data_XW9 # _chem_comp.id XW9 _chem_comp.name "[5-{2-cyclopropyl-6-[(oxan-4-yl)methoxy]pyridine-4-carbonyl}-3,4,5,6-tetrahydropyrrolo[3,4-c]pyrrol-2(1H)-yl](3-hydroxy-4,7-dihydro[1,2]oxazolo[5,4-c]pyridin-6(5H)-yl)methanone" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C28 H33 N5 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-06-08 _chem_comp.pdbx_modified_date 2024-12-13 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 535.592 _chem_comp.one_letter_code ? _chem_comp.three_letter_code XW9 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7G2O _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal XW9 C11 C1 C 0 1 N N N N N N -14.356 9.947 49.726 0.395 0.564 -0.083 C11 XW9 1 XW9 C15 C2 C 0 1 Y N N N N N -13.028 7.061 46.008 3.024 0.978 0.099 C15 XW9 2 XW9 C16 C3 C 0 1 Y N N N N N -12.295 6.792 44.876 4.341 0.539 0.050 C16 XW9 3 XW9 C18 C4 C 0 1 N N N N N N -11.378 5.200 43.405 5.977 -1.177 -0.093 C18 XW9 4 XW9 C19 C5 C 0 1 N N N N N N -11.260 3.691 43.289 6.073 -2.700 -0.201 C19 XW9 5 XW9 C20 C6 C 0 1 N N N N N N -10.626 3.389 41.905 7.538 -3.111 -0.376 C20 XW9 6 XW9 C21 C7 C 0 1 N N N N N N -10.489 1.863 41.813 7.632 -4.638 -0.405 C21 XW9 7 XW9 C23 C8 C 0 1 N N N N N N -10.084 1.659 44.134 5.695 -4.860 0.992 C23 XW9 8 XW9 C24 C9 C 0 1 N N N N N N -10.323 3.150 44.371 5.523 -3.341 1.077 C24 XW9 9 XW9 C26 C10 C 0 1 Y N N N N N -11.914 9.047 44.456 5.141 2.701 0.191 C26 XW9 10 XW9 C27 C11 C 0 1 N N N N N N -11.261 10.006 43.542 6.324 3.634 0.236 C27 XW9 11 XW9 C28 C12 C 0 1 N N N N N N -10.039 9.556 42.715 6.793 4.244 -1.087 C28 XW9 12 XW9 N1 N1 N 0 1 N N N N N N -9.881 12.810 52.901 -5.492 -1.204 -0.947 N1 XW9 13 XW9 C2 C13 C 0 1 N N N N N N -11.233 12.539 52.767 -4.258 -1.697 -0.722 C2 XW9 14 XW9 O3 O1 O 0 1 N N N N N N -11.911 12.622 53.771 -4.082 -2.899 -0.680 O3 XW9 15 XW9 N4 N2 N 0 1 N N N N N N -11.788 12.159 51.528 -3.220 -0.857 -0.542 N4 XW9 16 XW9 C5 C14 C 0 1 N N N N N N -13.256 11.765 51.498 -1.798 -1.209 -0.461 C5 XW9 17 XW9 C6 C15 C 0 1 N N N N N N -13.318 10.792 50.374 -1.028 0.078 -0.256 C6 XW9 18 XW9 C7 C16 C 0 1 N N N N N N -12.118 10.625 49.824 -1.850 1.086 -0.214 C7 XW9 19 XW9 C8 C17 C 0 1 N N N N N N -11.028 11.430 50.457 -3.273 0.601 -0.387 C8 XW9 20 XW9 C9 C18 C 0 1 N N N N N N -12.150 9.678 48.716 -1.081 2.373 -0.009 C9 XW9 21 XW9 N10 N3 N 0 1 N N N N N N -13.628 9.605 48.488 0.345 2.022 0.069 N10 XW9 22 XW9 C12 C19 C 0 1 N N N N N N -14.094 8.829 47.452 1.383 2.862 0.248 C12 XW9 23 XW9 O13 O2 O 0 1 N N N N N N -15.274 8.471 47.449 1.181 4.043 0.454 O13 XW9 24 XW9 C14 C20 C 0 1 Y N N N N N -13.209 8.402 46.334 2.771 2.347 0.193 C14 XW9 25 XW9 O17 O3 O 0 1 N N N N N N -12.091 5.471 44.599 4.603 -0.788 -0.047 O17 XW9 26 XW9 O22 O4 O 0 1 N N N N N N -9.603 1.386 42.835 7.077 -5.171 0.799 O22 XW9 27 XW9 N25 N4 N 0 1 Y N N N N N -11.750 7.749 44.097 5.342 1.401 0.097 N25 XW9 28 XW9 C29 C21 C 0 1 N N N N N N -11.371 9.878 42.042 6.068 5.114 -0.057 C29 XW9 29 XW9 C30 C22 C 0 1 Y N N N N N -12.633 9.432 45.561 3.864 3.221 0.234 C30 XW9 30 XW9 C31 C23 C 0 1 N N N N N N -9.168 12.784 54.218 -5.758 0.242 -0.836 C31 XW9 31 XW9 C32 C24 C 0 1 Y N N N N N -7.713 12.507 53.957 -7.048 0.401 -0.073 C32 XW9 32 XW9 C33 C25 C 0 1 Y N N N N N -7.089 12.643 52.727 -7.885 -0.627 0.201 C33 XW9 33 XW9 C34 C26 C 0 1 N N N N N N -7.821 13.012 51.473 -7.665 -2.056 -0.199 C34 XW9 34 XW9 C35 C27 C 0 1 N N N N N N -9.185 13.670 51.872 -6.602 -2.096 -1.314 C35 XW9 35 XW9 C36 C28 C 0 1 Y N N N N N -5.697 12.322 53.052 -8.945 -0.036 0.914 C36 XW9 36 XW9 N37 N5 N 0 1 Y N N N N N -5.569 11.999 54.381 -8.653 1.240 0.998 N37 XW9 37 XW9 O38 O5 O 0 1 Y N N N N N -6.800 12.118 54.918 -7.598 1.493 0.453 O38 XW9 38 XW9 O39 O6 O 0 1 N N N N N N -4.716 12.377 52.142 -10.044 -0.658 1.411 O39 XW9 39 XW9 H46 H1 H 0 1 N N N N N N -14.596 9.056 50.324 0.835 0.112 0.805 H46 XW9 40 XW9 H47 H2 H 0 1 N N N N N N -15.278 10.510 49.521 0.984 0.303 -0.962 H47 XW9 41 XW9 H48 H3 H 0 1 N N N N N N -13.443 6.270 46.615 2.209 0.271 0.060 H48 XW9 42 XW9 H50 H4 H 0 1 N N N N N N -11.924 5.604 42.540 6.479 -0.846 0.816 H50 XW9 43 XW9 H49 H5 H 0 1 N N N N N N -10.377 5.654 43.452 6.455 -0.720 -0.959 H49 XW9 44 XW9 H51 H6 H 0 1 N N N N N N -12.250 3.217 43.365 5.494 -3.042 -1.060 H51 XW9 45 XW9 H53 H7 H 0 1 N N N N N N -11.276 3.762 41.100 7.921 -2.704 -1.312 H53 XW9 46 XW9 H52 H8 H 0 1 N N N N N N -9.637 3.865 41.828 8.126 -2.725 0.457 H52 XW9 47 XW9 H54 H9 H 0 1 N N N N N N -11.478 1.400 41.944 7.078 -5.021 -1.262 H54 XW9 48 XW9 H55 H10 H 0 1 N N N N N N -10.085 1.593 40.826 8.678 -4.936 -0.486 H55 XW9 49 XW9 H57 H11 H 0 1 N N N N N N -11.034 1.123 44.278 5.345 -5.318 1.917 H57 XW9 50 XW9 H56 H12 H 0 1 N N N N N N -9.345 1.300 44.866 5.115 -5.245 0.154 H56 XW9 51 XW9 H59 H13 H 0 1 N N N N N N -9.364 3.687 44.328 6.070 -2.960 1.939 H59 XW9 52 XW9 H58 H14 H 0 1 N N N N N N -10.781 3.296 45.360 4.465 -3.099 1.180 H58 XW9 53 XW9 H60 H15 H 0 1 N N N N N N -11.198 11.040 43.912 7.087 3.392 0.976 H60 XW9 54 XW9 H62 H16 H 0 1 N N N N N N -9.178 10.229 42.589 7.863 4.404 -1.217 H62 XW9 55 XW9 H61 H17 H 0 1 N N N N N N -9.685 8.516 42.772 6.245 3.971 -1.989 H61 XW9 56 XW9 H40 H18 H 0 1 N N N N N N -13.559 11.295 52.445 -1.629 -1.880 0.382 H40 XW9 57 XW9 H41 H19 H 0 1 N N N N N N -13.896 12.638 51.301 -1.480 -1.687 -1.387 H41 XW9 58 XW9 H43 H20 H 0 1 N N N N N N -10.574 12.128 49.739 -3.713 1.052 -1.276 H43 XW9 59 XW9 H42 H21 H 0 1 N N N N N N -10.247 10.785 50.885 -3.863 0.859 0.493 H42 XW9 60 XW9 H45 H22 H 0 1 N N N N N N -11.618 10.063 47.833 -1.250 3.044 -0.851 H45 XW9 61 XW9 H44 H23 H 0 1 N N N N N N -11.731 8.701 49.000 -1.398 2.851 0.918 H44 XW9 62 XW9 H64 H24 H 0 1 N N N N N N -11.973 9.068 41.605 5.044 5.412 -0.282 H64 XW9 63 XW9 H63 H25 H 0 1 N N N N N N -11.466 10.781 41.421 6.662 5.845 0.490 H63 XW9 64 XW9 H65 H26 H 0 1 N N N N N N -12.752 10.472 45.825 3.709 4.287 0.312 H65 XW9 65 XW9 H66 H27 H 0 1 N N N N N N -9.278 13.756 54.721 -4.945 0.729 -0.297 H66 XW9 66 XW9 H67 H28 H 0 1 N N N N N N -9.590 11.992 54.855 -5.858 0.679 -1.830 H67 XW9 67 XW9 H68 H29 H 0 1 N N N N N N -7.221 13.726 50.889 -7.317 -2.627 0.661 H68 XW9 68 XW9 H69 H30 H 0 1 N N N N N N -8.006 12.110 50.872 -8.598 -2.480 -0.570 H69 XW9 69 XW9 H71 H31 H 0 1 N N N N N N -9.822 13.761 50.980 -7.043 -1.762 -2.254 H71 XW9 70 XW9 H70 H32 H 0 1 N N N N N N -9.000 14.669 52.294 -6.229 -3.114 -1.428 H70 XW9 71 XW9 H72 H33 H 0 1 N N N N N N -3.889 12.155 52.553 -9.935 -0.987 2.314 H72 XW9 72 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal XW9 N1 C2 SING N N 1 XW9 N1 C31 SING N N 2 XW9 N1 C35 SING N N 3 XW9 C2 O3 DOUB N N 4 XW9 C2 N4 SING N N 5 XW9 N4 C5 SING N N 6 XW9 N4 C8 SING N N 7 XW9 C5 C6 SING N N 8 XW9 C6 C7 DOUB N N 9 XW9 C6 C11 SING N N 10 XW9 C7 C8 SING N N 11 XW9 C7 C9 SING N N 12 XW9 C9 N10 SING N N 13 XW9 N10 C11 SING N N 14 XW9 N10 C12 SING N N 15 XW9 C12 O13 DOUB N N 16 XW9 C12 C14 SING N N 17 XW9 C14 C15 DOUB Y N 18 XW9 C14 C30 SING Y N 19 XW9 C15 C16 SING Y N 20 XW9 C16 O17 SING N N 21 XW9 C16 N25 DOUB Y N 22 XW9 O17 C18 SING N N 23 XW9 C18 C19 SING N N 24 XW9 C19 C20 SING N N 25 XW9 C19 C24 SING N N 26 XW9 C20 C21 SING N N 27 XW9 C21 O22 SING N N 28 XW9 O22 C23 SING N N 29 XW9 C23 C24 SING N N 30 XW9 N25 C26 SING Y N 31 XW9 C26 C27 SING N N 32 XW9 C26 C30 DOUB Y N 33 XW9 C27 C28 SING N N 34 XW9 C27 C29 SING N N 35 XW9 C28 C29 SING N N 36 XW9 C31 C32 SING N N 37 XW9 C32 C33 DOUB Y N 38 XW9 C32 O38 SING Y N 39 XW9 C33 C34 SING N N 40 XW9 C33 C36 SING Y N 41 XW9 C34 C35 SING N N 42 XW9 C36 N37 DOUB Y N 43 XW9 C36 O39 SING N N 44 XW9 N37 O38 SING Y N 45 XW9 C11 H46 SING N N 46 XW9 C11 H47 SING N N 47 XW9 C15 H48 SING N N 48 XW9 C18 H50 SING N N 49 XW9 C18 H49 SING N N 50 XW9 C19 H51 SING N N 51 XW9 C20 H53 SING N N 52 XW9 C20 H52 SING N N 53 XW9 C21 H54 SING N N 54 XW9 C21 H55 SING N N 55 XW9 C23 H57 SING N N 56 XW9 C23 H56 SING N N 57 XW9 C24 H59 SING N N 58 XW9 C24 H58 SING N N 59 XW9 C27 H60 SING N N 60 XW9 C28 H62 SING N N 61 XW9 C28 H61 SING N N 62 XW9 C5 H40 SING N N 63 XW9 C5 H41 SING N N 64 XW9 C8 H43 SING N N 65 XW9 C8 H42 SING N N 66 XW9 C9 H45 SING N N 67 XW9 C9 H44 SING N N 68 XW9 C29 H64 SING N N 69 XW9 C29 H63 SING N N 70 XW9 C30 H65 SING N N 71 XW9 C31 H66 SING N N 72 XW9 C31 H67 SING N N 73 XW9 C34 H68 SING N N 74 XW9 C34 H69 SING N N 75 XW9 C35 H71 SING N N 76 XW9 C35 H70 SING N N 77 XW9 O39 H72 SING N N 78 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor XW9 SMILES ACDLabs 12.01 "O=C(c1cc(nc(OCC2CCOCC2)c1)C1CC1)N1CC=2CN(CC=2C1)C(=O)N1Cc2onc(O)c2CC1" XW9 InChI InChI 1.06 "InChI=1S/C28H33N5O6/c34-26-22-3-6-31(15-24(22)39-30-26)28(36)33-13-20-11-32(12-21(20)14-33)27(35)19-9-23(18-1-2-18)29-25(10-19)38-16-17-4-7-37-8-5-17/h9-10,17-18H,1-8,11-16H2,(H,30,34)" XW9 InChIKey InChI 1.06 IFTRMTXDKJQHOD-UHFFFAOYSA-N XW9 SMILES_CANONICAL CACTVS 3.385 "Oc1noc2CN(CCc12)C(=O)N3CC4=C(C3)CN(C4)C(=O)c5cc(OCC6CCOCC6)nc(c5)C7CC7" XW9 SMILES CACTVS 3.385 "Oc1noc2CN(CCc12)C(=O)N3CC4=C(C3)CN(C4)C(=O)c5cc(OCC6CCOCC6)nc(c5)C7CC7" XW9 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1c(cc(nc1C2CC2)OCC3CCOCC3)C(=O)N4CC5=C(C4)CN(C5)C(=O)N6CCc7c(onc7O)C6" XW9 SMILES "OpenEye OEToolkits" 2.0.7 "c1c(cc(nc1C2CC2)OCC3CCOCC3)C(=O)N4CC5=C(C4)CN(C5)C(=O)N6CCc7c(onc7O)C6" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier XW9 "SYSTEMATIC NAME" ACDLabs 12.01 "[5-{2-cyclopropyl-6-[(oxan-4-yl)methoxy]pyridine-4-carbonyl}-3,4,5,6-tetrahydropyrrolo[3,4-c]pyrrol-2(1H)-yl](3-hydroxy-4,7-dihydro[1,2]oxazolo[5,4-c]pyridin-6(5H)-yl)methanone" XW9 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "[2-cyclopropyl-6-(oxan-4-ylmethoxy)pyridin-4-yl]-[5-[(3-oxidanyl-5,7-dihydro-4~{H}-[1,2]oxazolo[5,4-c]pyridin-6-yl)carbonyl]-1,3,4,6-tetrahydropyrrolo[3,4-c]pyrrol-2-yl]methanone" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site XW9 "Create component" 2023-06-08 RCSB XW9 "Initial release" 2024-12-18 RCSB #