data_XVD # _chem_comp.id XVD _chem_comp.name "6-[2-chloro-6-(trifluoromethoxy)phenyl]-1H-benzimidazol-2-ol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C14 H8 Cl F3 N2 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-01-15 _chem_comp.pdbx_modified_date 2021-05-07 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 328.674 _chem_comp.one_letter_code ? _chem_comp.three_letter_code XVD _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7LEP _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal XVD N1 N1 N 0 1 Y N N 245.797 239.183 142.581 4.246 1.297 -0.709 N1 XVD 1 XVD C4 C1 C 0 1 Y N N 239.310 241.191 146.416 -3.200 -0.763 0.266 C4 XVD 2 XVD C5 C2 C 0 1 Y N N 240.435 240.633 145.845 -1.967 -0.169 0.054 C5 XVD 3 XVD C6 C3 C 0 1 Y N N 241.036 241.249 144.771 -0.827 -0.967 -0.093 C6 XVD 4 XVD C7 C4 C 0 1 Y N N 242.274 240.630 144.146 0.497 -0.340 -0.321 C7 XVD 5 XVD C8 C5 C 0 1 Y N N 243.520 241.188 144.371 1.499 -0.469 0.636 C8 XVD 6 XVD C10 C6 C 0 1 Y N N 244.547 239.495 142.997 2.968 0.840 -0.767 C10 XVD 7 XVD C13 C7 C 0 1 Y N N 246.643 240.055 143.092 4.801 0.910 0.411 C13 XVD 8 XVD C1 C8 C 0 1 Y N N 240.510 242.415 144.253 -0.943 -2.355 -0.025 C1 XVD 9 XVD C11 C9 C 0 1 Y N N 243.276 238.920 142.766 1.950 0.960 -1.718 C11 XVD 10 XVD C12 C10 C 0 1 Y N N 242.152 239.495 143.344 0.735 0.379 -1.496 C12 XVD 11 XVD C14 C11 C 0 1 N N N 240.152 238.347 146.308 -3.070 1.934 0.146 C14 XVD 12 XVD C2 C12 C 0 1 Y N N 239.385 242.973 144.818 -2.179 -2.933 0.188 C2 XVD 13 XVD C3 C13 C 0 1 Y N N 238.787 242.359 145.899 -3.303 -2.140 0.338 C3 XVD 14 XVD C9 C14 C 0 1 Y N N 244.666 240.601 143.788 2.734 0.119 0.417 C9 XVD 15 XVD F1 F1 F 0 1 N N N 239.312 238.358 147.380 -2.785 3.301 0.052 F1 XVD 16 XVD F2 F2 F 0 1 N N N 240.904 237.211 146.325 -3.628 1.660 1.400 F2 XVD 17 XVD F3 F3 F 0 1 N N N 239.435 238.396 145.157 -3.977 1.577 -0.857 F3 XVD 18 XVD N2 N2 N 0 1 Y N N 245.981 240.921 143.826 3.911 0.180 1.143 N2 XVD 19 XVD O1 O1 O 0 1 N N N 248.024 240.053 142.900 6.069 1.192 0.787 O1 XVD 20 XVD O2 O2 O 0 1 N N N 240.987 239.458 146.358 -1.864 1.184 -0.012 O2 XVD 21 XVD CL1 CL1 CL 0 0 N N N 241.277 243.215 142.858 0.465 -3.354 -0.206 CL1 XVD 22 XVD H2 H2 H 0 1 N N N 238.840 240.716 147.264 -4.081 -0.150 0.381 H2 XVD 23 XVD H3 H3 H 0 1 N N N 243.616 242.068 144.989 1.316 -1.024 1.544 H3 XVD 24 XVD H4 H4 H 0 1 N N N 243.180 238.041 142.145 2.124 1.514 -2.628 H4 XVD 25 XVD H5 H5 H 0 1 N N N 241.178 239.061 143.172 -0.047 0.474 -2.234 H5 XVD 26 XVD H6 H6 H 0 1 N N N 238.973 243.887 144.417 -2.269 -4.008 0.241 H6 XVD 27 XVD H7 H7 H 0 1 N N N 237.904 242.795 146.343 -4.266 -2.599 0.504 H7 XVD 28 XVD H8 H8 H 0 1 N N N 246.381 241.688 144.328 4.073 -0.222 2.011 H8 XVD 29 XVD H1 H1 H 0 1 N N N 248.265 239.323 142.341 6.156 2.013 1.292 H1 XVD 30 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal XVD N1 C10 SING Y N 1 XVD N1 C13 DOUB Y N 2 XVD C11 C10 DOUB Y N 3 XVD C11 C12 SING Y N 4 XVD CL1 C1 SING N N 5 XVD O1 C13 SING N N 6 XVD C10 C9 SING Y N 7 XVD C13 N2 SING Y N 8 XVD C12 C7 DOUB Y N 9 XVD C9 N2 SING Y N 10 XVD C9 C8 DOUB Y N 11 XVD C7 C8 SING Y N 12 XVD C7 C6 SING N N 13 XVD C1 C6 DOUB Y N 14 XVD C1 C2 SING Y N 15 XVD C6 C5 SING Y N 16 XVD C2 C3 DOUB Y N 17 XVD F3 C14 SING N N 18 XVD C5 O2 SING N N 19 XVD C5 C4 DOUB Y N 20 XVD C3 C4 SING Y N 21 XVD C14 F2 SING N N 22 XVD C14 O2 SING N N 23 XVD C14 F1 SING N N 24 XVD C4 H2 SING N N 25 XVD C8 H3 SING N N 26 XVD C11 H4 SING N N 27 XVD C12 H5 SING N N 28 XVD C2 H6 SING N N 29 XVD C3 H7 SING N N 30 XVD N2 H8 SING N N 31 XVD O1 H1 SING N N 32 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor XVD SMILES ACDLabs 12.01 "n3c2c(cc(c1c(cccc1Cl)OC(F)(F)F)cc2)nc3O" XVD InChI InChI 1.03 "InChI=1S/C14H8ClF3N2O2/c15-8-2-1-3-11(22-14(16,17)18)12(8)7-4-5-9-10(6-7)20-13(21)19-9/h1-6H,(H2,19,20,21)" XVD InChIKey InChI 1.03 COBXSLRIXGQVGS-UHFFFAOYSA-N XVD SMILES_CANONICAL CACTVS 3.385 "Oc1[nH]c2cc(ccc2n1)c3c(Cl)cccc3OC(F)(F)F" XVD SMILES CACTVS 3.385 "Oc1[nH]c2cc(ccc2n1)c3c(Cl)cccc3OC(F)(F)F" XVD SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(c(c(c1)Cl)c2ccc3c(c2)[nH]c(n3)O)OC(F)(F)F" XVD SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(c(c(c1)Cl)c2ccc3c(c2)[nH]c(n3)O)OC(F)(F)F" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier XVD "SYSTEMATIC NAME" ACDLabs 12.01 "6-[2-chloro-6-(trifluoromethoxy)phenyl]-1H-benzimidazol-2-ol" XVD "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "6-[2-chloranyl-6-(trifluoromethyloxy)phenyl]-1~{H}-benzimidazol-2-ol" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site XVD "Create component" 2021-01-15 RCSB XVD "Initial release" 2021-05-12 RCSB ##