data_XTJ # _chem_comp.id XTJ _chem_comp.name "(3-fluorophenyl)methyl [(2S)-3-cyclopropyl-1-oxo-1-({(2S)-1-oxo-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}amino)propan-2-yl]carbamate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C21 H28 F N3 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-01-12 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 421.463 _chem_comp.one_letter_code ? _chem_comp.three_letter_code XTJ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7LCO _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal XTJ C10 C1 C 0 1 N N N N N N -11.548 15.306 4.303 5.862 -1.530 -1.194 C10 XTJ 1 XTJ C15 C2 C 0 1 N N N N N N -16.321 12.748 -0.753 0.862 2.902 0.198 C15 XTJ 2 XTJ C17 C3 C 0 1 N N N N N N -18.695 13.315 0.122 0.364 5.352 -0.573 C17 XTJ 3 XTJ C20 C4 C 0 1 N N N N N N -14.940 16.165 0.065 -1.667 0.308 -0.445 C20 XTJ 4 XTJ C22 C5 C 0 1 N N N N N N -14.455 18.522 -0.070 -3.679 -0.870 -0.956 C22 XTJ 5 XTJ C24 C6 C 0 1 Y N N N N N -14.979 20.946 -0.194 -6.007 -0.084 -1.428 C24 XTJ 6 XTJ C26 C7 C 0 1 Y N N N N N -16.465 22.052 -1.826 -7.852 -0.732 -0.046 C26 XTJ 7 XTJ C02 C8 C 0 1 N N N N N N -14.275 13.195 0.588 1.251 0.518 0.756 C02 XTJ 8 XTJ C04 C9 C 0 1 N N S N N N -12.688 12.136 2.243 3.371 -0.416 1.511 C04 XTJ 9 XTJ C05 C10 C 0 1 N N N N N N -12.205 12.886 3.509 4.734 -0.670 0.865 C05 XTJ 10 XTJ C06 C11 C 0 1 N N S N N N -11.948 14.387 3.177 4.538 -1.378 -0.477 C06 XTJ 11 XTJ C07 C12 C 0 1 N N N N N N -10.785 14.464 2.201 4.056 -2.830 -0.258 C07 XTJ 12 XTJ C08 C13 C 0 1 N N N N N N -10.132 15.854 2.446 4.788 -3.580 -1.393 C08 XTJ 13 XTJ C12 C14 C 0 1 N N N N N N -12.713 10.617 2.473 3.571 0.206 2.895 C12 XTJ 14 XTJ C14 C15 C 0 1 N N S N N N -15.650 13.750 0.149 0.453 1.460 -0.108 C14 XTJ 15 XTJ C16 C16 C 0 1 N N N N N N -17.580 12.277 0.010 0.156 3.850 -0.774 C16 XTJ 16 XTJ C18 C17 C 0 1 N N N N N N -18.834 12.138 -0.864 1.031 4.639 -1.751 C18 XTJ 17 XTJ C23 C18 C 0 1 Y N N N N N -15.189 19.729 -0.702 -5.150 -0.824 -0.635 C23 XTJ 18 XTJ C25 C19 C 0 1 Y N N N N N -15.656 22.192 -0.791 -7.357 -0.036 -1.132 C25 XTJ 19 XTJ C27 C20 C 0 1 Y N N N N N -16.724 20.663 -2.421 -6.995 -1.479 0.746 C27 XTJ 20 XTJ C29 C21 C 0 1 Y N N N N N -16.138 19.576 -1.915 -5.643 -1.521 0.451 C29 XTJ 21 XTJ F28 F1 F 0 1 N N N N N N -17.573 20.587 -3.507 -7.477 -2.160 1.808 F28 XTJ 22 XTJ N03 N1 N 0 1 N N N N N N -14.038 12.625 1.905 2.596 0.500 0.671 N03 XTJ 23 XTJ N09 N2 N 0 1 N N N N N N -10.470 16.196 3.864 5.975 -2.772 -1.696 N09 XTJ 24 XTJ N19 N3 N 0 1 N N N N N N -15.423 14.969 -0.602 -0.975 1.288 0.170 N19 XTJ 25 XTJ O01 O1 O 0 1 N N N N N N -13.359 13.231 -0.150 0.682 -0.225 1.528 O01 XTJ 26 XTJ O11 O2 O 0 1 N N N N N N -12.018 15.365 5.374 6.697 -0.657 -1.304 O11 XTJ 27 XTJ O13 O3 O 0 1 N N N N N N -11.693 10.091 2.889 4.374 1.383 2.777 O13 XTJ 28 XTJ O21 O4 O 0 1 N N N N N N -14.821 17.320 -0.731 -2.998 0.209 -0.263 O21 XTJ 29 XTJ O30 O5 O 0 1 N N N N N N -14.654 16.148 1.239 -1.091 -0.485 -1.163 O30 XTJ 30 XTJ H151 H1 H 0 0 N N N N N N -15.650 11.898 -0.948 0.576 3.152 1.220 H151 XTJ 31 XTJ H152 H2 H 0 0 N N N N N N -16.604 13.219 -1.706 1.941 3.006 0.088 H152 XTJ 32 XTJ H171 H3 H 0 0 N N N N N N -18.537 14.335 -0.258 -0.476 6.011 -0.793 H171 XTJ 33 XTJ H172 H4 H 0 0 N N N N N N -19.322 13.353 1.025 1.003 5.666 0.252 H172 XTJ 34 XTJ H222 H5 H 0 0 N N N N N N -14.727 18.448 0.993 -3.267 -1.827 -0.634 H222 XTJ 35 XTJ H221 H6 H 0 0 N N N N N N -13.369 18.670 -0.161 -3.537 -0.758 -2.031 H221 XTJ 36 XTJ H241 H7 H 0 0 N N N N N N -14.320 21.058 0.654 -5.621 0.461 -2.277 H241 XTJ 37 XTJ H261 H8 H 0 0 N N N N N N -16.946 22.919 -2.254 -8.906 -0.694 0.186 H261 XTJ 38 XTJ H041 H9 H 0 0 N N N N N N -11.997 12.358 1.417 2.834 -1.359 1.611 H041 XTJ 39 XTJ H052 H10 H 0 0 N N N N N N -12.975 12.813 4.291 5.243 0.280 0.704 H052 XTJ 40 XTJ H051 H11 H 0 0 N N N N N N -11.272 12.428 3.869 5.336 -1.298 1.522 H051 XTJ 41 XTJ H061 H12 H 0 0 N N N N N N -12.847 14.791 2.689 3.830 -0.828 -1.097 H061 XTJ 42 XTJ H072 H13 H 0 0 N N N N N N -11.146 14.386 1.165 4.370 -3.199 0.718 H072 XTJ 43 XTJ H071 H14 H 0 0 N N N N N N -10.062 13.659 2.399 2.975 -2.908 -0.374 H071 XTJ 44 XTJ H082 H15 H 0 0 N N N N N N -9.042 15.798 2.311 5.082 -4.575 -1.060 H082 XTJ 45 XTJ H081 H16 H 0 0 N N N N N N -10.549 16.604 1.757 4.149 -3.649 -2.273 H081 XTJ 46 XTJ H121 H17 H 0 0 N N N N N N -13.511 10.407 3.200 2.601 0.470 3.318 H121 XTJ 47 XTJ H141 H18 H 0 0 N N N N N N -16.273 13.942 1.035 0.648 1.243 -1.158 H141 XTJ 48 XTJ H161 H19 H 0 0 N N N N N N -17.444 11.567 0.839 -0.821 3.520 -1.127 H161 XTJ 49 XTJ H181 H20 H 0 0 N N N N N N -18.773 12.317 -1.948 0.629 4.828 -2.747 H181 XTJ 50 XTJ H182 H21 H 0 0 N N N N N N -19.559 11.335 -0.665 2.109 4.484 -1.701 H182 XTJ 51 XTJ H251 H22 H 0 0 N N N N N N -15.472 23.169 -0.369 -8.025 0.547 -1.749 H251 XTJ 52 XTJ H291 H23 H 0 0 N N N N N N -16.323 18.603 -2.346 -4.974 -2.103 1.068 H291 XTJ 53 XTJ H031 H24 H 0 0 N N N N N N -14.780 12.565 2.572 3.050 1.094 0.054 H031 XTJ 54 XTJ H091 H25 H 0 0 N N N N N N -10.036 16.908 4.416 6.745 -3.094 -2.191 H091 XTJ 55 XTJ H191 H26 H 0 0 N N N N N N -15.600 14.986 -1.586 -1.422 1.878 0.796 H191 XTJ 56 XTJ H1 H27 H 0 1 N Y N N N N -12.959 10.143 1.512 4.070 -0.510 3.547 H1 XTJ 57 XTJ H2 H28 H 0 1 N N N N N N -11.836 9.157 2.989 4.542 1.830 3.617 H2 XTJ 58 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal XTJ F28 C27 SING N N 1 XTJ C27 C29 DOUB Y N 2 XTJ C27 C26 SING Y N 3 XTJ C29 C23 SING Y N 4 XTJ C26 C25 DOUB Y N 5 XTJ C18 C16 SING N N 6 XTJ C18 C17 SING N N 7 XTJ C25 C24 SING Y N 8 XTJ C15 C16 SING N N 9 XTJ C15 C14 SING N N 10 XTJ O21 C22 SING N N 11 XTJ O21 C20 SING N N 12 XTJ C23 C24 DOUB Y N 13 XTJ C23 C22 SING N N 14 XTJ N19 C20 SING N N 15 XTJ N19 C14 SING N N 16 XTJ O01 C02 DOUB N N 17 XTJ C16 C17 SING N N 18 XTJ C20 O30 DOUB N N 19 XTJ C14 C02 SING N N 20 XTJ C02 N03 SING N N 21 XTJ N03 C04 SING N N 22 XTJ C07 C08 SING N N 23 XTJ C07 C06 SING N N 24 XTJ C04 C12 SING N N 25 XTJ C04 C05 SING N N 26 XTJ C08 N09 SING N N 27 XTJ C12 O13 SING N N 28 XTJ C06 C05 SING N N 29 XTJ C06 C10 SING N N 30 XTJ N09 C10 SING N N 31 XTJ C10 O11 DOUB N N 32 XTJ C15 H151 SING N N 33 XTJ C15 H152 SING N N 34 XTJ C17 H171 SING N N 35 XTJ C17 H172 SING N N 36 XTJ C22 H222 SING N N 37 XTJ C22 H221 SING N N 38 XTJ C24 H241 SING N N 39 XTJ C26 H261 SING N N 40 XTJ C04 H041 SING N N 41 XTJ C05 H052 SING N N 42 XTJ C05 H051 SING N N 43 XTJ C06 H061 SING N N 44 XTJ C07 H072 SING N N 45 XTJ C07 H071 SING N N 46 XTJ C08 H082 SING N N 47 XTJ C08 H081 SING N N 48 XTJ C12 H121 SING N N 49 XTJ C14 H141 SING N N 50 XTJ C16 H161 SING N N 51 XTJ C18 H181 SING N N 52 XTJ C18 H182 SING N N 53 XTJ C25 H251 SING N N 54 XTJ C29 H291 SING N N 55 XTJ N03 H031 SING N N 56 XTJ N09 H091 SING N N 57 XTJ N19 H191 SING N N 58 XTJ C12 H1 SING N N 59 XTJ O13 H2 SING N N 60 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor XTJ SMILES ACDLabs 12.01 "C3(=O)C(CC(CO)NC(C(CC1CC1)NC(=O)OCc2cccc(c2)F)=O)CCN3" XTJ InChI InChI 1.03 "InChI=1S/C21H28FN3O5/c22-16-3-1-2-14(8-16)12-30-21(29)25-18(9-13-4-5-13)20(28)24-17(11-26)10-15-6-7-23-19(15)27/h1-3,8,13,15,17-18,26H,4-7,9-12H2,(H,23,27)(H,24,28)(H,25,29)/t15-,17-,18-/m0/s1" XTJ InChIKey InChI 1.03 ZGWMPLGBRIXUDR-SZMVWBNQSA-N XTJ SMILES_CANONICAL CACTVS 3.385 "OC[C@H](C[C@@H]1CCNC1=O)NC(=O)[C@H](CC2CC2)NC(=O)OCc3cccc(F)c3" XTJ SMILES CACTVS 3.385 "OC[CH](C[CH]1CCNC1=O)NC(=O)[CH](CC2CC2)NC(=O)OCc3cccc(F)c3" XTJ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(cc(c1)F)COC(=O)N[C@@H](CC2CC2)C(=O)N[C@@H](C[C@@H]3CCNC3=O)CO" XTJ SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(cc(c1)F)COC(=O)NC(CC2CC2)C(=O)NC(CC3CCNC3=O)CO" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier XTJ "SYSTEMATIC NAME" ACDLabs 12.01 "(3-fluorophenyl)methyl [(2S)-3-cyclopropyl-1-({(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}amino)-1-oxopropan-2-yl]carbamate" XTJ "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(3-fluorophenyl)methyl ~{N}-[(2~{S})-3-cyclopropyl-1-oxidanylidene-1-[[(2~{S})-1-oxidanyl-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]amino]propan-2-yl]carbamate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site XTJ "Create component" 2021-01-12 RCSB XTJ "Initial release" 2021-07-07 RCSB XTJ "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id XTJ _pdbx_chem_comp_pcm.modified_residue_id CYS _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C12 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom SG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #