data_XUC # _chem_comp.id XUC _chem_comp.name "2-[4-[(2~{R})-2-[(4-chlorophenyl)methyl]pyrrolidin-1-yl]piperidin-1-yl]pyridine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C21 H26 Cl N3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-11-13 _chem_comp.pdbx_modified_date 2024-03-08 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 355.904 _chem_comp.one_letter_code ? _chem_comp.three_letter_code XUC _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8R42 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag XUC C18 C1 C 0 1 N N N -27.792 -23.076 37.935 1.994 -0.044 1.281 C18 XUC 1 N N N XUC C16 C2 C 0 1 N N N -28.194 -23.832 35.619 1.607 0.784 -0.964 C16 XUC 2 N N N XUC C15 C3 C 0 1 N N N -29.378 -24.722 36.001 0.100 0.866 -0.713 C15 XUC 3 N N N XUC C14 C4 C 0 1 N N N -30.229 -24.002 37.096 -0.301 -0.201 0.310 C14 XUC 4 N N N XUC C12 C5 C 0 1 N N N -31.648 -24.264 38.794 1.229 -2.094 0.366 C12 XUC 5 N N N XUC C11 C6 C 0 1 N N N -33.019 -24.978 38.812 1.114 -3.618 0.147 C11 XUC 6 N N N XUC C10 C7 C 0 1 N N N -33.110 -25.525 37.492 -0.398 -3.889 0.003 C10 XUC 7 N N N XUC C02 C8 C 0 1 Y N N -33.259 -30.388 35.272 -4.354 1.253 -0.024 C02 XUC 8 N N N XUC C03 C9 C 0 1 Y N N -33.105 -30.471 36.774 -3.459 1.179 -1.077 C03 XUC 9 N N N XUC C04 C10 C 0 1 Y N N -32.480 -29.467 37.445 -2.783 0.000 -1.327 C04 XUC 10 N N N XUC C05 C11 C 0 1 Y N N -31.937 -28.268 36.698 -3.001 -1.105 -0.527 C05 XUC 11 N N N XUC C06 C12 C 0 1 Y N N -32.066 -28.190 35.350 -3.895 -1.033 0.525 C06 XUC 12 N N N XUC C07 C13 C 0 1 Y N N -32.775 -29.319 34.599 -4.572 0.146 0.776 C07 XUC 13 N N N XUC C08 C14 C 0 1 N N N -31.223 -27.161 37.502 -2.264 -2.391 -0.801 C08 XUC 14 N N N XUC C09 C15 C 0 1 N N R -31.688 -25.705 37.103 -1.069 -2.506 0.148 C09 XUC 15 N N N XUC C19 C16 C 0 1 N N N -29.325 -23.133 38.032 0.498 0.014 1.598 C19 XUC 16 N N N XUC C20 C17 C 0 1 Y N N -26.022 -22.850 36.250 3.699 1.059 0.085 C20 XUC 17 N N N XUC C21 C18 C 0 1 Y N N -25.569 -22.544 34.904 4.556 1.261 1.162 C21 XUC 18 N N N XUC C22 C19 C 0 1 Y N N -24.327 -22.263 34.621 5.919 1.322 0.936 C22 XUC 19 N N N XUC C23 C20 C 0 1 Y N N -23.444 -22.237 35.464 6.381 1.177 -0.366 C23 XUC 20 N N N XUC C24 C21 C 0 1 Y N N -23.638 -22.476 36.730 5.474 0.978 -1.388 C24 XUC 21 N N N XUC N13 N1 N 0 1 N N N -30.921 -24.858 37.825 -0.011 -1.535 -0.232 N13 XUC 22 N N N XUC N17 N2 N 0 1 N N N -27.378 -23.155 36.577 2.327 0.996 0.298 N17 XUC 23 N N N XUC N25 N3 N 0 1 Y N N -24.899 -22.799 37.265 4.179 0.930 -1.142 N25 XUC 24 N N N XUC CL01 CL1 CL 0 0 N N N -34.075 -31.683 34.433 -5.198 2.736 0.295 CL01 XUC 25 N N N XUC H1 H1 H 0 1 N N N -27.362 -23.920 38.495 2.566 0.123 2.193 H1 XUC 26 N N N XUC H2 H2 H 0 1 N N N -27.436 -22.129 38.368 2.241 -1.023 0.871 H2 XUC 27 N N N XUC H3 H3 H 0 1 N N N -27.511 -24.471 35.040 1.856 -0.199 -1.363 H3 XUC 28 N N N XUC H4 H4 H 0 1 N N N -28.605 -23.048 34.966 1.898 1.551 -1.681 H4 XUC 29 N N N XUC H5 H5 H 0 1 N N N -30.001 -24.907 35.113 -0.152 1.853 -0.327 H5 XUC 30 N N N XUC H6 H6 H 0 1 N N N -29.007 -25.680 36.394 -0.435 0.693 -1.647 H6 XUC 31 N N N XUC H7 H7 H 0 1 N N N -30.907 -23.312 36.574 -1.367 -0.119 0.523 H7 XUC 32 N N N XUC H8 H8 H 0 1 N N N -31.148 -24.376 39.767 1.274 -1.865 1.431 H8 XUC 33 N N N XUC H9 H9 H 0 1 N N N -31.779 -23.195 38.570 2.109 -1.702 -0.144 H9 XUC 34 N N N XUC H10 H10 H 0 1 N N N -33.835 -24.265 39.002 1.639 -3.910 -0.762 H10 XUC 35 N N N XUC H11 H11 H 0 1 N N N -33.042 -25.773 39.572 1.517 -4.155 1.005 H11 XUC 36 N N N XUC H12 H12 H 0 1 N N N -33.621 -24.829 36.810 -0.615 -4.314 -0.976 H12 XUC 37 N N N XUC H13 H13 H 0 1 N N N -33.642 -26.488 37.499 -0.738 -4.561 0.791 H13 XUC 38 N N N XUC H14 H14 H 0 1 N N N -33.490 -31.325 37.312 -3.289 2.043 -1.702 H14 XUC 39 N N N XUC H15 H15 H 0 1 N N N -32.370 -29.526 38.518 -2.084 -0.057 -2.149 H15 XUC 40 N N N XUC H16 H16 H 0 1 N N N -31.672 -27.340 34.812 -4.065 -1.897 1.150 H16 XUC 41 N N N XUC H17 H17 H 0 1 N N N -32.890 -29.262 33.527 -5.270 0.203 1.598 H17 XUC 42 N N N XUC H18 H18 H 0 1 N N N -31.433 -27.315 38.571 -2.935 -3.235 -0.644 H18 XUC 43 N N N XUC H19 H19 H 0 1 N N N -30.140 -27.243 37.325 -1.911 -2.395 -1.832 H19 XUC 44 N N N XUC H20 H20 H 0 1 N N N -31.564 -25.569 36.018 -1.385 -2.342 1.178 H20 XUC 45 N N N XUC H21 H21 H 0 1 N N N -29.671 -22.097 37.902 0.248 -0.768 2.316 H21 XUC 46 N N N XUC H22 H22 H 0 1 N N N -29.547 -23.468 39.056 0.252 0.988 2.021 H22 XUC 47 N N N XUC H23 H23 H 0 1 N N N -26.293 -22.549 34.102 4.162 1.370 2.162 H23 XUC 48 N N N XUC H24 H24 H 0 1 N N N -24.068 -22.044 33.596 6.608 1.479 1.752 H24 XUC 49 N N N XUC H25 H25 H 0 1 N N N -22.441 -22.001 35.140 7.439 1.220 -0.577 H25 XUC 50 N N N XUC H26 H26 H 0 1 N N N -22.792 -22.424 37.400 5.830 0.866 -2.401 H26 XUC 51 N N N # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal XUC CL01 C02 SING N N 1 XUC C07 C02 DOUB Y N 2 XUC C07 C06 SING Y N 3 XUC C22 C21 DOUB Y N 4 XUC C22 C23 SING Y N 5 XUC C21 C20 SING Y N 6 XUC C02 C03 SING Y N 7 XUC C06 C05 DOUB Y N 8 XUC C23 C24 DOUB Y N 9 XUC C16 C15 SING N N 10 XUC C16 N17 SING N N 11 XUC C15 C14 SING N N 12 XUC C20 N17 SING N N 13 XUC C20 N25 DOUB Y N 14 XUC N17 C18 SING N N 15 XUC C05 C04 SING Y N 16 XUC C05 C08 SING N N 17 XUC C24 N25 SING Y N 18 XUC C03 C04 DOUB Y N 19 XUC C14 N13 SING N N 20 XUC C14 C19 SING N N 21 XUC C09 C10 SING N N 22 XUC C09 C08 SING N N 23 XUC C09 N13 SING N N 24 XUC C10 C11 SING N N 25 XUC N13 C12 SING N N 26 XUC C18 C19 SING N N 27 XUC C12 C11 SING N N 28 XUC C18 H1 SING N N 29 XUC C18 H2 SING N N 30 XUC C16 H3 SING N N 31 XUC C16 H4 SING N N 32 XUC C15 H5 SING N N 33 XUC C15 H6 SING N N 34 XUC C14 H7 SING N N 35 XUC C12 H8 SING N N 36 XUC C12 H9 SING N N 37 XUC C11 H10 SING N N 38 XUC C11 H11 SING N N 39 XUC C10 H12 SING N N 40 XUC C10 H13 SING N N 41 XUC C03 H14 SING N N 42 XUC C04 H15 SING N N 43 XUC C06 H16 SING N N 44 XUC C07 H17 SING N N 45 XUC C08 H18 SING N N 46 XUC C08 H19 SING N N 47 XUC C09 H20 SING N N 48 XUC C19 H21 SING N N 49 XUC C19 H22 SING N N 50 XUC C21 H23 SING N N 51 XUC C22 H24 SING N N 52 XUC C23 H25 SING N N 53 XUC C24 H26 SING N N 54 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor XUC InChI InChI 1.06 "InChI=1S/C21H26ClN3/c22-18-8-6-17(7-9-18)16-20-4-3-13-25(20)19-10-14-24(15-11-19)21-5-1-2-12-23-21/h1-2,5-9,12,19-20H,3-4,10-11,13-16H2/t20-/m1/s1" XUC InChIKey InChI 1.06 XCVVDQHGTQAUAD-HXUWFJFHSA-N XUC SMILES_CANONICAL CACTVS 3.385 "Clc1ccc(C[C@H]2CCCN2C3CCN(CC3)c4ccccn4)cc1" XUC SMILES CACTVS 3.385 "Clc1ccc(C[CH]2CCCN2C3CCN(CC3)c4ccccn4)cc1" XUC SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccnc(c1)N2CCC(CC2)N3CCC[C@@H]3Cc4ccc(cc4)Cl" XUC SMILES "OpenEye OEToolkits" 2.0.7 "c1ccnc(c1)N2CCC(CC2)N3CCCC3Cc4ccc(cc4)Cl" # _pdbx_chem_comp_identifier.comp_id XUC _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "2-[4-[(2~{R})-2-[(4-chlorophenyl)methyl]pyrrolidin-1-yl]piperidin-1-yl]pyridine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site XUC "Create component" 2023-11-13 PDBE XUC "Initial release" 2024-03-13 RCSB #