H61 SING N N 54 XTA C25 H64 SING N N 55 XTA C25 H63 SING N N 56 XTA C26 H66 SING N N 57 XTA C26 H65 SING N N 58 XTA C27 H67 SING N N 59 XTA C31 H68 SING N N 60 XTA C34 H69 SING N N 61 XTA C01 H42 SING N N 62 XTA C01 H40 SING N N 63 XTA C01 H41 SING N N 64 XTA C03 H43 SING N N 65 XTA C03 H44 SING N N 66 XTA C04 H45 SING N N 67 XTA C04 H46 SING N N 68 XTA C06 H48 SING N N 69 XTA C06 H47 SING N N 70 XTA C07 H50 SING N N 71 XTA C07 H49 SING N N 72 XTA C37 H70 SING N N 73 XTA C38 H71 SING N N 74 XTA O23 H3 SING N N 75 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor XTA SMILES ACDLabs 12.01 "c2nc(N1CCN(C)CC1)ncc2Oc4cc(CN3CCC(CC(O)=O)CC3)cc(n4)c5cc(cc(c5)Cl)Cl" XTA InChI InChI 1.03 "InChI=1S/C28H32Cl2N6O3/c1-34-6-8-36(9-7-34)28-31-16-24(17-32-28)39-26-11-20(18-35-4-2-19(3-5-35)12-27(37)38)10-25(33-26)21-13-22(29)15-23(30)14-21/h10-11,13-17,19H,2-9,12,18H2,1H3,(H,37,38)" XTA InChIKey InChI 1.03 AZEJIKZNBHEXCM-UHFFFAOYSA-N XTA SMILES_CANONICAL CACTVS 3.385 "CN1CCN(CC1)c2ncc(Oc3cc(CN4CCC(CC4)CC(O)=O)cc(n3)c5cc(Cl)cc(Cl)c5)cn2" XTA SMILES CACTVS 3.385 "CN1CCN(CC1)c2ncc(Oc3cc(CN4CCC(CC4)CC(O)=O)cc(n3)c5cc(Cl)cc(Cl)c5)cn2" XTA SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CN1CCN(CC1)c2ncc(cn2)Oc3cc(cc(n3)c4cc(cc(c4)Cl)Cl)CN5CCC(CC5)CC(=O)O" XTA SMILES "OpenEye OEToolkits" 2.0.7 "CN1CCN(CC1)c2ncc(cn2)Oc3cc(cc(n3)c4cc(cc(c4)Cl)Cl)CN5CCC(CC5)CC(=O)O" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier XTA "SYSTEMATIC NAME" ACDLabs 12.01 "(1-{[2-(3,5-dichlorophenyl)-6-{[2-(4-methylpiperazin-1-yl)pyrimidin-5-yl]oxy}pyridin-4-yl]methyl}piperidin-4-yl)acetic acid" XTA "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "2-[1-[[2-[3,5-bis(chloranyl)phenyl]-6-[2-(4-methylpiperazin-1-yl)pyrimidin-5-yl]oxy-pyridin-4-yl]methyl]piperidin-4-yl]ethanoic acid" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site XTA "Create component" 2021-01-12 RCSB XTA "Initial release" 2022-01-12 RCSB ##