data_XVJ # _chem_comp.id XVJ _chem_comp.name "diethyl [(4-{(2S,3R)-4-{[(1,3-benzothiazol-6-yl)sulfonyl][(2S)-2-methylbutyl]amino}-2-[({[(3R,3aS,6aR)-hexahydrofuro[2,3-b]furan-3-yl]oxy}carbonyl)amino]-3-hydroxybutyl}phenoxy)methyl]phosphonate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C34 H48 N3 O11 P S2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-01-15 _chem_comp.pdbx_modified_date 2022-01-21 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 769.862 _chem_comp.one_letter_code ? _chem_comp.three_letter_code XVJ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7LEE _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal XVJ C10 C1 C 0 1 N N S 5.648 0.434 -14.415 -0.356 0.303 -1.390 C10 XVJ 1 XVJ C13 C2 C 0 1 N N N 0.598 -1.343 -11.940 -1.093 5.630 -0.198 C13 XVJ 2 XVJ C15 C3 C 0 1 N N R 1.576 -3.133 -10.744 0.195 7.045 1.164 C15 XVJ 3 XVJ C17 C4 C 0 1 N N N 3.838 -3.377 -11.234 -0.341 6.536 3.397 C17 XVJ 4 XVJ C20 C5 C 0 1 Y N N 7.099 -2.219 -12.362 -3.317 1.743 -1.322 C20 XVJ 5 XVJ C21 C6 C 0 1 Y N N 7.251 -2.621 -10.909 -4.605 1.672 -0.827 C21 XVJ 6 XVJ C22 C7 C 0 1 Y N N 7.487 -1.565 -9.869 -5.327 0.494 -0.942 C22 XVJ 7 XVJ C24 C8 C 0 1 Y N N 7.389 0.338 -11.733 -3.471 -0.532 -2.059 C24 XVJ 8 XVJ C26 C9 C 0 1 N N S 3.622 3.973 -16.544 4.418 1.590 0.070 C26 XVJ 9 XVJ C28 C10 C 0 1 N N N 2.939 4.411 -15.266 5.357 0.562 0.705 C28 XVJ 10 XVJ C01 C11 C 0 1 Y N N 9.809 6.101 -17.837 5.939 -3.730 1.449 C01 XVJ 11 XVJ C02 C12 C 0 1 Y N N 8.704 6.784 -17.164 4.589 -3.891 1.114 C02 XVJ 12 XVJ C03 C13 C 0 1 Y N N 7.846 6.050 -16.223 4.042 -3.184 0.046 C03 XVJ 13 XVJ C04 C14 C 0 1 Y N N 8.149 4.607 -15.940 4.830 -2.322 -0.685 C04 XVJ 14 XVJ C05 C15 C 0 1 Y N N 9.287 3.877 -16.558 6.168 -2.158 -0.358 C05 XVJ 15 XVJ C06 C16 C 0 1 Y N N 10.155 4.630 -17.516 6.720 -2.841 0.683 C06 XVJ 16 XVJ C07 C17 C 0 1 N N N 5.143 4.190 -16.581 4.137 1.196 -1.382 C07 XVJ 17 XVJ C08 C18 C 0 1 N N N 6.206 1.814 -16.514 2.047 -0.155 -0.885 C08 XVJ 18 XVJ C09 C19 C 0 1 N N R 5.263 0.728 -15.869 1.057 0.264 -1.974 C09 XVJ 19 XVJ C11 C20 C 0 1 N N N 3.582 -0.022 -12.886 -0.109 2.564 -0.515 C11 XVJ 20 XVJ C12 C21 C 0 1 N N R 1.731 -0.854 -11.538 0.176 4.829 0.180 C12 XVJ 21 XVJ C14 C22 C 0 1 N N S 2.218 -1.756 -10.396 0.658 5.589 1.441 C14 XVJ 22 XVJ C16 C23 C 0 1 N N N 3.545 -2.016 -10.368 -0.227 5.185 2.648 C16 XVJ 23 XVJ C18 C24 C 0 1 N N N 6.959 -0.365 -14.270 -1.346 0.722 -2.478 C18 XVJ 24 XVJ C19 C25 C 0 1 Y N N 7.163 -0.715 -12.759 -2.751 0.642 -1.938 C19 XVJ 25 XVJ C23 C26 C 0 1 Y N N 7.563 -0.065 -10.258 -4.755 -0.611 -1.556 C23 XVJ 26 XVJ C25 C27 C 0 1 N N N 3.087 6.381 -17.378 5.244 3.419 1.558 C25 XVJ 27 XVJ C27 C28 C 0 1 N N N 3.072 4.818 -17.750 5.076 2.971 0.105 C27 XVJ 28 XVJ C29 C29 C 0 1 N N N 6.877 -1.068 -7.698 -7.279 -0.824 -0.610 C29 XVJ 29 XVJ C30 C30 C 0 1 N N N 7.296 0.142 -4.093 -7.176 -4.553 1.275 C30 XVJ 30 XVJ C31 C31 C 0 1 N N N 8.738 -3.546 -6.319 -4.220 -3.056 1.159 C31 XVJ 31 XVJ C32 C32 C 0 1 N N N 6.782 1.528 -3.751 -8.064 -5.717 0.832 C32 XVJ 32 XVJ C33 C33 C 0 1 N N N 10.042 -4.113 -5.685 -2.786 -3.045 0.625 C33 XVJ 33 XVJ C34 C34 C 0 1 Y N N 9.768 8.439 -18.619 5.382 -5.222 3.037 C34 XVJ 34 XVJ N35 N1 N 0 1 N N N 5.824 3.075 -15.829 3.413 -0.077 -1.410 N35 XVJ 35 XVJ N36 N2 N 0 1 N N N 4.576 -0.437 -13.883 -0.404 1.268 -0.289 N36 XVJ 36 XVJ N37 N3 N 0 1 Y N N 10.483 7.206 -18.750 6.285 -4.487 2.507 N37 XVJ 37 XVJ O38 O1 O 0 1 N N N 8.054 2.540 -14.165 5.233 -0.970 -2.817 O38 XVJ 38 XVJ O39 O2 O 0 1 N N N 6.258 4.713 -13.815 3.093 -2.237 -2.560 O39 XVJ 39 XVJ O40 O3 O 0 1 N N N 5.396 -0.440 -16.568 1.104 -0.677 -3.048 O40 XVJ 40 XVJ O41 O4 O 0 1 N N N 3.477 1.059 -12.357 0.196 2.931 -1.632 O41 XVJ 41 XVJ O42 O5 O 0 1 N N N 2.731 -1.122 -12.607 -0.153 3.451 0.497 O42 XVJ 42 XVJ O43 O6 O 0 1 N N N 0.793 -2.943 -11.771 -0.776 6.996 0.113 O43 XVJ 43 XVJ O44 O7 O 0 1 N N N 2.758 -4.141 -11.128 -0.429 7.527 2.361 O44 XVJ 44 XVJ O45 O8 O 0 1 N N N 7.624 -1.944 -8.516 -6.594 0.421 -0.455 O45 XVJ 45 XVJ O46 O9 O 0 1 N N N 6.321 -0.524 -4.920 -7.391 -3.434 0.413 O46 XVJ 46 XVJ O47 O10 O 0 1 N N N 8.277 -2.440 -5.578 -5.047 -2.247 0.321 O47 XVJ 47 XVJ O48 O11 O 0 1 N N N 5.781 -2.855 -5.926 -6.823 -1.524 1.962 O48 XVJ 48 XVJ P49 P1 P 0 1 N N N 6.783 -1.790 -5.947 -6.620 -2.031 0.587 P49 XVJ 49 XVJ S50 S1 S 0 1 N N N 7.080 3.702 -14.775 4.137 -1.428 -2.036 S50 XVJ 50 XVJ S51 S2 S 0 1 Y N N 8.589 8.256 -17.586 3.885 -5.050 2.236 S51 XVJ 51 XVJ H101 H1 H 0 0 N N N 5.713 1.371 -13.843 -0.623 -0.686 -1.018 H101 XVJ 52 XVJ H131 H2 H 0 0 N N N 0.407 -1.079 -12.991 -1.306 5.523 -1.262 H131 XVJ 53 XVJ H132 H3 H 0 0 N N N -0.231 -0.980 -11.314 -1.944 5.294 0.395 H132 XVJ 54 XVJ H151 H4 H 0 0 N N N 1.049 -3.523 -9.861 1.043 7.674 0.891 H151 XVJ 55 XVJ H171 H5 H 0 0 N N N 4.715 -3.903 -10.828 -1.247 6.542 4.003 H171 XVJ 56 XVJ H172 H6 H 0 0 N N N 4.019 -3.123 -12.289 0.534 6.719 4.022 H172 XVJ 57 XVJ H201 H7 H 0 0 N N N 6.947 -2.973 -13.120 -2.754 2.660 -1.233 H201 XVJ 58 XVJ H211 H8 H 0 0 N N N 7.190 -3.661 -10.624 -5.048 2.533 -0.349 H211 XVJ 59 XVJ H241 H9 H 0 0 N N N 7.431 1.378 -12.021 -3.025 -1.391 -2.537 H241 XVJ 60 XVJ H261 H10 H 0 0 N N N 3.405 2.911 -16.730 3.482 1.620 0.627 H261 XVJ 61 XVJ H283 H11 H 0 0 N N N 3.324 3.819 -14.422 5.647 0.900 1.700 H283 XVJ 62 XVJ H281 H12 H 0 0 N N N 3.142 5.477 -15.089 4.846 -0.398 0.781 H281 XVJ 63 XVJ H282 H13 H 0 0 N N N 1.854 4.255 -15.358 6.247 0.451 0.085 H282 XVJ 64 XVJ H031 H14 H 0 0 N N N 7.012 6.540 -15.743 3.000 -3.311 -0.210 H031 XVJ 65 XVJ H051 H15 H 0 0 N N N 9.480 2.841 -16.324 6.779 -1.481 -0.936 H051 XVJ 66 XVJ H061 H16 H 0 0 N N N 11.009 4.154 -17.975 7.764 -2.701 0.924 H061 XVJ 67 XVJ H071 H17 H 0 0 N N N 5.488 4.193 -17.625 3.533 1.968 -1.857 H071 XVJ 68 XVJ H072 H18 H 0 0 N N N 5.388 5.154 -16.111 5.080 1.090 -1.919 H072 XVJ 69 XVJ H081 H19 H 0 0 N N N 7.263 1.573 -16.329 1.949 0.511 -0.028 H081 XVJ 70 XVJ H082 H20 H 0 0 N N N 6.032 1.889 -17.597 1.835 -1.179 -0.575 H082 XVJ 71 XVJ H091 H21 H 0 0 N N N 4.228 1.101 -15.899 1.324 1.253 -2.346 H091 XVJ 72 XVJ H121 H22 H 0 0 N N N 1.715 0.204 -11.238 0.921 4.878 -0.614 H121 XVJ 73 XVJ H141 H23 H 0 0 N N N 1.829 -1.394 -9.433 1.730 5.490 1.616 H141 XVJ 74 XVJ H162 H24 H 0 0 N N N 3.871 -2.163 -9.328 0.267 4.435 3.264 H162 XVJ 75 XVJ H161 H25 H 0 0 N N N 4.096 -1.172 -10.809 -1.206 4.837 2.317 H161 XVJ 76 XVJ H182 H26 H 0 0 N N N 6.896 -1.291 -14.860 -1.134 1.746 -2.788 H182 XVJ 77 XVJ H181 H27 H 0 0 N N N 7.804 0.241 -14.628 -1.248 0.056 -3.335 H181 XVJ 78 XVJ H231 H28 H 0 0 N N N 7.736 0.687 -9.503 -5.317 -1.528 -1.651 H231 XVJ 79 XVJ H253 H29 H 0 0 N N N 2.701 6.964 -18.227 5.872 2.704 2.089 H253 XVJ 80 XVJ H252 H30 H 0 0 N N N 2.453 6.554 -16.496 5.713 4.403 1.583 H252 XVJ 81 XVJ H251 H31 H 0 0 N N N 4.118 6.695 -17.156 4.267 3.470 2.038 H251 XVJ 82 XVJ H271 H32 H 0 0 N N N 2.041 4.506 -17.973 6.054 2.920 -0.375 H271 XVJ 83 XVJ H272 H33 H 0 0 N N N 3.705 4.648 -18.633 4.448 3.686 -0.426 H272 XVJ 84 XVJ H292 H34 H 0 0 N N N 7.368 -0.084 -7.666 -8.344 -0.678 -0.430 H292 XVJ 85 XVJ H291 H35 H 0 0 N N N 5.862 -0.957 -8.107 -7.129 -1.197 -1.623 H291 XVJ 86 XVJ H302 H36 H 0 0 N N N 7.451 -0.433 -3.168 -7.425 -4.275 2.299 H302 XVJ 87 XVJ H301 H37 H 0 0 N N N 8.248 0.225 -4.638 -6.129 -4.854 1.225 H301 XVJ 88 XVJ H311 H38 H 0 0 N N N 8.944 -3.230 -7.352 -4.597 -4.079 1.165 H311 XVJ 89 XVJ H312 H39 H 0 0 N N N 7.965 -4.329 -6.322 -4.232 -2.659 2.174 H312 XVJ 90 XVJ H322 H40 H 0 0 N N N 7.518 2.047 -3.119 -9.110 -5.416 0.882 H322 XVJ 91 XVJ H321 H41 H 0 0 N N N 6.626 2.100 -4.678 -7.814 -5.995 -0.192 H321 XVJ 92 XVJ H323 H42 H 0 0 N N N 5.829 1.442 -3.208 -7.899 -6.570 1.490 H323 XVJ 93 XVJ H333 H43 H 0 0 N N N 10.391 -4.975 -6.272 -2.774 -3.443 -0.390 H333 XVJ 94 XVJ H332 H44 H 0 0 N N N 10.818 -3.333 -5.683 -2.408 -2.023 0.619 H332 XVJ 95 XVJ H331 H45 H 0 0 N N N 9.839 -4.431 -4.652 -2.155 -3.662 1.265 H331 XVJ 96 XVJ H341 H46 H 0 0 N N N 9.999 9.353 -19.146 5.546 -5.870 3.885 H341 XVJ 97 XVJ H361 H47 H 0 0 N N N 4.525 -1.375 -14.227 -0.647 0.975 0.603 H361 XVJ 98 XVJ H401 H48 H 0 0 N N N 4.832 -1.103 -16.188 0.877 -1.581 -2.789 H401 XVJ 99 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal XVJ N37 C34 DOUB Y N 1 XVJ N37 C01 SING Y N 2 XVJ C34 S51 SING Y N 3 XVJ C01 C06 DOUB Y N 4 XVJ C01 C02 SING Y N 5 XVJ C27 C25 SING N N 6 XVJ C27 C26 SING N N 7 XVJ S51 C02 SING Y N 8 XVJ C06 C05 SING Y N 9 XVJ C02 C03 DOUB Y N 10 XVJ C07 C26 SING N N 11 XVJ C07 N35 SING N N 12 XVJ O40 C09 SING N N 13 XVJ C05 C04 DOUB Y N 14 XVJ C26 C28 SING N N 15 XVJ C08 C09 SING N N 16 XVJ C08 N35 SING N N 17 XVJ C03 C04 SING Y N 18 XVJ C04 S50 SING N N 19 XVJ C09 C10 SING N N 20 XVJ N35 S50 SING N N 21 XVJ S50 O38 DOUB N N 22 XVJ S50 O39 DOUB N N 23 XVJ C10 C18 SING N N 24 XVJ C10 N36 SING N N 25 XVJ C18 C19 SING N N 26 XVJ N36 C11 SING N N 27 XVJ C11 O42 SING N N 28 XVJ C11 O41 DOUB N N 29 XVJ C19 C20 DOUB Y N 30 XVJ C19 C24 SING Y N 31 XVJ O42 C12 SING N N 32 XVJ C20 C21 SING Y N 33 XVJ C13 O43 SING N N 34 XVJ C13 C12 SING N N 35 XVJ O43 C15 SING N N 36 XVJ C24 C23 DOUB Y N 37 XVJ C12 C14 SING N N 38 XVJ C17 O44 SING N N 39 XVJ C17 C16 SING N N 40 XVJ O44 C15 SING N N 41 XVJ C21 C22 DOUB Y N 42 XVJ C15 C14 SING N N 43 XVJ C14 C16 SING N N 44 XVJ C23 C22 SING Y N 45 XVJ C22 O45 SING N N 46 XVJ O45 C29 SING N N 47 XVJ C29 P49 SING N N 48 XVJ C31 C33 SING N N 49 XVJ C31 O47 SING N N 50 XVJ P49 O48 DOUB N N 51 XVJ P49 O47 SING N N 52 XVJ P49 O46 SING N N 53 XVJ O46 C30 SING N N 54 XVJ C30 C32 SING N N 55 XVJ C10 H101 SING N N 56 XVJ C13 H131 SING N N 57 XVJ C13 H132 SING N N 58 XVJ C15 H151 SING N N 59 XVJ C17 H171 SING N N 60 XVJ C17 H172 SING N N 61 XVJ C20 H201 SING N N 62 XVJ C21 H211 SING N N 63 XVJ C24 H241 SING N N 64 XVJ C26 H261 SING N N 65 XVJ C28 H283 SING N N 66 XVJ C28 H281 SING N N 67 XVJ C28 H282 SING N N 68 XVJ C03 H031 SING N N 69 XVJ C05 H051 SING N N 70 XVJ C06 H061 SING N N 71 XVJ C07 H071 SING N N 72 XVJ C07 H072 SING N N 73 XVJ C08 H081 SING N N 74 XVJ C08 H082 SING N N 75 XVJ C09 H091 SING N N 76 XVJ C12 H121 SING N N 77 XVJ C14 H141 SING N N 78 XVJ C16 H162 SING N N 79 XVJ C16 H161 SING N N 80 XVJ C18 H182 SING N N 81 XVJ C18 H181 SING N N 82 XVJ C23 H231 SING N N 83 XVJ C25 H253 SING N N 84 XVJ C25 H252 SING N N 85 XVJ C25 H251 SING N N 86 XVJ C27 H271 SING N N 87 XVJ C27 H272 SING N N 88 XVJ C29 H292 SING N N 89 XVJ C29 H291 SING N N 90 XVJ C30 H302 SING N N 91 XVJ C30 H301 SING N N 92 XVJ C31 H311 SING N N 93 XVJ C31 H312 SING N N 94 XVJ C32 H322 SING N N 95 XVJ C32 H321 SING N N 96 XVJ C32 H323 SING N N 97 XVJ C33 H333 SING N N 98 XVJ C33 H332 SING N N 99 XVJ C33 H331 SING N N 100 XVJ C34 H341 SING N N 101 XVJ N36 H361 SING N N 102 XVJ O40 H401 SING N N 103 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor XVJ SMILES ACDLabs 12.01 "C(Cc1ccc(OCP(OCC)(OCC)=O)cc1)(NC(OC2COC3C2CCO3)=O)C(CN(CC(C)CC)S(c4cc5c(cc4)ncs5)(=O)=O)O" XVJ InChI InChI 1.03 "InChI=1S/C34H48N3O11PS2/c1-5-23(4)18-37(51(41,42)26-12-13-28-32(17-26)50-21-35-28)19-30(38)29(36-34(39)48-31-20-44-33-27(31)14-15-43-33)16-24-8-10-25(11-9-24)45-22-49(40,46-6-2)47-7-3/h8-13,17,21,23,27,29-31,33,38H,5-7,14-16,18-20,22H2,1-4H3,(H,36,39)/t23-,27-,29-,30+,31-,33+/m0/s1" XVJ InChIKey InChI 1.03 PKQJSHMJDBCIKD-GJOHHWMHSA-N XVJ SMILES_CANONICAL CACTVS 3.385 "CCO[P](=O)(COc1ccc(C[C@H](NC(=O)O[C@H]2CO[C@H]3OCC[C@@H]23)[C@H](O)CN(C[C@@H](C)CC)[S](=O)(=O)c4ccc5ncsc5c4)cc1)OCC" XVJ SMILES CACTVS 3.385 "CCO[P](=O)(COc1ccc(C[CH](NC(=O)O[CH]2CO[CH]3OCC[CH]23)[CH](O)CN(C[CH](C)CC)[S](=O)(=O)c4ccc5ncsc5c4)cc1)OCC" XVJ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC[C@H](C)CN(C[C@H]([C@H](Cc1ccc(cc1)OCP(=O)(OCC)OCC)NC(=O)O[C@H]2CO[C@@H]3[C@H]2CCO3)O)S(=O)(=O)c4ccc5c(c4)scn5" XVJ SMILES "OpenEye OEToolkits" 2.0.7 "CCC(C)CN(CC(C(Cc1ccc(cc1)OCP(=O)(OCC)OCC)NC(=O)OC2COC3C2CCO3)O)S(=O)(=O)c4ccc5c(c4)scn5" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier XVJ "SYSTEMATIC NAME" ACDLabs 12.01 "diethyl [(4-{(2S,3R)-4-{[(1,3-benzothiazol-6-yl)sulfonyl][(2S)-2-methylbutyl]amino}-2-[({[(3R,3aS,6aR)-hexahydrofuro[2,3-b]furan-3-yl]oxy}carbonyl)amino]-3-hydroxybutyl}phenoxy)methyl]phosphonate" XVJ "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "[(3~{a}~{S},4~{R},6~{a}~{R})-2,3,3~{a},4,5,6~{a}-hexahydrofuro[2,3-b]furan-4-yl] ~{N}-[(2~{S},3~{R})-4-[1,3-benzothiazol-6-ylsulfonyl-[(2~{S})-2-methylbutyl]amino]-1-[4-(diethoxyphosphorylmethoxy)phenyl]-3-oxidanyl-butan-2-yl]carbamate" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site XVJ "Create component" 2021-01-15 RCSB XVJ "Initial release" 2022-01-26 RCSB ##