data_XTT # _chem_comp.id XTT _chem_comp.name "6-[(6P)-6-(1-methyl-1H-imidazol-5-yl)-2,3-dihydro-4H-1,4-thiazin-4-yl]-7,9-dihydro-8H-purin-8-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C13 H13 N7 O S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "Aplithianine B" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-12-07 _chem_comp.pdbx_modified_date 2023-10-13 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 315.354 _chem_comp.one_letter_code ? _chem_comp.three_letter_code XTT _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8FE5 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal XTT C10 C1 C 0 1 Y N N 8.914 18.340 -2.414 4.764 1.943 0.619 C10 XTT 1 XTT C13 C2 C 0 1 N N N -0.764 21.462 0.425 -3.812 1.547 -1.149 C13 XTT 2 XTT C01 C3 C 0 1 N N N 2.428 18.254 -0.426 -0.173 -2.016 -1.114 C01 XTT 3 XTT C02 C4 C 0 1 N N N 3.185 16.832 -0.398 1.082 -2.807 -0.715 C02 XTT 4 XTT C03 C5 C 0 1 Y N N 3.656 23.008 0.000 -3.073 -1.364 2.142 C03 XTT 5 XTT C04 C6 C 0 1 Y N N 1.311 22.581 0.253 -3.790 0.180 0.596 C04 XTT 6 XTT C05 C7 C 0 1 Y N N 1.576 21.211 0.139 -2.561 0.078 -0.057 C05 XTT 7 XTT C06 C8 C 0 1 Y N N 2.956 20.781 -0.050 -1.602 -0.793 0.460 C06 XTT 8 XTT C07 C9 C 0 1 N N N 5.292 18.327 -1.497 1.934 -0.229 -0.075 C07 XTT 9 XTT C08 C10 C 0 1 N N N 4.684 19.255 -0.573 0.639 -0.034 0.168 C08 XTT 10 XTT C09 C11 C 0 1 Y N N 6.740 18.021 -1.919 2.906 0.802 0.329 C09 XTT 11 XTT C11 C12 C 0 1 Y N N 7.307 16.793 -2.216 2.646 1.930 1.049 C11 XTT 12 XTT C12 C13 C 0 1 N N N 7.548 20.420 -1.805 5.006 -0.205 -0.682 C12 XTT 13 XTT N01 N1 N 0 1 N N N 3.357 19.386 -0.186 -0.366 -0.930 -0.153 N01 XTT 14 XTT N02 N2 N 0 1 Y N N 3.944 21.657 -0.101 -1.899 -1.491 1.556 N02 XTT 15 XTT N03 N3 N 0 1 Y N N 2.393 23.540 0.186 -4.007 -0.557 1.681 N03 XTT 16 XTT N04 N4 N 0 1 N N N -0.168 22.649 0.428 -4.545 1.098 -0.112 N04 XTT 17 XTT N05 N5 N 0 1 N N N 0.235 20.588 0.257 -2.605 0.948 -1.142 N05 XTT 18 XTT N06 N6 N 0 1 Y N N 7.722 18.988 -2.028 4.258 0.811 0.062 N06 XTT 19 XTT N07 N7 N 0 1 Y N N 8.653 17.005 -2.527 3.796 2.597 1.201 N07 XTT 20 XTT O01 O1 O 0 1 N N N -2.126 21.189 0.574 -4.185 2.365 -1.969 O01 XTT 21 XTT S01 S1 S 0 1 N N N 4.506 16.732 -1.717 2.512 -1.694 -0.868 S01 XTT 22 XTT H1 H1 H 0 1 N N N 9.867 18.817 -2.590 5.799 2.248 0.588 H1 XTT 23 XTT H2 H2 H 0 1 N N N 1.956 18.385 -1.411 -0.042 -1.601 -2.113 H2 XTT 24 XTT H3 H3 H 0 1 N N N 1.654 18.259 0.355 -1.041 -2.675 -1.100 H3 XTT 25 XTT H4 H4 H 0 1 N N N 2.449 16.032 -0.568 0.991 -3.150 0.316 H4 XTT 26 XTT H5 H5 H 0 1 N N N 3.653 16.696 0.588 1.207 -3.662 -1.379 H5 XTT 27 XTT H6 H6 H 0 1 N N N 4.482 23.700 -0.072 -3.281 -1.950 3.026 H6 XTT 28 XTT H8 H8 H 0 1 N N N 5.366 19.954 -0.112 0.353 0.889 0.650 H8 XTT 29 XTT H10 H10 H 0 1 N N N 6.799 15.840 -2.209 1.682 2.233 1.429 H10 XTT 30 XTT H11 H11 H 0 1 N N N 6.507 20.622 -1.513 5.273 -1.022 -0.013 H11 XTT 31 XTT H12 H12 H 0 1 N N N 8.224 20.751 -1.003 4.389 -0.588 -1.495 H12 XTT 32 XTT H13 H13 H 0 1 N N N 7.782 20.966 -2.731 5.913 0.240 -1.092 H13 XTT 33 XTT H14 H14 H 0 1 N N N -0.666 23.509 0.538 -5.451 1.371 0.102 H14 XTT 34 XTT H15 H15 H 0 1 N N N 0.090 19.599 0.215 -1.893 1.094 -1.784 H15 XTT 35 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal XTT N07 C10 DOUB Y N 1 XTT N07 C11 SING Y N 2 XTT C10 N06 SING Y N 3 XTT C11 C09 DOUB Y N 4 XTT N06 C09 SING Y N 5 XTT N06 C12 SING N N 6 XTT C09 C07 SING N N 7 XTT S01 C07 SING N N 8 XTT S01 C02 SING N N 9 XTT C07 C08 DOUB N N 10 XTT C08 N01 SING N N 11 XTT C01 C02 SING N N 12 XTT C01 N01 SING N N 13 XTT N01 C06 SING N N 14 XTT N02 C06 DOUB Y N 15 XTT N02 C03 SING Y N 16 XTT C06 C05 SING Y N 17 XTT C03 N03 DOUB Y N 18 XTT C05 C04 DOUB Y N 19 XTT C05 N05 SING N N 20 XTT N03 C04 SING Y N 21 XTT C04 N04 SING N N 22 XTT N05 C13 SING N N 23 XTT C13 N04 SING N N 24 XTT C13 O01 DOUB N N 25 XTT C10 H1 SING N N 26 XTT C01 H2 SING N N 27 XTT C01 H3 SING N N 28 XTT C02 H4 SING N N 29 XTT C02 H5 SING N N 30 XTT C03 H6 SING N N 31 XTT C08 H8 SING N N 32 XTT C11 H10 SING N N 33 XTT C12 H11 SING N N 34 XTT C12 H12 SING N N 35 XTT C12 H13 SING N N 36 XTT N04 H14 SING N N 37 XTT N05 H15 SING N N 38 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor XTT SMILES ACDLabs 12.01 "Cn1cncc1C1=CN(CCS1)c1ncnc2NC(=O)Nc12" XTT InChI InChI 1.06 "InChI=1S/C13H13N7OS/c1-19-7-14-4-8(19)9-5-20(2-3-22-9)12-10-11(15-6-16-12)18-13(21)17-10/h4-7H,2-3H2,1H3,(H2,15,16,17,18,21)" XTT InChIKey InChI 1.06 SKLGDFMOCQVDTN-UHFFFAOYSA-N XTT SMILES_CANONICAL CACTVS 3.385 "Cn1cncc1C2=CN(CCS2)c3ncnc4NC(=O)Nc34" XTT SMILES CACTVS 3.385 "Cn1cncc1C2=CN(CCS2)c3ncnc4NC(=O)Nc34" XTT SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cn1cncc1C2=CN(CCS2)c3c4c(ncn3)NC(=O)N4" XTT SMILES "OpenEye OEToolkits" 2.0.7 "Cn1cncc1C2=CN(CCS2)c3c4c(ncn3)NC(=O)N4" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier XTT "SYSTEMATIC NAME" ACDLabs 12.01 "6-[(6P)-6-(1-methyl-1H-imidazol-5-yl)-2,3-dihydro-4H-1,4-thiazin-4-yl]-7,9-dihydro-8H-purin-8-one" XTT "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "6-[6-(3-methylimidazol-4-yl)-2,3-dihydro-1,4-thiazin-4-yl]-7,9-dihydropurin-8-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site XTT "Create component" 2022-12-07 RCSB XTT "Initial release" 2023-10-18 RCSB # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id XTT _pdbx_chem_comp_synonyms.name "Aplithianine B" _pdbx_chem_comp_synonyms.provenance AUTHOR _pdbx_chem_comp_synonyms.type ? #